RNA–Protein interactions for RNA: ENST00000504157.5

POLR2J3-209, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-209ENST00000504157 CCDC184Q52MB2 194 aa24.12■■□□□ 1.45
POLR2J3-209ENST00000504157 CCDC7Q96M83 1385 aa24.11■■□□□ 1.45
POLR2J3-209ENST00000504157 AKNAQ7Z591 1439 aa24.11■■□□□ 1.45
POLR2J3-209ENST00000504157 ABCA5Q8WWZ7 1642 aa24.1■■□□□ 1.45
POLR2J3-209ENST00000504157 GAPVD1Q14C86 1478 aa24.1■■□□□ 1.45
POLR2J3-209ENST00000504157 SMG6Q86US8 1419 aaKnown RBP24.1■■□□□ 1.45
POLR2J3-209ENST00000504157 MTUS2Q5JR59 1369 aa24.1■■□□□ 1.45
POLR2J3-209ENST00000504157 P3H3Q8IVL6 736 aa24.1■■□□□ 1.45
POLR2J3-209ENST00000504157 ATP1B4Q9UN42 357 aaPredicted RBP24.1■■□□□ 1.45
POLR2J3-209ENST00000504157 GCC2Q8IWJ2 1684 aa24.1■■□□□ 1.45
POLR2J3-209ENST00000504157 CTTNBP2Q8WZ74 1663 aa24.1■■□□□ 1.45
POLR2J3-209ENST00000504157 DENND4BO75064 1496 aaPredicted RBP24.09■■□□□ 1.45
POLR2J3-209ENST00000504157 RNF123Q5XPI4 1314 aa24.08■■□□□ 1.45
POLR2J3-209ENST00000504157 CUL7Q14999 1698 aa24.08■■□□□ 1.44
POLR2J3-209ENST00000504157 NEFMP07197 916 aa24.06■■□□□ 1.44
POLR2J3-209ENST00000504157 MRS2Q9HD23 443 aa24.06■■□□□ 1.44
POLR2J3-209ENST00000504157 EHBP1L1Q8N3D4 1523 aa24.05■■□□□ 1.44
POLR2J3-209ENST00000504157 SUPT6HQ7KZ85 1726 aaKnown RBP24.05■■□□□ 1.44
POLR2J3-209ENST00000504157 EIF4G3O43432 1585 aaKnown RBP24.05■■□□□ 1.44
POLR2J3-209ENST00000504157 ARHGEF11O15085 1522 aa24.05■■□□□ 1.44
POLR2J3-209ENST00000504157 POLR1AO95602 1720 aaPredicted RBP24.04■■□□□ 1.44
POLR2J3-209ENST00000504157 TCOF1Q13428 1488 aaKnown RBP24.03■■□□□ 1.44
POLR2J3-209ENST00000504157 FAM9BQ8IZU0 186 aa24.02■■□□□ 1.44
POLR2J3-209ENST00000504157 UGGT2Q9NYU1 1516 aa24.01■■□□□ 1.43
POLR2J3-209ENST00000504157 SAMD9Q5K651 1589 aa24.01■■□□□ 1.43
POLR2J3-209ENST00000504157 GRIN2BQ13224 1484 aa24■■□□□ 1.43
POLR2J3-209ENST00000504157 PPM1GO15355 546 aaPredicted RBP23.99■■□□□ 1.43
POLR2J3-209ENST00000504157 LRRIQ1Q96JM4 1722 aa23.98■■□□□ 1.43
POLR2J3-209ENST00000504157 SPATA31E1Q6ZUB1 1445 aa23.96■■□□□ 1.43
POLR2J3-209ENST00000504157 PBRM1Q86U86 1689 aa23.96■■□□□ 1.43
POLR2J3-209ENST00000504157 BRPF3Q9ULD4 1205 aa23.95■■□□□ 1.42
POLR2J3-209ENST00000504157 NUDCQ9Y266 331 aa23.94■■□□□ 1.42
POLR2J3-209ENST00000504157 EIF5BO60841 1220 aaKnown RBP23.94■■□□□ 1.42
POLR2J3-209ENST00000504157 LAS1LQ9Y4W2 734 aaKnown RBP23.93■■□□□ 1.42
POLR2J3-209ENST00000504157 L3MBTL2Q969R5 705 aa23.91■■□□□ 1.42
POLR2J3-209ENST00000504157 RPRD2Q5VT52 1461 aaKnown RBP23.89■■□□□ 1.42
POLR2J3-209ENST00000504157 KIF7Q2M1P5 1343 aa23.89■■□□□ 1.42
POLR2J3-209ENST00000504157 TEX14Q8IWB6 1497 aa23.89■■□□□ 1.41
POLR2J3-209ENST00000504157 GSE1Q14687 1217 aa23.88■■□□□ 1.41
POLR2J3-209ENST00000504157 RSPH6AQ9H0K4 717 aa23.88■■□□□ 1.41
POLR2J3-209ENST00000504157 MPHOSPH9Q99550 1183 aa23.86■■□□□ 1.41
POLR2J3-209ENST00000504157 KDM6BO15054 1643 aa23.86■■□□□ 1.41
POLR2J3-209ENST00000504157 MIA2Q96PC5 1412 aa23.86■■□□□ 1.41
POLR2J3-209ENST00000504157 PKNOX2Q96KN3 472 aa23.84■■□□□ 1.41
POLR2J3-209ENST00000504157 DHX29Q7Z478 1369 aaKnown RBP23.84■■□□□ 1.41
POLR2J3-209ENST00000504157 ANKRD30BQ9BXX2 1392 aa23.84■■□□□ 1.41
POLR2J3-209ENST00000504157 TCERG1O14776 1098 aaKnown RBP23.83■■□□□ 1.41
POLR2J3-209ENST00000504157 RRP7BPQ9NSQ0 103 aa23.82■■□□□ 1.4
POLR2J3-209ENST00000504157 FBLN2P98095 1184 aa23.82■■□□□ 1.4
POLR2J3-209ENST00000504157 NPM2Q86SE8 214 aaKnown RBP23.82■■□□□ 1.4
POLR2J3-209ENST00000504157 MAGI1Q96QZ7 1491 aaPredicted RBP23.81■■□□□ 1.4
POLR2J3-209ENST00000504157 ADAMTS12P58397 1594 aa23.81■■□□□ 1.4
POLR2J3-209ENST00000504157 MAGI3Q5TCQ9 1506 aa23.81■■□□□ 1.4
POLR2J3-209ENST00000504157 NBPF8Q3BBV2 869 aa23.79■■□□□ 1.4
POLR2J3-209ENST00000504157 PDE4AP27815 886 aa23.78■■□□□ 1.4
POLR2J3-209ENST00000504157 CHMP7Q8WUX9 453 aaPredicted RBP23.78■■□□□ 1.4
POLR2J3-209ENST00000504157 BACH2Q9BYV9 841 aa23.77■■□□□ 1.4
POLR2J3-209ENST00000504157 ARID4BQ4LE39 1312 aaPredicted RBP23.76■■□□□ 1.39
POLR2J3-209ENST00000504157 MS4A1P11836 297 aa23.76■■□□□ 1.39
POLR2J3-209ENST00000504157 ROCK1Q13464 1354 aa23.76■■□□□ 1.39
POLR2J3-209ENST00000504157 FAM43AQ8N2R8 423 aa23.75■■□□□ 1.39
POLR2J3-209ENST00000504157 SYNJ2O15056 1496 aa23.74■■□□□ 1.39
POLR2J3-209ENST00000504157 DDRGK1Q96HY6 314 aa23.71■■□□□ 1.39
POLR2J3-209ENST00000504157 CHIC2Q9UKJ5 165 aa23.71■■□□□ 1.39
POLR2J3-209ENST00000504157 FRAT1Q92837 279 aaPredicted RBP23.7■■□□□ 1.38
POLR2J3-209ENST00000504157 MBD5Q9P267 1494 aa23.7■■□□□ 1.38
POLR2J3-209ENST00000504157 NFKBIBQ15653 356 aa23.69■■□□□ 1.38
POLR2J3-209ENST00000504157 GRIN2AQ12879 1464 aa23.68■■□□□ 1.38
POLR2J3-209ENST00000504157 PNISRQ8TF01 805 aaKnown RBP23.67■■□□□ 1.38
POLR2J3-209ENST00000504157 LRPPRCP42704 1394 aaKnown RBP23.66■■□□□ 1.38
POLR2J3-209ENST00000504157 ROCK2O75116 1388 aaKnown RBP23.66■■□□□ 1.38
POLR2J3-209ENST00000504157 BCORL1Q5H9F3 1711 aa23.63■■□□□ 1.37
POLR2J3-209ENST00000504157 GLIPR1L2Q4G1C9 344 aa23.63■■□□□ 1.37
POLR2J3-209ENST00000504157 FOXD1Q16676 465 aa23.62■■□□□ 1.37
POLR2J3-209ENST00000504157 KTN1Q86UP2 1357 aaKnown RBP23.62■■□□□ 1.37
POLR2J3-209ENST00000504157 CHD1O14646 1710 aa23.62■■□□□ 1.37
POLR2J3-209ENST00000504157 DAPK1P53355 1430 aa23.61■■□□□ 1.37
POLR2J3-209ENST00000504157 EPRSP07814 1512 aaKnown RBP23.61■■□□□ 1.37
POLR2J3-209ENST00000504157 RRP1P56182 461 aaKnown RBP23.61■■□□□ 1.37
POLR2J3-209ENST00000504157 DNMT1P26358 1616 aaKnown RBP23.6■■□□□ 1.37
POLR2J3-209ENST00000504157 KIF14Q15058 1648 aa23.6■■□□□ 1.37
POLR2J3-209ENST00000504157 KDM5CP41229 1560 aa23.59■■□□□ 1.37
POLR2J3-209ENST00000504157 USP47Q96K76 1375 aa23.59■■□□□ 1.37
POLR2J3-209ENST00000504157 BRD4O60885 1362 aaPredicted RBP23.58■■□□□ 1.36
POLR2J3-209ENST00000504157 CEP170Q5SW79 1584 aa23.55■■□□□ 1.36
POLR2J3-209ENST00000504157 KIF15Q9NS87 1388 aa23.54■■□□□ 1.36
POLR2J3-209ENST00000504157 EXOC6Q8TAG9 804 aa23.54■■□□□ 1.36
POLR2J3-209ENST00000504157 TMC1Q8TDI8 760 aa23.54■■□□□ 1.36
POLR2J3-209ENST00000504157 ABCC5O15440 1437 aa23.54■■□□□ 1.36
POLR2J3-209ENST00000504157 PZPP20742 1482 aa23.53■■□□□ 1.36
POLR2J3-209ENST00000504157 NUP160Q12769 1436 aa23.52■■□□□ 1.36
POLR2J3-209ENST00000504157 SLC4A1APQ9BWU0 796 aaKnown RBP23.52■■□□□ 1.36
POLR2J3-209ENST00000504157 UHRF1BP1Q6BDS2 1440 aa23.51■■□□□ 1.35
POLR2J3-209ENST00000504157 PDE3BQ13370 1112 aa23.51■■□□□ 1.35
POLR2J3-209ENST00000504157 DCAF11Q8TEB1 546 aa23.51■■□□□ 1.35
POLR2J3-209ENST00000504157 RALGAPBQ86X10 1494 aa23.49■■□□□ 1.35
POLR2J3-209ENST00000504157 MYBBP1AQ9BQG0 1328 aaKnown RBP23.48■■□□□ 1.35
POLR2J3-209ENST00000504157 RCAN3Q9UKA8 241 aa23.48■■□□□ 1.35
POLR2J3-209ENST00000504157 RALBP1Q15311 655 aa23.48■■□□□ 1.35
POLR2J3-209ENST00000504157 KIAA0586Q9BVV6 1533 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms