RNA–Protein interactions for RNA: ENST00000498528.1

KDM3A-215, Transcript of lysine demethylase 3A, humanhuman

TSL 3

Gene KDM3A, Length 352 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-215ENST00000498528 PREX1Q8TCU6 1659 aa10.18□□□□□ -0.78
KDM3A-215ENST00000498528 ZMYM4Q5VZL5 1548 aa10.17□□□□□ -0.78
KDM3A-215ENST00000498528 CEBPAP49715 358 aaPredicted RBP10.17□□□□□ -0.78
KDM3A-215ENST00000498528 SOCS7O14512 581 aa10.16□□□□□ -0.78
KDM3A-215ENST00000498528 CSRNP3Q8WYN3 585 aa10.16□□□□□ -0.78
KDM3A-215ENST00000498528 SCAPERQ9BY12 1400 aa10.16□□□□□ -0.78
KDM3A-215ENST00000498528 SPATA31D1Q6ZQQ2 1576 aa10.14□□□□□ -0.79
KDM3A-215ENST00000498528 CDK13Q14004 1512 aaKnown RBP10.14□□□□□ -0.79
KDM3A-215ENST00000498528 MAGI2Q86UL8 1455 aa10.13□□□□□ -0.79
KDM3A-215ENST00000498528 EHMT2Q96KQ7 1210 aa10.13□□□□□ -0.79
KDM3A-215ENST00000498528 STRCQ7RTU9 1775 aa10.13□□□□□ -0.79
KDM3A-215ENST00000498528 DMRT2Q9Y5R5 561 aa10.12□□□□□ -0.79
KDM3A-215ENST00000498528 C9orf84Q5VXU9 1444 aa10.12□□□□□ -0.79
KDM3A-215ENST00000498528 UHRF1BP1Q6BDS2 1440 aa10.12□□□□□ -0.79
KDM3A-215ENST00000498528 MYO5CQ9NQX4 1742 aa10.12□□□□□ -0.79
KDM3A-215ENST00000498528 ARHGEF12Q9NZN5 1544 aa10.12□□□□□ -0.79
KDM3A-215ENST00000498528 ATP10AO60312 1499 aa10.11□□□□□ -0.79
KDM3A-215ENST00000498528 ESF1Q9H501 851 aaKnown RBP10.1□□□□□ -0.79
KDM3A-215ENST00000498528 PLCH2O75038 1416 aa10.09□□□□□ -0.79
KDM3A-215ENST00000498528 EFCAB2Q5VUJ9 269 aa10.09□□□□□ -0.79
KDM3A-215ENST00000498528 ARHGAP5Q13017 1502 aa10.07□□□□□ -0.8
KDM3A-215ENST00000498528 SETD1BQ9UPS6 1966 aaKnown RBP10.07□□□□□ -0.8
KDM3A-215ENST00000498528 C3P01024 1663 aa10.07□□□□□ -0.8
KDM3A-215ENST00000498528 AFAP1Q8N556 730 aa10.07□□□□□ -0.8
KDM3A-215ENST00000498528 KIF14Q15058 1648 aa10.07□□□□□ -0.8
KDM3A-215ENST00000498528 ZNF518AQ6AHZ1 1483 aa10.05□□□□□ -0.8
KDM3A-215ENST00000498528 CDK11AQ9UQ88 783 aaPredicted RBP10.04□□□□□ -0.8
KDM3A-215ENST00000498528 DIP2CQ9Y2E4 1556 aa10.04□□□□□ -0.8
KDM3A-215ENST00000498528 ABCA6Q8N139 1617 aa10.04□□□□□ -0.8
KDM3A-215ENST00000498528 PTPRTO14522 1441 aa10.03□□□□□ -0.8
KDM3A-215ENST00000498528 UBTFP17480 764 aaKnown RBP10.03□□□□□ -0.8
KDM3A-215ENST00000498528 EEA1Q15075 1411 aa10.02□□□□□ -0.81
KDM3A-215ENST00000498528 KDM5CP41229 1560 aa10.01□□□□□ -0.81
KDM3A-215ENST00000498528 CLIP1P30622 1438 aa10.01□□□□□ -0.81
KDM3A-215ENST00000498528 LTBP4Q8N2S1 1624 aa10.01□□□□□ -0.81
KDM3A-215ENST00000498528 UBAP1LF5GYI3 381 aa10.01□□□□□ -0.81
KDM3A-215ENST00000498528 FMN1Q68DA7 1419 aa10□□□□□ -0.81
KDM3A-215ENST00000498528 CDC42BPBQ9Y5S2 1711 aa10□□□□□ -0.81
KDM3A-215ENST00000498528 SCAF1Q9H7N4 1312 aaKnown RBP10□□□□□ -0.81
KDM3A-215ENST00000498528 CAMSAP1Q5T5Y3 1602 aa10□□□□□ -0.81
KDM3A-215ENST00000498528 TRAPPC8Q9Y2L5 1435 aa9.99□□□□□ -0.81
KDM3A-215ENST00000498528 SUPT6HQ7KZ85 1726 aaKnown RBP9.99□□□□□ -0.81
KDM3A-215ENST00000498528 NCKAP5LQ9HCH0 1330 aa9.99□□□□□ -0.81
KDM3A-215ENST00000498528 LRRIQ1Q96JM4 1722 aa9.99□□□□□ -0.81
KDM3A-215ENST00000498528 TROQ12816 1431 aaPredicted RBP9.99□□□□□ -0.81
KDM3A-215ENST00000498528 NCOA1Q15788 1441 aa9.99□□□□□ -0.81
KDM3A-215ENST00000498528 ITSN2Q9NZM3 1697 aa9.98□□□□□ -0.81
KDM3A-215ENST00000498528 ZNF335Q9H4Z2 1342 aaPredicted RBP9.98□□□□□ -0.81
KDM3A-215ENST00000498528 REREQ9P2R6 1566 aa9.97□□□□□ -0.81
KDM3A-215ENST00000498528 ZNF777Q9ULD5 760 aaPredicted RBP9.97□□□□□ -0.81
KDM3A-215ENST00000498528 IQSEC2Q5JU85 1478 aa9.97□□□□□ -0.81
KDM3A-215ENST00000498528 MLH3Q9UHC1 1453 aa9.97□□□□□ -0.81
KDM3A-215ENST00000498528 PREX2Q70Z35 1606 aa9.96□□□□□ -0.81
KDM3A-215ENST00000498528 CNTLNQ9NXG0 1405 aa9.96□□□□□ -0.82
KDM3A-215ENST00000498528 ARHGAP35Q9NRY4 1499 aa9.96□□□□□ -0.82
KDM3A-215ENST00000498528 ABCC1P33527 1531 aa9.96□□□□□ -0.82
KDM3A-215ENST00000498528 KIDINS220Q9ULH0 1771 aa9.96□□□□□ -0.82
KDM3A-215ENST00000498528 AGLP35573 1532 aa9.95□□□□□ -0.82
KDM3A-215ENST00000498528 CLTCQ00610 1675 aaKnown RBP9.95□□□□□ -0.82
KDM3A-215ENST00000498528 PIP4K2BP78356 416 aa9.94□□□□□ -0.82
KDM3A-215ENST00000498528 CDC42BPAQ5VT25 1732 aa9.93□□□□□ -0.82
KDM3A-215ENST00000498528 MROH2AA6NES4 1674 aa9.93□□□□□ -0.82
KDM3A-215ENST00000498528 MYO3AQ8NEV4 1616 aa9.93□□□□□ -0.82
KDM3A-215ENST00000498528 ZMYM3Q14202 1370 aa9.92□□□□□ -0.82
KDM3A-215ENST00000498528 SENP3Q9H4L4 574 aaPredicted RBP9.92□□□□□ -0.82
KDM3A-215ENST00000498528 NPATQ14207 1427 aa9.91□□□□□ -0.82
KDM3A-215ENST00000498528 SPAG9O60271 1321 aaKnown RBP9.91□□□□□ -0.82
KDM3A-215ENST00000498528 GGT6Q6P531 493 aa9.91□□□□□ -0.82
KDM3A-215ENST00000498528 SAMD9LQ8IVG5 1584 aa9.91□□□□□ -0.82
KDM3A-215ENST00000498528 CEP170BQ9Y4F5 1589 aaPredicted RBP9.9□□□□□ -0.82
KDM3A-215ENST00000498528 HSPA1LP34931 641 aa9.9□□□□□ -0.82
KDM3A-215ENST00000498528 HNRNPMP52272 730 aaKnown RBP eCLIP9.9□□□□□ -0.823e-8■■■■□ 20.7
KDM3A-215ENST00000498528 PPP6R1Q9UPN7 881 aa9.9□□□□□ -0.82
KDM3A-215ENST00000498528 SYCP2Q9BX26 1530 aa9.9□□□□□ -0.82
KDM3A-215ENST00000498528 ZNF142P52746 1687 aaPredicted RBP9.9□□□□□ -0.83
KDM3A-215ENST00000498528 PKD2Q13563 968 aa9.89□□□□□ -0.83
KDM3A-215ENST00000498528 PHF23Q9BUL5 403 aaPredicted RBP9.89□□□□□ -0.83
KDM3A-215ENST00000498528 CCDC18Q5T9S5 1454 aa9.89□□□□□ -0.83
KDM3A-215ENST00000498528 MED1Q15648 1581 aaPredicted RBP9.88□□□□□ -0.83
KDM3A-215ENST00000498528 ATP7AQ04656 1500 aa9.87□□□□□ -0.83
KDM3A-215ENST00000498528 A2MP01023 1474 aa9.86□□□□□ -0.83
KDM3A-215ENST00000498528 PLA2R1Q13018 1463 aa9.86□□□□□ -0.83
KDM3A-215ENST00000498528 TOM1O60784 492 aa9.86□□□□□ -0.83
KDM3A-215ENST00000498528 PTPRKQ15262 1439 aa9.86□□□□□ -0.83
KDM3A-215ENST00000498528 TCOF1Q13428 1488 aaKnown RBP9.85□□□□□ -0.83
KDM3A-215ENST00000498528 POLR1AO95602 1720 aaPredicted RBP9.85□□□□□ -0.83
KDM3A-215ENST00000498528 CASKIN1Q8WXD9 1431 aa9.85□□□□□ -0.83
KDM3A-215ENST00000498528 INO80Q9ULG1 1556 aaPredicted RBP9.84□□□□□ -0.83
KDM3A-215ENST00000498528 CFDP1Q9UEE9 299 aaPredicted RBP9.84□□□□□ -0.83
KDM3A-215ENST00000498528 GPATCH8Q9UKJ3 1502 aaKnown RBP9.83□□□□□ -0.84
KDM3A-215ENST00000498528 DNMT1P26358 1616 aaKnown RBP9.83□□□□□ -0.84
KDM3A-215ENST00000498528 PLXNC1O60486 1568 aa9.83□□□□□ -0.84
KDM3A-215ENST00000498528 ADGBQ8N7X0 1667 aa9.83□□□□□ -0.84
KDM3A-215ENST00000498528 CCNB3Q8WWL7 1395 aa9.82□□□□□ -0.84
KDM3A-215ENST00000498528 A2ML1A8K2U0 1454 aa9.82□□□□□ -0.84
KDM3A-215ENST00000498528 PLEKHH2Q8IVE3 1493 aa9.81□□□□□ -0.84
KDM3A-215ENST00000498528 FYCO1Q9BQS8 1478 aa9.81□□□□□ -0.84
KDM3A-215ENST00000498528 SHANK2Q9UPX8 1470 aa9.81□□□□□ -0.84
KDM3A-215ENST00000498528 CHIC1Q5VXU3 224 aa9.81□□□□□ -0.84
KDM3A-215ENST00000498528 FBXO31Q5XUX0 539 aaPredicted RBP9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms