RNA–Protein interactions for RNA: ENST00000498509.2

PHF7-209, Transcript of PHD finger protein 7, humanhuman

TSL 1 (best)

Gene PHF7, Length 1,727 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF7-209ENST00000498509 TOP2BQ02880 1626 aa12.15□□□□□ -0.46
PHF7-209ENST00000498509 LRRC9Q6ZRR7 1453 aa12.15□□□□□ -0.47
PHF7-209ENST00000498509 TPM2P07951 284 aa12.14□□□□□ -0.47
PHF7-209ENST00000498509 FAM9BQ8IZU0 186 aa12.14□□□□□ -0.47
PHF7-209ENST00000498509 NAP1L5Q96NT1 182 aaPredicted RBP12.14□□□□□ -0.47
PHF7-209ENST00000498509 CFAP43Q8NDM7 1665 aa12.14□□□□□ -0.47
PHF7-209ENST00000498509 ARHGAP35Q9NRY4 1499 aa12.13□□□□□ -0.47
PHF7-209ENST00000498509 RBM10P98175 930 aaKnown RBP12.13□□□□□ -0.47
PHF7-209ENST00000498509 CCDC184Q52MB2 194 aa12.13□□□□□ -0.47
PHF7-209ENST00000498509 BIVM-ERCC5R4GMW8 1640 aa12.13□□□□□ -0.47
PHF7-209ENST00000498509 CCDC7Q96M83 1385 aa12.12□□□□□ -0.47
PHF7-209ENST00000498509 EIF4G2P78344 907 aaKnown RBP eCLIP12.11□□□□□ -0.47
PHF7-209ENST00000498509 PRDM2Q13029 1718 aa12.11□□□□□ -0.47
PHF7-209ENST00000498509 DNAJC5BQ9UF47 199 aa12.11□□□□□ -0.47
PHF7-209ENST00000498509 LAMC3Q9Y6N6 1575 aa12.1□□□□□ -0.47
PHF7-209ENST00000498509 FANCD2Q9BXW9 1451 aa12.1□□□□□ -0.47
PHF7-209ENST00000498509 HSPA5P11021 654 aaKnown RBP12.1□□□□□ -0.47
PHF7-209ENST00000498509 RRP1P56182 461 aaKnown RBP12.1□□□□□ -0.47
PHF7-209ENST00000498509 FRAT2O75474 233 aaPredicted RBP12.08□□□□□ -0.48
PHF7-209ENST00000498509 PRDM4Q9UKN5 801 aa12.08□□□□□ -0.48
PHF7-209ENST00000498509 NESP48681 1621 aa12.07□□□□□ -0.48
PHF7-209ENST00000498509 MAP7D2Q96T17 732 aa12.07□□□□□ -0.48
PHF7-209ENST00000498509 PHLDB1Q86UU1 1377 aa12.07□□□□□ -0.48
PHF7-209ENST00000498509 HFM1A2PYH4 1435 aa12.07□□□□□ -0.48
PHF7-209ENST00000498509 CCDC18Q5T9S5 1454 aa12.07□□□□□ -0.48
PHF7-209ENST00000498509 CUX1P39880 1505 aa12.07□□□□□ -0.48
PHF7-209ENST00000498509 PDS5BQ9NTI5 1447 aa12.06□□□□□ -0.48
PHF7-209ENST00000498509 PDE4CQ08493 712 aa12.06□□□□□ -0.48
PHF7-209ENST00000498509 ISY1Q9ULR0 285 aaKnown RBP12.06□□□□□ -0.48
PHF7-209ENST00000498509 PDE3BQ13370 1112 aa12.05□□□□□ -0.48
PHF7-209ENST00000498509 TERF1P54274 439 aa12.04□□□□□ -0.48
PHF7-209ENST00000498509 PTPN23Q9H3S7 1636 aa12.04□□□□□ -0.48
PHF7-209ENST00000498509 FSD2A1L4K1 749 aa12.03□□□□□ -0.48
PHF7-209ENST00000498509 EXOC6Q8TAG9 804 aa12.03□□□□□ -0.48
PHF7-209ENST00000498509 FAM161AQ3B820 660 aa12.02□□□□□ -0.49
PHF7-209ENST00000498509 KTN1Q86UP2 1357 aaKnown RBP12.01□□□□□ -0.49
PHF7-209ENST00000498509 LRPPRCP42704 1394 aaKnown RBP12.01□□□□□ -0.49
PHF7-209ENST00000498509 ARID4BQ4LE39 1312 aaPredicted RBP12.01□□□□□ -0.49
PHF7-209ENST00000498509 HECW1Q76N89 1606 aa12□□□□□ -0.49
PHF7-209ENST00000498509 NCLP19338 710 aaKnown RBP12□□□□□ -0.49
PHF7-209ENST00000498509 INSRP06213 1382 aa12□□□□□ -0.49
PHF7-209ENST00000498509 GOLGA6L3A6NEY3 463 aa12□□□□□ -0.49
PHF7-209ENST00000498509 VIRMAQ69YN4 1812 aaKnown RBP11.99□□□□□ -0.49
PHF7-209ENST00000498509 SMAP1Q8IYB5 467 aaPredicted RBP11.99□□□□□ -0.49
PHF7-209ENST00000498509 RCAN3Q9UKA8 241 aa11.99□□□□□ -0.49
PHF7-209ENST00000498509 SPATA31E1Q6ZUB1 1445 aa11.98□□□□□ -0.49
PHF7-209ENST00000498509 ZMYM4Q5VZL5 1548 aa11.98□□□□□ -0.49
PHF7-209ENST00000498509 FAM50AQ14320 339 aaKnown RBP11.98□□□□□ -0.49
PHF7-209ENST00000498509 MTERF4Q7Z6M4 381 aaKnown RBP11.98□□□□□ -0.49
PHF7-209ENST00000498509 DHX29Q7Z478 1369 aaKnown RBP11.98□□□□□ -0.49
PHF7-209ENST00000498509 MYOM3Q5VTT5 1437 aa11.98□□□□□ -0.49
PHF7-209ENST00000498509 FMN1Q68DA7 1419 aa11.98□□□□□ -0.49
PHF7-209ENST00000498509 MIA2Q96PC5 1412 aa11.98□□□□□ -0.49
PHF7-209ENST00000498509 XRCC6P12956 609 aaKnown RBP eCLIP11.97□□□□□ -0.49
PHF7-209ENST00000498509 MRE11P49959 708 aa11.97□□□□□ -0.49
PHF7-209ENST00000498509 DNMBPQ6XZF7 1577 aa11.97□□□□□ -0.49
PHF7-209ENST00000498509 PNISRQ8TF01 805 aaKnown RBP11.97□□□□□ -0.49
PHF7-209ENST00000498509 POGKQ9P215 609 aa11.97□□□□□ -0.49
PHF7-209ENST00000498509 KIF27Q86VH2 1401 aa11.96□□□□□ -0.49
PHF7-209ENST00000498509 A0A0U1RQG5 324 aaPredicted RBP11.96□□□□□ -0.49
PHF7-209ENST00000498509 ESPNB1AK53 854 aa11.96□□□□□ -0.49
PHF7-209ENST00000498509 RANGAP1P46060 587 aaPredicted RBP11.96□□□□□ -0.49
PHF7-209ENST00000498509 BECN1Q14457 450 aa11.96□□□□□ -0.49
PHF7-209ENST00000498509 CENPQQ7L2Z9 268 aaPredicted RBP11.96□□□□□ -0.49
PHF7-209ENST00000498509 KDM2BQ8NHM5 1336 aa11.96□□□□□ -0.5
PHF7-209ENST00000498509 FGD5Q6ZNL6 1462 aa11.95□□□□□ -0.5
PHF7-209ENST00000498509 TOPBP1Q92547 1522 aa11.95□□□□□ -0.5
PHF7-209ENST00000498509 CCDC144AA2RUR9 1427 aa11.95□□□□□ -0.5
PHF7-209ENST00000498509 BRD4O60885 1362 aaPredicted RBP11.95□□□□□ -0.5
PHF7-209ENST00000498509 PDIA4P13667 645 aaKnown RBP11.94□□□□□ -0.5
PHF7-209ENST00000498509 C8orf34Q49A92 452 aa11.94□□□□□ -0.5
PHF7-209ENST00000498509 KIF7Q2M1P5 1343 aa11.94□□□□□ -0.5
PHF7-209ENST00000498509 AQRO60306 1485 aaKnown RBP eCLIP11.94□□□□□ -0.5
PHF7-209ENST00000498509 ROCK2O75116 1388 aaKnown RBP11.94□□□□□ -0.5
PHF7-209ENST00000498509 NAIPQ13075 1403 aa11.94□□□□□ -0.5
PHF7-209ENST00000498509 UTP14CQ5TAP6 766 aaKnown RBP11.94□□□□□ -0.5
PHF7-209ENST00000498509 FGD6Q6ZV73 1430 aa11.93□□□□□ -0.5
PHF7-209ENST00000498509 SLC4A3P48751 1232 aa11.93□□□□□ -0.5
PHF7-209ENST00000498509 GCC2Q8IWJ2 1684 aa11.92□□□□□ -0.5
PHF7-209ENST00000498509 FYCO1Q9BQS8 1478 aa11.92□□□□□ -0.5
PHF7-209ENST00000498509 URB2Q14146 1524 aaKnown RBP11.91□□□□□ -0.5
PHF7-209ENST00000498509 PLEKHH2Q8IVE3 1493 aa11.91□□□□□ -0.5
PHF7-209ENST00000498509 MYH16Q9H6N6 1097 aa11.9□□□□□ -0.5
PHF7-209ENST00000498509 POLA1P09884 1462 aaPredicted RBP11.89□□□□□ -0.51
PHF7-209ENST00000498509 PCF11O94913 1555 aaKnown RBP11.88□□□□□ -0.51
PHF7-209ENST00000498509 KIF21AQ7Z4S6 1674 aa11.88□□□□□ -0.51
PHF7-209ENST00000498509 RGS3P49796 1198 aa11.88□□□□□ -0.51
PHF7-209ENST00000498509 ANTXR1Q9H6X2 564 aa11.88□□□□□ -0.51
PHF7-209ENST00000498509 MRC2Q9UBG0 1479 aa11.88□□□□□ -0.51
PHF7-209ENST00000498509 SCAPERQ9BY12 1400 aa11.87□□□□□ -0.51
PHF7-209ENST00000498509 ZMYM3Q14202 1370 aa11.87□□□□□ -0.51
PHF7-209ENST00000498509 TAF7LQ5H9L4 462 aa11.87□□□□□ -0.51
PHF7-209ENST00000498509 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.87□□□□□ -0.51
PHF7-209ENST00000498509 OFD1O75665 1012 aa11.86□□□□□ -0.51
PHF7-209ENST00000498509 FOXD1Q16676 465 aa11.86□□□□□ -0.51
PHF7-209ENST00000498509 ZNF326Q5BKZ1 582 aaKnown RBP11.86□□□□□ -0.51
PHF7-209ENST00000498509 TMC1Q8TDI8 760 aa11.86□□□□□ -0.51
PHF7-209ENST00000498509 ABCA10Q8WWZ4 1543 aa11.86□□□□□ -0.51
PHF7-209ENST00000498509 ERCC6Q03468 1493 aa11.86□□□□□ -0.51
PHF7-209ENST00000498509 RAD54L2Q9Y4B4 1467 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms