RNA–Protein interactions for RNA: ENST00000499786.4

MED28-202, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 606 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-202ENST00000499786 CUL7Q14999 1698 aa11.02□□□□□ -0.64
MED28-202ENST00000499786 PRXQ9BXM0 1461 aa11.02□□□□□ -0.65
MED28-202ENST00000499786 RAPGEF2Q9Y4G8 1499 aa11.02□□□□□ -0.65
MED28-202ENST00000499786 PSEN1P49768 467 aa11.02□□□□□ -0.65
MED28-202ENST00000499786 RAD54L2Q9Y4B4 1467 aa11.01□□□□□ -0.65
MED28-202ENST00000499786 WDR62O43379 1518 aa11.01□□□□□ -0.65
MED28-202ENST00000499786 BBXQ8WY36 941 aaPredicted RBP11.01□□□□□ -0.65
MED28-202ENST00000499786 GABBR2O75899 941 aa11□□□□□ -0.65
MED28-202ENST00000499786 STK25O00506 426 aa10.99□□□□□ -0.65
MED28-202ENST00000499786 BCL11BQ9C0K0 894 aaPredicted RBP10.99□□□□□ -0.65
MED28-202ENST00000499786 ABCA5Q8WWZ7 1642 aa10.98□□□□□ -0.65
MED28-202ENST00000499786 THOC2Q8NI27 1593 aaKnown RBP10.97□□□□□ -0.65
MED28-202ENST00000499786 TARBP1Q13395 1621 aaKnown RBP10.96□□□□□ -0.65
MED28-202ENST00000499786 IFT140Q96RY7 1462 aa10.96□□□□□ -0.65
MED28-202ENST00000499786 CLIP1P30622 1438 aa10.96□□□□□ -0.65
MED28-202ENST00000499786 NKX1-1Q15270 411 aaPredicted RBP10.96□□□□□ -0.65
MED28-202ENST00000499786 GAPVD1Q14C86 1478 aa10.95□□□□□ -0.66
MED28-202ENST00000499786 CARMIL1Q5VZK9 1371 aa10.95□□□□□ -0.66
MED28-202ENST00000499786 TIE1P35590 1138 aa10.95□□□□□ -0.66
MED28-202ENST00000499786 SP7Q8TDD2 431 aaPredicted RBP10.95□□□□□ -0.66
MED28-202ENST00000499786 STK24Q9Y6E0 443 aa10.95□□□□□ -0.66
MED28-202ENST00000499786 PBRM1Q86U86 1689 aa10.95□□□□□ -0.66
MED28-202ENST00000499786 IGF1RP08069 1367 aa10.94□□□□□ -0.66
MED28-202ENST00000499786 BMP2KQ9NSY1 1161 aaPredicted RBP10.93□□□□□ -0.66
MED28-202ENST00000499786 TTLL13PA6NNM8 815 aa10.92□□□□□ -0.66
MED28-202ENST00000499786 TMEM106CQ9BVX2 250 aa10.92□□□□□ -0.66
MED28-202ENST00000499786 CTTNBP2Q8WZ74 1663 aa10.9□□□□□ -0.66
MED28-202ENST00000499786 TDRD9Q8NDG6 1382 aaKnown RBP10.9□□□□□ -0.67
MED28-202ENST00000499786 PLCB2Q00722 1185 aa10.88□□□□□ -0.67
MED28-202ENST00000499786 ASTLQ6HA08 431 aaPredicted RBP10.88□□□□□ -0.67
MED28-202ENST00000499786 GRIN2BQ13224 1484 aa10.87□□□□□ -0.67
MED28-202ENST00000499786 EIF4G3O43432 1585 aaKnown RBP10.87□□□□□ -0.67
MED28-202ENST00000499786 ADAMTS12P58397 1594 aa10.87□□□□□ -0.67
MED28-202ENST00000499786 VPS8Q8N3P4 1428 aa10.87□□□□□ -0.67
MED28-202ENST00000499786 ATMINO43313 823 aaPredicted RBP10.87□□□□□ -0.67
MED28-202ENST00000499786 CABP2Q9NPB3 220 aa10.86□□□□□ -0.67
MED28-202ENST00000499786 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.86□□□□□ -0.67
MED28-202ENST00000499786 GTPBP6O43824 516 aaPredicted RBP10.85□□□□□ -0.67
MED28-202ENST00000499786 RANGAP1P46060 587 aaPredicted RBP10.85□□□□□ -0.67
MED28-202ENST00000499786 EFCAB3Q8N7B9 438 aa10.85□□□□□ -0.67
MED28-202ENST00000499786 FHAD1B1AJZ9 1412 aa10.84□□□□□ -0.67
MED28-202ENST00000499786 ATN1P54259 1190 aaPredicted RBP10.84□□□□□ -0.67
MED28-202ENST00000499786 EFCAB5A4FU69 1503 aa10.84□□□□□ -0.67
MED28-202ENST00000499786 POTEIP0CG38 1075 aa10.83□□□□□ -0.68
MED28-202ENST00000499786 TRIM26Q12899 539 aaPredicted RBP10.83□□□□□ -0.68
MED28-202ENST00000499786 MFRPQ9BY79 579 aa10.83□□□□□ -0.68
MED28-202ENST00000499786 AQRO60306 1485 aaKnown RBP eCLIP10.82□□□□□ -0.68
MED28-202ENST00000499786 SOX12O15370 315 aa10.82□□□□□ -0.68
