RNA–Protein interactions for RNA: ENST00000504884.6

SNCAIP-207, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 1,885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-207ENST00000504884 ITSN2Q9NZM3 1697 aa22.22■■□□□ 1.15
SNCAIP-207ENST00000504884 PPP1R15AO75807 674 aaPredicted RBP22.22■■□□□ 1.15
SNCAIP-207ENST00000504884 TRIM52Q96A61 297 aa22.2■■□□□ 1.14
SNCAIP-207ENST00000504884 SHROOM2Q13796 1616 aa22.18■■□□□ 1.14
SNCAIP-207ENST00000504884 KIF14Q15058 1648 aa22.18■■□□□ 1.14
SNCAIP-207ENST00000504884 CAMSAP2Q08AD1 1489 aa22.17■■□□□ 1.14
SNCAIP-207ENST00000504884 TONSLQ96HA7 1378 aa22.17■■□□□ 1.14
SNCAIP-207ENST00000504884 CENPBP07199 599 aaPredicted RBP22.15■■□□□ 1.14
SNCAIP-207ENST00000504884 KDM6BO15054 1643 aa22.14■■□□□ 1.13
SNCAIP-207ENST00000504884 MPHOSPH9Q99550 1183 aa22.13■■□□□ 1.13
SNCAIP-207ENST00000504884 ZNF777Q9ULD5 760 aaPredicted RBP22.13■■□□□ 1.13
SNCAIP-207ENST00000504884 ABCC10Q5T3U5 1492 aa22.12■■□□□ 1.13
SNCAIP-207ENST00000504884 NCOA1Q15788 1441 aa22.08■■□□□ 1.13
SNCAIP-207ENST00000504884 DENND4BO75064 1496 aaPredicted RBP22.08■■□□□ 1.12
SNCAIP-207ENST00000504884 CDC42BPAQ5VT25 1732 aa22.07■■□□□ 1.12
SNCAIP-207ENST00000504884 ADGRL2O95490 1459 aa22.06■■□□□ 1.12
SNCAIP-207ENST00000504884 ANKRD30AQ9BXX3 1397 aa22.04■■□□□ 1.12
SNCAIP-207ENST00000504884 ADGBQ8N7X0 1667 aa22.02■■□□□ 1.12
SNCAIP-207ENST00000504884 CLASP1Q7Z460 1538 aa22.02■■□□□ 1.12
SNCAIP-207ENST00000504884 CROCC2H7BZ55 1655 aa22.01■■□□□ 1.11
SNCAIP-207ENST00000504884 ERCC6L2Q5T890 1561 aa22■■□□□ 1.11
SNCAIP-207ENST00000504884 ABCC2Q92887 1545 aa22■■□□□ 1.11
SNCAIP-207ENST00000504884 TSPY4P0CV99 314 aa21.99■■□□□ 1.11
SNCAIP-207ENST00000504884 TSPY10P0CW01 314 aa21.99■■□□□ 1.11
SNCAIP-207ENST00000504884 SLC4A1APQ9BWU0 796 aaKnown RBP21.98■■□□□ 1.11
SNCAIP-207ENST00000504884 SHANK2Q9UPX8 1470 aa21.98■■□□□ 1.11
SNCAIP-207ENST00000504884 RSPH4AQ5TD94 716 aa21.98■■□□□ 1.11
SNCAIP-207ENST00000504884 ANKRD30BQ9BXX2 1392 aa21.97■■□□□ 1.11
SNCAIP-207ENST00000504884 SCAF1Q9H7N4 1312 aaKnown RBP21.94■■□□□ 1.1
SNCAIP-207ENST00000504884 C9orf84Q5VXU9 1444 aa21.94■■□□□ 1.1
SNCAIP-207ENST00000504884 KDM5BQ9UGL1 1544 aa21.94■■□□□ 1.1
SNCAIP-207ENST00000504884 FOXD1Q16676 465 aa21.94■■□□□ 1.1
SNCAIP-207ENST00000504884 ARHGEF5Q12774 1597 aa21.93■■□□□ 1.1
SNCAIP-207ENST00000504884 HNRNPMP52272 730 aaKnown RBP eCLIP21.93■■□□□ 1.1
SNCAIP-207ENST00000504884 YTHDC1Q96MU7 727 aaKnown RBP21.93■■□□□ 1.1
SNCAIP-207ENST00000504884 ANKRD50Q9ULJ7 1429 aa21.93■■□□□ 1.1
SNCAIP-207ENST00000504884 UHRF1BP1LA0JNW5 1464 aa21.92■■□□□ 1.1
SNCAIP-207ENST00000504884 MBD5Q9P267 1494 aa21.91■■□□□ 1.1
SNCAIP-207ENST00000504884 PREX2Q70Z35 1606 aa21.91■■□□□ 1.1
SNCAIP-207ENST00000504884 PZPP20742 1482 aa21.9■■□□□ 1.1
SNCAIP-207ENST00000504884 CDC42BPBQ9Y5S2 1711 aa21.9■■□□□ 1.1
SNCAIP-207ENST00000504884 RPRD2Q5VT52 1461 aaKnown RBP21.89■■□□□ 1.09
SNCAIP-207ENST00000504884 L3MBTL2Q969R5 705 aa21.88■■□□□ 1.09
SNCAIP-207ENST00000504884 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.88■■□□□ 1.09
SNCAIP-207ENST00000504884 DDX10Q13206 875 aaKnown RBP21.88■■□□□ 1.09
SNCAIP-207ENST00000504884 SAMD9LQ8IVG5 1584 aa21.87■■□□□ 1.09
SNCAIP-207ENST00000504884 CCDC141Q6ZP82 1450 aa21.86■■□□□ 1.09
SNCAIP-207ENST00000504884 HIRIP3Q9BW71 556 aaPredicted RBP21.86■■□□□ 1.09
SNCAIP-207ENST00000504884 KIAA1107Q9UPP5 1409 aa21.84■■□□□ 1.09
SNCAIP-207ENST00000504884 KCNH8Q96L42 1107 aa21.83■■□□□ 1.09
SNCAIP-207ENST00000504884 TTC37Q6PGP7 1564 aa21.83■■□□□ 1.09
SNCAIP-207ENST00000504884 ARHGAP5Q13017 1502 aa21.83■■□□□ 1.09
SNCAIP-207ENST00000504884 KIF15Q9NS87 1388 aa21.83■■□□□ 1.09
SNCAIP-207ENST00000504884 PLEKHH2Q8IVE3 1493 aa21.82■■□□□ 1.08
SNCAIP-207ENST00000504884 ZCCHC11Q5TAX3 1644 aaKnown RBP21.82■■□□□ 1.08
SNCAIP-207ENST00000504884 PKD2Q13563 968 aa21.81■■□□□ 1.08
SNCAIP-207ENST00000504884 NUP155O75694 1391 aa21.8■■□□□ 1.08
SNCAIP-207ENST00000504884 MYO5CQ9NQX4 1742 aa21.79■■□□□ 1.08
SNCAIP-207ENST00000504884 PLCH2O75038 1416 aa21.78■■□□□ 1.08
SNCAIP-207ENST00000504884 EIF4G2P78344 907 aaKnown RBP eCLIP21.77■■□□□ 1.08
SNCAIP-207ENST00000504884 TEX14Q8IWB6 1497 aa21.77■■□□□ 1.07
SNCAIP-207ENST00000504884 KDM5DQ9BY66 1539 aa21.76■■□□□ 1.07
SNCAIP-207ENST00000504884 EFCAB2Q5VUJ9 269 aa21.76■■□□□ 1.07
SNCAIP-207ENST00000504884 SYCP2Q9BX26 1530 aa21.76■■□□□ 1.07
SNCAIP-207ENST00000504884 MAST1Q9Y2H9 1570 aa21.75■■□□□ 1.07
SNCAIP-207ENST00000504884 HSPA5P11021 654 aaKnown RBP21.74■■□□□ 1.07
SNCAIP-207ENST00000504884 GTF3C3Q9Y5Q9 886 aa21.73■■□□□ 1.07
SNCAIP-207ENST00000504884 NBPF8Q3BBV2 869 aa21.71■■□□□ 1.07
SNCAIP-207ENST00000504884 OSCARQ8IYS5 282 aa21.69■■□□□ 1.06
SNCAIP-207ENST00000504884 ANP32CO43423 234 aa21.69■■□□□ 1.06
SNCAIP-207ENST00000504884 ARHGEF12Q9NZN5 1544 aa21.66■■□□□ 1.06
SNCAIP-207ENST00000504884 CCER2I3L3R5 266 aa21.65■■□□□ 1.06
SNCAIP-207ENST00000504884 PLXNC1O60486 1568 aa21.65■■□□□ 1.06
SNCAIP-207ENST00000504884 ARAP3Q8WWN8 1544 aa21.65■■□□□ 1.06
SNCAIP-207ENST00000504884 WDR7Q9Y4E6 1490 aa21.64■■□□□ 1.05
SNCAIP-207ENST00000504884 FAM135AQ9P2D6 1515 aa21.62■■□□□ 1.05
SNCAIP-207ENST00000504884 WASHC2AQ641Q2 1341 aa21.62■■□□□ 1.05
SNCAIP-207ENST00000504884 DUOX2Q9NRD8 1548 aa21.62■■□□□ 1.05
SNCAIP-207ENST00000504884 ABCC1P33527 1531 aa21.61■■□□□ 1.05
SNCAIP-207ENST00000504884 UNC13BO14795 1591 aa21.58■■□□□ 1.05
SNCAIP-207ENST00000504884 SPATA31E1Q6ZUB1 1445 aa21.58■■□□□ 1.05
SNCAIP-207ENST00000504884 ERBINQ96RT1 1412 aa21.57■■□□□ 1.04
SNCAIP-207ENST00000504884 TRAPPC8Q9Y2L5 1435 aa21.57■■□□□ 1.04
SNCAIP-207ENST00000504884 RTEL1-TNFRSF6BF6WH68 1400 aa21.56■■□□□ 1.04
SNCAIP-207ENST00000504884 UHRF1BP1Q6BDS2 1440 aa21.56■■□□□ 1.04
SNCAIP-207ENST00000504884 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.55■■□□□ 1.04
SNCAIP-207ENST00000504884 SPAG9O60271 1321 aaKnown RBP21.55■■□□□ 1.04
SNCAIP-207ENST00000504884 NPM1P06748 294 aaKnown RBP eCLIP21.54■■□□□ 1.04
SNCAIP-207ENST00000504884 ABCA9Q8IUA7 1624 aa21.53■■□□□ 1.04
SNCAIP-207ENST00000504884 CCDC7Q96M83 1385 aa21.53■■□□□ 1.04
SNCAIP-207ENST00000504884 ASXL2Q76L83 1435 aa21.53■■□□□ 1.04
SNCAIP-207ENST00000504884 C11orf95C9JLR9 678 aaPredicted RBP21.52■■□□□ 1.04
SNCAIP-207ENST00000504884 AFAP1Q8N556 730 aa21.52■■□□□ 1.03
SNCAIP-207ENST00000504884 IQGAP3Q86VI3 1631 aa21.51■■□□□ 1.03
SNCAIP-207ENST00000504884 ZNF326Q5BKZ1 582 aaKnown RBP21.51■■□□□ 1.03
SNCAIP-207ENST00000504884 FANCAO15360 1455 aa21.5■■□□□ 1.03
SNCAIP-207ENST00000504884 MAGI2Q86UL8 1455 aa21.5■■□□□ 1.03
SNCAIP-207ENST00000504884 CCDC144AA2RUR9 1427 aa21.5■■□□□ 1.03
SNCAIP-207ENST00000504884 DCAF11Q8TEB1 546 aa21.48■■□□□ 1.03
SNCAIP-207ENST00000504884 CNTLNQ9NXG0 1405 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms