RNA–Protein interactions for RNA: ENST00000505450.5

PROM1-206, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PROM1, Length 4,349 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-206ENST00000505450 CARMIL2Q6F5E8 1435 aa10.58□□□□□ -0.71
PROM1-206ENST00000505450 GGT6Q6P531 493 aa10.58□□□□□ -0.72
PROM1-206ENST00000505450 IL27Q8NEV9 243 aa10.57□□□□□ -0.72
PROM1-206ENST00000505450 ERICH3Q5RHP9 1530 aa10.57□□□□□ -0.72
PROM1-206ENST00000505450 PPM1GO15355 546 aaPredicted RBP10.57□□□□□ -0.72
PROM1-206ENST00000505450 FMN1Q68DA7 1419 aa10.57□□□□□ -0.72
PROM1-206ENST00000505450 CARD11Q9BXL7 1154 aa10.57□□□□□ -0.72
PROM1-206ENST00000505450 C11orf95C9JLR9 678 aaPredicted RBP10.56□□□□□ -0.72
PROM1-206ENST00000505450 EXOC6Q8TAG9 804 aa10.55□□□□□ -0.72
PROM1-206ENST00000505450 AKNAQ7Z591 1439 aa10.55□□□□□ -0.72
PROM1-206ENST00000505450 SLC4A3P48751 1232 aa10.54□□□□□ -0.72
PROM1-206ENST00000505450 RGS3P49796 1198 aa10.54□□□□□ -0.72
PROM1-206ENST00000505450 RGL3Q3MIN7 710 aa10.54□□□□□ -0.72
PROM1-206ENST00000505450 RCAN3Q9UKA8 241 aa10.54□□□□□ -0.72
PROM1-206ENST00000505450 CCDC7Q96M83 1385 aa10.54□□□□□ -0.72
PROM1-206ENST00000505450 TOP2BQ02880 1626 aa10.53□□□□□ -0.72
PROM1-206ENST00000505450 PTPRGP23470 1445 aa10.53□□□□□ -0.72
PROM1-206ENST00000505450 KIF7Q2M1P5 1343 aa10.53□□□□□ -0.72
PROM1-206ENST00000505450 PDE4AP27815 886 aa10.53□□□□□ -0.72
PROM1-206ENST00000505450 CFDP1Q9UEE9 299 aaPredicted RBP10.53□□□□□ -0.72
PROM1-206ENST00000505450 UACAQ9BZF9 1416 aa10.53□□□□□ -0.72
PROM1-206ENST00000505450 FGD6Q6ZV73 1430 aa10.52□□□□□ -0.72
PROM1-206ENST00000505450 PLIN1O60240 522 aa10.52□□□□□ -0.73
PROM1-206ENST00000505450 DDRGK1Q96HY6 314 aa10.52□□□□□ -0.73
PROM1-206ENST00000505450 CNTLNQ9NXG0 1405 aa10.52□□□□□ -0.73
PROM1-206ENST00000505450 A0A0G2JS52 829 aa10.52□□□□□ -0.73
PROM1-206ENST00000505450 PRKCSHP14314 528 aaPredicted RBP10.52□□□□□ -0.73
PROM1-206ENST00000505450 CANXP27824 592 aaKnown RBP10.52□□□□□ -0.73
PROM1-206ENST00000505450 CC2D1BQ5T0F9 858 aaKnown RBP10.52□□□□□ -0.73
PROM1-206ENST00000505450 TCERG1O14776 1098 aaKnown RBP10.51□□□□□ -0.73
PROM1-206ENST00000505450 TIAM1Q13009 1591 aa10.51□□□□□ -0.73
PROM1-206ENST00000505450 NBPF8Q3BBV2 869 aa10.51□□□□□ -0.73
PROM1-206ENST00000505450 CUX1P39880 1505 aa10.49□□□□□ -0.73
PROM1-206ENST00000505450 GAPVD1Q14C86 1478 aa10.48□□□□□ -0.73
PROM1-206ENST00000505450 PKD2Q13563 968 aa10.48□□□□□ -0.73
PROM1-206ENST00000505450 DCAF11Q8TEB1 546 aa10.48□□□□□ -0.73
PROM1-206ENST00000505450 HAP1P54257 671 aaPredicted RBP10.47□□□□□ -0.73
PROM1-206ENST00000505450 FGD5Q6ZNL6 1462 aa10.47□□□□□ -0.73
PROM1-206ENST00000505450 RRP1P56182 461 aaKnown RBP10.47□□□□□ -0.73
PROM1-206ENST00000505450 WDR43Q15061 677 aaKnown RBP eCLIP10.47□□□□□ -0.73
PROM1-206ENST00000505450 UNC13AQ9UPW8 1703 aa10.46□□□□□ -0.74
PROM1-206ENST00000505450 SKAP1Q86WV1 359 aa10.46□□□□□ -0.74
PROM1-206ENST00000505450 ST20-MTHFSA0A0A6YYL1 179 aa10.44□□□□□ -0.74
PROM1-206ENST00000505450 BRPF3Q9ULD4 1205 aa10.44□□□□□ -0.74
PROM1-206ENST00000505450 EFCAB2Q5VUJ9 269 aa10.44□□□□□ -0.74
PROM1-206ENST00000505450 LMOD2Q6P5Q4 547 aa10.44□□□□□ -0.74
PROM1-206ENST00000505450 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.44□□□□□ -0.74
PROM1-206ENST00000505450 IFT140Q96RY7 1462 aa10.43□□□□□ -0.74
PROM1-206ENST00000505450 CDCA7LQ96GN5 454 aa10.43□□□□□ -0.74
PROM1-206ENST00000505450 HFM1A2PYH4 1435 aa10.42□□□□□ -0.74
PROM1-206ENST00000505450 NAIPQ13075 1403 aa10.42□□□□□ -0.74
PROM1-206ENST00000505450 ZNF644Q9H582 1327 aaPredicted RBP10.42□□□□□ -0.74
PROM1-206ENST00000505450 CRBNQ96SW2 442 aa10.42□□□□□ -0.74
PROM1-206ENST00000505450 CFTRP13569 1480 aa10.42□□□□□ -0.74
PROM1-206ENST00000505450 MYOM3Q5VTT5 1437 aa10.42□□□□□ -0.74
PROM1-206ENST00000505450 USP47Q96K76 1375 aa10.41□□□□□ -0.74
PROM1-206ENST00000505450 PRG4Q92954 1404 aaPredicted RBP10.41□□□□□ -0.74
PROM1-206ENST00000505450 GSE1Q14687 1217 aa10.41□□□□□ -0.74
PROM1-206ENST00000505450 USP35Q9P2H5 1018 aa10.41□□□□□ -0.74
PROM1-206ENST00000505450 HMGXB3Q12766 1538 aa10.41□□□□□ -0.74
PROM1-206ENST00000505450 PNISRQ8TF01 805 aaKnown RBP10.4□□□□□ -0.74
PROM1-206ENST00000505450 CASKIN1Q8WXD9 1431 aa10.4□□□□□ -0.74
PROM1-206ENST00000505450 NCOA2Q15596 1464 aa10.4□□□□□ -0.74
PROM1-206ENST00000505450 PTPRKQ15262 1439 aa10.4□□□□□ -0.74
PROM1-206ENST00000505450 ZNF608Q9ULD9 1512 aaPredicted RBP10.4□□□□□ -0.74
PROM1-206ENST00000505450 ZBTB7CA1YPR0 619 aa10.39□□□□□ -0.75
PROM1-206ENST00000505450 SLKQ9H2G2 1235 aaPredicted RBP10.39□□□□□ -0.75
PROM1-206ENST00000505450 GRIN2BQ13224 1484 aa10.39□□□□□ -0.75
PROM1-206ENST00000505450 RALBP1Q15311 655 aa10.39□□□□□ -0.75
PROM1-206ENST00000505450 PHF23Q9BUL5 403 aaPredicted RBP10.39□□□□□ -0.75
PROM1-206ENST00000505450 SNAPC4Q5SXM2 1469 aa10.39□□□□□ -0.75
PROM1-206ENST00000505450 NFKBIBQ15653 356 aa10.39□□□□□ -0.75
PROM1-206ENST00000505450 NLRP13Q86W25 1043 aa10.39□□□□□ -0.75
PROM1-206ENST00000505450 UPF2Q9HAU5 1272 aaKnown RBP10.39□□□□□ -0.75
PROM1-206ENST00000505450 SMG6Q86US8 1419 aaKnown RBP10.38□□□□□ -0.75
PROM1-206ENST00000505450 LAMC3Q9Y6N6 1575 aa10.38□□□□□ -0.75
PROM1-206ENST00000505450 BACH2Q9BYV9 841 aa10.38□□□□□ -0.75
PROM1-206ENST00000505450 SPRYD3Q8NCJ5 442 aa10.38□□□□□ -0.75
PROM1-206ENST00000505450 NEUROD2Q15784 382 aa10.38□□□□□ -0.75
PROM1-206ENST00000505450 MYBBP1AQ9BQG0 1328 aaKnown RBP10.38□□□□□ -0.75
PROM1-206ENST00000505450 PCF11O94913 1555 aaKnown RBP10.38□□□□□ -0.75
PROM1-206ENST00000505450 TOPBP1Q92547 1522 aa10.37□□□□□ -0.75
PROM1-206ENST00000505450 KTN1Q86UP2 1357 aaKnown RBP10.37□□□□□ -0.75
PROM1-206ENST00000505450 FRAT1Q92837 279 aaPredicted RBP10.36□□□□□ -0.75
PROM1-206ENST00000505450 KNSTRNQ9Y448 316 aa10.36□□□□□ -0.75
PROM1-206ENST00000505450 SLC24A1O60721 1099 aa10.36□□□□□ -0.75
PROM1-206ENST00000505450 RAPGEF3O95398 923 aa10.36□□□□□ -0.75
PROM1-206ENST00000505450 MS4A1P11836 297 aa10.36□□□□□ -0.75
PROM1-206ENST00000505450 KIF15Q9NS87 1388 aa10.35□□□□□ -0.75
PROM1-206ENST00000505450 FYCO1Q9BQS8 1478 aa10.35□□□□□ -0.75
PROM1-206ENST00000505450 BECN1Q14457 450 aa10.35□□□□□ -0.75
PROM1-206ENST00000505450 NUP155O75694 1391 aa10.35□□□□□ -0.75
PROM1-206ENST00000505450 PDE3BQ13370 1112 aa10.34□□□□□ -0.75
PROM1-206ENST00000505450 KIF3BO15066 747 aa10.34□□□□□ -0.75
PROM1-206ENST00000505450 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.34□□□□□ -0.75
PROM1-206ENST00000505450 MAP3K1Q13233 1512 aa10.34□□□□□ -0.75
PROM1-206ENST00000505450 NAP1L5Q96NT1 182 aaPredicted RBP10.34□□□□□ -0.75
PROM1-206ENST00000505450 GZF1Q9H116 711 aaPredicted RBP10.34□□□□□ -0.75
PROM1-206ENST00000505450 NCOA1Q15788 1441 aa10.33□□□□□ -0.76
PROM1-206ENST00000505450 POLA1P09884 1462 aaPredicted RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms