RNA–Protein interactions for RNA: ENST00000505392.5

CCHCR1-219, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 547 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-219ENST00000505392 SIGLEC1Q9BZZ2 1709 aa19.46■□□□□ 0.71
CCHCR1-219ENST00000505392 CFAP74Q9C0B2 1584 aa19.46■□□□□ 0.71
CCHCR1-219ENST00000505392 HECW1Q76N89 1606 aa19.46■□□□□ 0.71
CCHCR1-219ENST00000505392 PLCH2O75038 1416 aa19.45■□□□□ 0.7
CCHCR1-219ENST00000505392 ATP1B4Q9UN42 357 aaPredicted RBP19.45■□□□□ 0.7
CCHCR1-219ENST00000505392 ATP10AO60312 1499 aa19.44■□□□□ 0.7
CCHCR1-219ENST00000505392 EFCAB2Q5VUJ9 269 aa19.44■□□□□ 0.7
CCHCR1-219ENST00000505392 TTC37Q6PGP7 1564 aa19.43■□□□□ 0.7
CCHCR1-219ENST00000505392 MYT1LQ9UL68 1186 aa19.41■□□□□ 0.7
CCHCR1-219ENST00000505392 AFAP1Q8N556 730 aa19.4■□□□□ 0.7
CCHCR1-219ENST00000505392 C9orf84Q5VXU9 1444 aa19.4■□□□□ 0.7
CCHCR1-219ENST00000505392 ARHGEF12Q9NZN5 1544 aa19.39■□□□□ 0.69
CCHCR1-219ENST00000505392 FER1L4A9Z1Z3 1794 aa19.39■□□□□ 0.69
CCHCR1-219ENST00000505392 CDK13Q14004 1512 aaKnown RBP19.37■□□□□ 0.69
CCHCR1-219ENST00000505392 CDK11AQ9UQ88 783 aaPredicted RBP19.36■□□□□ 0.69
CCHCR1-219ENST00000505392 UHRF1BP1Q6BDS2 1440 aa19.35■□□□□ 0.69
CCHCR1-219ENST00000505392 EEA1Q15075 1411 aa19.34■□□□□ 0.69
CCHCR1-219ENST00000505392 ESF1Q9H501 851 aaKnown RBP19.32■□□□□ 0.68
CCHCR1-219ENST00000505392 PREX1Q8TCU6 1659 aa19.32■□□□□ 0.68
CCHCR1-219ENST00000505392 EHMT2Q96KQ7 1210 aa19.31■□□□□ 0.68
CCHCR1-219ENST00000505392 STRCQ7RTU9 1775 aa19.3■□□□□ 0.68
CCHCR1-219ENST00000505392 PTPRTO14522 1441 aa19.29■□□□□ 0.68
CCHCR1-219ENST00000505392 ZNF518AQ6AHZ1 1483 aa19.28■□□□□ 0.68
CCHCR1-219ENST00000505392 UBTFP17480 764 aaKnown RBP19.28■□□□□ 0.68
CCHCR1-219ENST00000505392 SETD1BQ9UPS6 1966 aaKnown RBP19.27■□□□□ 0.68
CCHCR1-219ENST00000505392 FMN1Q68DA7 1419 aa19.24■□□□□ 0.67
CCHCR1-219ENST00000505392 TRAPPC8Q9Y2L5 1435 aa19.24■□□□□ 0.67
CCHCR1-219ENST00000505392 ARHGAP5Q13017 1502 aa19.23■□□□□ 0.67
CCHCR1-219ENST00000505392 TROQ12816 1431 aaPredicted RBP19.21■□□□□ 0.67
CCHCR1-219ENST00000505392 MYO5CQ9NQX4 1742 aa19.2■□□□□ 0.66
CCHCR1-219ENST00000505392 KDM5CP41229 1560 aa19.19■□□□□ 0.66
CCHCR1-219ENST00000505392 MLH3Q9UHC1 1453 aa19.19■□□□□ 0.66
CCHCR1-219ENST00000505392 SPATA31D1Q6ZQQ2 1576 aa19.19■□□□□ 0.66
CCHCR1-219ENST00000505392 KIF14Q15058 1648 aa19.18■□□□□ 0.66
CCHCR1-219ENST00000505392 LTBP4Q8N2S1 1624 aa19.18■□□□□ 0.66
CCHCR1-219ENST00000505392 CLIP1P30622 1438 aa19.18■□□□□ 0.66
CCHCR1-219ENST00000505392 DIP2CQ9Y2E4 1556 aa19.18■□□□□ 0.66
CCHCR1-219ENST00000505392 NCKAP5LQ9HCH0 1330 aa19.16■□□□□ 0.66
CCHCR1-219ENST00000505392 NCOA1Q15788 1441 aa19.16■□□□□ 0.66
CCHCR1-219ENST00000505392 C3P01024 1663 aa19.15■□□□□ 0.66
CCHCR1-219ENST00000505392 UBAP1LF5GYI3 381 aa19.15■□□□□ 0.66
CCHCR1-219ENST00000505392 ARHGAP35Q9NRY4 1499 aa19.15■□□□□ 0.66
CCHCR1-219ENST00000505392 REREQ9P2R6 1566 aa19.15■□□□□ 0.66
CCHCR1-219ENST00000505392 AGLP35573 1532 aa19.14■□□□□ 0.65
CCHCR1-219ENST00000505392 CNTLNQ9NXG0 1405 aa19.13■□□□□ 0.65
CCHCR1-219ENST00000505392 IQSEC2Q5JU85 1478 aa19.13■□□□□ 0.65
CCHCR1-219ENST00000505392 ZMYM3Q14202 1370 aa19.12■□□□□ 0.65
CCHCR1-219ENST00000505392 ZNF335Q9H4Z2 1342 aaPredicted RBP19.12■□□□□ 0.65
CCHCR1-219ENST00000505392 ABCA6Q8N139 1617 aa19.11■□□□□ 0.65
CCHCR1-219ENST00000505392 ZNF777Q9ULD5 760 aaPredicted RBP19.11■□□□□ 0.65
CCHCR1-219ENST00000505392 CAMSAP1Q5T5Y3 1602 aa19.07■□□□□ 0.64
CCHCR1-219ENST00000505392 PKD2Q13563 968 aa19.07■□□□□ 0.64
CCHCR1-219ENST00000505392 NPATQ14207 1427 aa19.07■□□□□ 0.64
CCHCR1-219ENST00000505392 CDC42BPBQ9Y5S2 1711 aa19.06■□□□□ 0.64
CCHCR1-219ENST00000505392 HNRNPMP52272 730 aaKnown RBP eCLIP19.06■□□□□ 0.64
CCHCR1-219ENST00000505392 ABCC1P33527 1531 aa19.05■□□□□ 0.64
CCHCR1-219ENST00000505392 SPAG9O60271 1321 aaKnown RBP19.04■□□□□ 0.64
CCHCR1-219ENST00000505392 GGT6Q6P531 493 aa19.03■□□□□ 0.64
CCHCR1-219ENST00000505392 KIDINS220Q9ULH0 1771 aa19.02■□□□□ 0.64
CCHCR1-219ENST00000505392 PPP6R1Q9UPN7 881 aa19■□□□□ 0.63
CCHCR1-219ENST00000505392 PREX2Q70Z35 1606 aa18.99■□□□□ 0.63
CCHCR1-219ENST00000505392 SCAF1Q9H7N4 1312 aaKnown RBP18.99■□□□□ 0.63
CCHCR1-219ENST00000505392 ITSN2Q9NZM3 1697 aa18.98■□□□□ 0.63
CCHCR1-219ENST00000505392 LRRIQ1Q96JM4 1722 aa18.97■□□□□ 0.63
CCHCR1-219ENST00000505392 HSPA1LP34931 641 aa18.97■□□□□ 0.63
CCHCR1-219ENST00000505392 PIP4K2BP78356 416 aa18.97■□□□□ 0.63
CCHCR1-219ENST00000505392 CASKIN1Q8WXD9 1431 aa18.97■□□□□ 0.63
CCHCR1-219ENST00000505392 SAMD9LQ8IVG5 1584 aa18.97■□□□□ 0.63
CCHCR1-219ENST00000505392 PLA2R1Q13018 1463 aa18.96■□□□□ 0.63
CCHCR1-219ENST00000505392 CCDC18Q5T9S5 1454 aa18.96■□□□□ 0.63
CCHCR1-219ENST00000505392 PTPRKQ15262 1439 aa18.95■□□□□ 0.62
CCHCR1-219ENST00000505392 CFDP1Q9UEE9 299 aaPredicted RBP18.95■□□□□ 0.62
CCHCR1-219ENST00000505392 TOM1O60784 492 aa18.94■□□□□ 0.62
CCHCR1-219ENST00000505392 MROH2AA6NES4 1674 aa18.93■□□□□ 0.62
CCHCR1-219ENST00000505392 TCOF1Q13428 1488 aaKnown RBP18.93■□□□□ 0.62
CCHCR1-219ENST00000505392 GPATCH8Q9UKJ3 1502 aaKnown RBP18.93■□□□□ 0.62
CCHCR1-219ENST00000505392 A2MP01023 1474 aa18.92■□□□□ 0.62
CCHCR1-219ENST00000505392 SUPT6HQ7KZ85 1726 aaKnown RBP18.91■□□□□ 0.62
CCHCR1-219ENST00000505392 SYCP2Q9BX26 1530 aa18.9■□□□□ 0.62
CCHCR1-219ENST00000505392 CDC42BPAQ5VT25 1732 aa18.9■□□□□ 0.62
CCHCR1-219ENST00000505392 KIAA1107Q9UPP5 1409 aa18.9■□□□□ 0.62
CCHCR1-219ENST00000505392 CEP170BQ9Y4F5 1589 aaPredicted RBP18.89■□□□□ 0.61
CCHCR1-219ENST00000505392 CLTCQ00610 1675 aaKnown RBP18.89■□□□□ 0.61
CCHCR1-219ENST00000505392 ATP7AQ04656 1500 aa18.87■□□□□ 0.61
CCHCR1-219ENST00000505392 FBXO31Q5XUX0 539 aaPredicted RBP18.87■□□□□ 0.61
CCHCR1-219ENST00000505392 MYO3AQ8NEV4 1616 aa18.86■□□□□ 0.61
CCHCR1-219ENST00000505392 CCNB3Q8WWL7 1395 aa18.86■□□□□ 0.61
CCHCR1-219ENST00000505392 CHIC1Q5VXU3 224 aa18.86■□□□□ 0.61
CCHCR1-219ENST00000505392 A2ML1A8K2U0 1454 aa18.84■□□□□ 0.61
CCHCR1-219ENST00000505392 PLEKHH2Q8IVE3 1493 aa18.84■□□□□ 0.61
CCHCR1-219ENST00000505392 ZNF644Q9H582 1327 aaPredicted RBP18.84■□□□□ 0.61
CCHCR1-219ENST00000505392 ANKLE2Q86XL3 938 aa18.84■□□□□ 0.61
CCHCR1-219ENST00000505392 PHF23Q9BUL5 403 aaPredicted RBP18.84■□□□□ 0.61
CCHCR1-219ENST00000505392 ZNF142P52746 1687 aaPredicted RBP18.83■□□□□ 0.61
CCHCR1-219ENST00000505392 PLXNC1O60486 1568 aa18.83■□□□□ 0.6
CCHCR1-219ENST00000505392 KIF3BO15066 747 aa18.81■□□□□ 0.6
CCHCR1-219ENST00000505392 SHANK2Q9UPX8 1470 aa18.81■□□□□ 0.6
CCHCR1-219ENST00000505392 FYCO1Q9BQS8 1478 aa18.8■□□□□ 0.6
CCHCR1-219ENST00000505392 THEMISQ8N1K5 641 aaPredicted RBP18.8■□□□□ 0.6
CCHCR1-219ENST00000505392 DNMT1P26358 1616 aaKnown RBP18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 172.8 ms