MED28-202ENST00000499786 ILDR1Q86SU0 546 aaPredicted RBP10.82□□□□□ -0.68
MED28-202ENST00000499786 SPRYD3Q8NCJ5 442 aa10.82□□□□□ -0.68
MED28-202ENST00000499786 ARAP1Q96P48 1450 aa10.81□□□□□ -0.68
MED28-202ENST00000499786 ZNF608Q9ULD9 1512 aaPredicted RBP10.81□□□□□ -0.68
MED28-202ENST00000499786 PAXIP1Q6ZW49 1069 aaPredicted RBP10.81□□□□□ -0.68
MED28-202ENST00000499786 TRIM35Q9UPQ4 493 aa10.81□□□□□ -0.68
MED28-202ENST00000499786 PELP1Q8IZL8 1130 aaKnown RBP10.8□□□□□ -0.68
MED28-202ENST00000499786 FBXO22Q8NEZ5 403 aa10.8□□□□□ -0.68
MED28-202ENST00000499786 PCGF6Q9BYE7 350 aa10.8□□□□□ -0.68
MED28-202ENST00000499786 SNAPC4Q5SXM2 1469 aa10.8□□□□□ -0.68
MED28-202ENST00000499786 MAGI1Q96QZ7 1491 aaPredicted RBP10.8□□□□□ -0.68
MED28-202ENST00000499786 ARHGAP35Q9NRY4 1499 aa10.79□□□□□ -0.68
MED28-202ENST00000499786 DCBLD2Q96PD2 775 aa10.77□□□□□ -0.69
MED28-202ENST00000499786 PHF8Q9UPP1 1060 aa10.77□□□□□ -0.69
MED28-202ENST00000499786 CFAP44Q96MT7 982 aa10.76□□□□□ -0.69
MED28-202ENST00000499786 IQGAP2Q13576 1575 aa10.76□□□□□ -0.69
MED28-202ENST00000499786 MS4A4AQ96JQ5 239 aa10.75□□□□□ -0.69
MED28-202ENST00000499786 NLRP6P59044 892 aa10.74□□□□□ -0.69
MED28-202ENST00000499786 MKRN3Q13064 507 aaKnown RBP10.74□□□□□ -0.69
MED28-202ENST00000499786 RYDENQ9NUL5 291 aaKnown RBP10.74□□□□□ -0.69
MED28-202ENST00000499786 SYNJ2O15056 1496 aa10.74□□□□□ -0.69
MED28-202ENST00000499786 GRIN2AQ12879 1464 aa10.74□□□□□ -0.69
MED28-202ENST00000499786 GOLGA2Q08379 1002 aa10.73□□□□□ -0.69
MED28-202ENST00000499786 IER5LQ5T953 404 aa10.73□□□□□ -0.69
MED28-202ENST00000499786 SAMD9Q5K651 1589 aa10.73□□□□□ -0.69
MED28-202ENST00000499786 IRX5P78411 483 aaPredicted RBP10.72□□□□□ -0.69
MED28-202ENST00000499786 FMN1Q68DA7 1419 aa10.71□□□□□ -0.69
MED28-202ENST00000499786 PCF11O94913 1555 aaKnown RBP10.7□□□□□ -0.7
MED28-202ENST00000499786 FYCO1Q9BQS8 1478 aa10.7□□□□□ -0.7
MED28-202ENST00000499786 FHOD3Q2V2M9 1422 aa10.7□□□□□ -0.7
MED28-202ENST00000499786 SLC24A1O60721 1099 aa10.7□□□□□ -0.7
MED28-202ENST00000499786 PPARGC1BQ86YN6 1023 aaKnown RBP10.7□□□□□ -0.7
MED28-202ENST00000499786 TTBK1Q5TCY1 1321 aaPredicted RBP10.69□□□□□ -0.7
MED28-202ENST00000499786 PPP1R37O75864 691 aa10.69□□□□□ -0.7
MED28-202ENST00000499786 PDCD7Q8N8D1 485 aaKnown RBP10.69□□□□□ -0.7
MED28-202ENST00000499786 CHMP7Q8WUX9 453 aaPredicted RBP10.69□□□□□ -0.7
MED28-202ENST00000499786 CFAP43Q8NDM7 1665 aa10.69□□□□□ -0.7
MED28-202ENST00000499786 KIAA0586Q9BVV6 1533 aa10.68□□□□□ -0.7
MED28-202ENST00000499786 POTEFA5A3E0 1075 aa10.68□□□□□ -0.7
MED28-202ENST00000499786 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.68□□□□□ -0.7
MED28-202ENST00000499786 SLC39A7Q92504 469 aa10.67□□□□□ -0.7
MED28-202ENST00000499786 TIAM1Q13009 1591 aa10.67□□□□□ -0.7
MED28-202ENST00000499786 MAP3K1Q13233 1512 aa10.67□□□□□ -0.7
MED28-202ENST00000499786 UGGT2Q9NYU1 1516 aa10.67□□□□□ -0.7
MED28-202ENST00000499786 C7P10643 843 aa10.66□□□□□ -0.7
MED28-202ENST00000499786 OCEL1Q9H607 264 aa10.66□□□□□ -0.7
MED28-202ENST00000499786 TSHZ2Q9NRE2 1034 aa10.66□□□□□ -0.7
MED28-202ENST00000499786 CASKIN1Q8WXD9 1431 aa10.66□□□□□ -0.7
MED28-202ENST00000499786 P3H3Q8IVL6 736 aa10.65□□□□□ -0.7
MED28-202ENST00000499786 COLQQ9Y215 455 aaPredicted RBP10.65□□□□□ -0.7
MED28-202ENST00000499786 CEP170Q5SW79 1584 aa10.65□□□□□ -0.71
MED28-202ENST00000499786 DPY19L2Q6NUT2 758 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms