RNA–Protein interactions for RNA: ENST00000497637.5

ACTN4-208, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-208ENST00000497637 RAPGEF6Q8TEU7 1601 aa31.2■■■□□ 2.58
ACTN4-208ENST00000497637 CFAP74Q9C0B2 1584 aa31.19■■■□□ 2.58
ACTN4-208ENST00000497637 CEP162Q5TB80 1403 aa31.19■■■□□ 2.58
ACTN4-208ENST00000497637 NUP153P49790 1475 aaKnown RBP31.14■■■□□ 2.57
ACTN4-208ENST00000497637 FER1L4A9Z1Z3 1794 aa31.12■■■□□ 2.57
ACTN4-208ENST00000497637 PREX1Q8TCU6 1659 aa31.11■■■□□ 2.57
ACTN4-208ENST00000497637 ARHGEF12Q9NZN5 1544 aa31.08■■■□□ 2.57
ACTN4-208ENST00000497637 SAMD9Q5K651 1589 aa31.08■■■□□ 2.57
ACTN4-208ENST00000497637 UHRF1BP1Q6BDS2 1440 aa31.07■■■□□ 2.56
ACTN4-208ENST00000497637 CEBPAP49715 358 aaPredicted RBP31.06■■■□□ 2.56
ACTN4-208ENST00000497637 SIGLEC1Q9BZZ2 1709 aa31.06■■■□□ 2.56
ACTN4-208ENST00000497637 ATP10AO60312 1499 aa31.06■■■□□ 2.56
ACTN4-208ENST00000497637 PTPRTO14522 1441 aa31.06■■■□□ 2.56
ACTN4-208ENST00000497637 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.03■■■□□ 2.56
ACTN4-208ENST00000497637 HECW1Q76N89 1606 aa31.03■■■□□ 2.56
ACTN4-208ENST00000497637 STRCQ7RTU9 1775 aa31.02■■■□□ 2.56
ACTN4-208ENST00000497637 C9orf84Q5VXU9 1444 aa31.02■■■□□ 2.56
ACTN4-208ENST00000497637 SCAPERQ9BY12 1400 aa31.02■■■□□ 2.56
ACTN4-208ENST00000497637 IQSEC2Q5JU85 1478 aa31■■■□□ 2.55
ACTN4-208ENST00000497637 SETD1BQ9UPS6 1966 aaKnown RBP30.99■■■□□ 2.55
ACTN4-208ENST00000497637 CLIP1P30622 1438 aa30.95■■■□□ 2.54
ACTN4-208ENST00000497637 PLCH2O75038 1416 aa30.94■■■□□ 2.54
ACTN4-208ENST00000497637 EFCAB2Q5VUJ9 269 aa30.9■■■□□ 2.54
ACTN4-208ENST00000497637 LTBP4Q8N2S1 1624 aa30.87■■■□□ 2.53
ACTN4-208ENST00000497637 ESF1Q9H501 851 aaKnown RBP30.83■■■□□ 2.53
ACTN4-208ENST00000497637 RANGAP1P46060 587 aaPredicted RBP30.81■■■□□ 2.52
ACTN4-208ENST00000497637 TRAPPC8Q9Y2L5 1435 aa30.8■■■□□ 2.52
ACTN4-208ENST00000497637 ZNF518AQ6AHZ1 1483 aa30.79■■■□□ 2.52
ACTN4-208ENST00000497637 NCOA1Q15788 1441 aa30.76■■■□□ 2.51
ACTN4-208ENST00000497637 TRIM26Q12899 539 aaPredicted RBP30.76■■■□□ 2.51
ACTN4-208ENST00000497637 MYT1LQ9UL68 1186 aa30.75■■■□□ 2.51
ACTN4-208ENST00000497637 UBAP1LF5GYI3 381 aa30.74■■■□□ 2.51
ACTN4-208ENST00000497637 AFAP1Q8N556 730 aa30.72■■■□□ 2.51
ACTN4-208ENST00000497637 CDK11AQ9UQ88 783 aaPredicted RBP30.7■■■□□ 2.51
ACTN4-208ENST00000497637 VPS8Q8N3P4 1428 aa30.7■■■□□ 2.5
ACTN4-208ENST00000497637 PCGF6Q9BYE7 350 aa30.69■■■□□ 2.5
ACTN4-208ENST00000497637 REREQ9P2R6 1566 aa30.68■■■□□ 2.5
ACTN4-208ENST00000497637 KDM5CP41229 1560 aa30.66■■■□□ 2.5
ACTN4-208ENST00000497637 CNTLNQ9NXG0 1405 aa30.66■■■□□ 2.5
ACTN4-208ENST00000497637 CDK13Q14004 1512 aaKnown RBP30.65■■■□□ 2.5
ACTN4-208ENST00000497637 C3P01024 1663 aa30.65■■■□□ 2.5
ACTN4-208ENST00000497637 AGLP35573 1532 aa30.63■■■□□ 2.49
ACTN4-208ENST00000497637 MLH3Q9UHC1 1453 aa30.61■■■□□ 2.49
ACTN4-208ENST00000497637 MYO5CQ9NQX4 1742 aa30.61■■■□□ 2.49
ACTN4-208ENST00000497637 ARHGAP35Q9NRY4 1499 aa30.6■■■□□ 2.49
ACTN4-208ENST00000497637 DIP2CQ9Y2E4 1556 aa30.6■■■□□ 2.49
ACTN4-208ENST00000497637 NPATQ14207 1427 aa30.59■■■□□ 2.49
ACTN4-208ENST00000497637 ZNF335Q9H4Z2 1342 aaPredicted RBP30.59■■■□□ 2.49
ACTN4-208ENST00000497637 PKD2Q13563 968 aa30.57■■■□□ 2.48
ACTN4-208ENST00000497637 ARHGAP5Q13017 1502 aa30.57■■■□□ 2.48
ACTN4-208ENST00000497637 CAMSAP1Q5T5Y3 1602 aa30.56■■■□□ 2.48
ACTN4-208ENST00000497637 ATP1B4Q9UN42 357 aaPredicted RBP30.54■■■□□ 2.48
ACTN4-208ENST00000497637 NCKAP5LQ9HCH0 1330 aa30.53■■■□□ 2.48
ACTN4-208ENST00000497637 PPARGC1BQ86YN6 1023 aaKnown RBP30.5■■■□□ 2.47
ACTN4-208ENST00000497637 TROQ12816 1431 aaPredicted RBP30.47■■■□□ 2.47
ACTN4-208ENST00000497637 FMN1Q68DA7 1419 aa30.47■■■□□ 2.47
ACTN4-208ENST00000497637 KIF14Q15058 1648 aa30.47■■■□□ 2.47
ACTN4-208ENST00000497637 ABCA6Q8N139 1617 aa30.47■■■□□ 2.47
ACTN4-208ENST00000497637 PLA2R1Q13018 1463 aa30.46■■■□□ 2.47
ACTN4-208ENST00000497637 ZMYM3Q14202 1370 aa30.46■■■□□ 2.47
ACTN4-208ENST00000497637 HSPA1LP34931 641 aa30.44■■■□□ 2.46
ACTN4-208ENST00000497637 TOM1O60784 492 aa30.42■■■□□ 2.46
ACTN4-208ENST00000497637 MED1Q15648 1581 aaPredicted RBP30.41■■■□□ 2.46
ACTN4-208ENST00000497637 APLP2Q06481 763 aa30.41■■■□□ 2.46
ACTN4-208ENST00000497637 SCAF1Q9H7N4 1312 aaKnown RBP30.41■■■□□ 2.46
ACTN4-208ENST00000497637 PPP6R1Q9UPN7 881 aa30.4■■■□□ 2.46
ACTN4-208ENST00000497637 TCOF1Q13428 1488 aaKnown RBP30.38■■■□□ 2.45
ACTN4-208ENST00000497637 MROH2AA6NES4 1674 aa30.37■■■□□ 2.45
ACTN4-208ENST00000497637 PHF23Q9BUL5 403 aaPredicted RBP30.37■■■□□ 2.45
ACTN4-208ENST00000497637 PIP4K2BP78356 416 aa30.36■■■□□ 2.45
ACTN4-208ENST00000497637 ABCC1P33527 1531 aa30.32■■■□□ 2.44
ACTN4-208ENST00000497637 KIDINS220Q9ULH0 1771 aa30.28■■■□□ 2.44
ACTN4-208ENST00000497637 ZNF142P52746 1687 aaPredicted RBP30.27■■■□□ 2.44
ACTN4-208ENST00000497637 CEP170BQ9Y4F5 1589 aaPredicted RBP30.26■■■□□ 2.43
ACTN4-208ENST00000497637 CDC42BPBQ9Y5S2 1711 aa30.26■■■□□ 2.43
ACTN4-208ENST00000497637 PTPRKQ15262 1439 aa30.25■■■□□ 2.43
ACTN4-208ENST00000497637 CPS1P31327 1500 aa30.25■■■□□ 2.43
ACTN4-208ENST00000497637 SPAG9O60271 1321 aaKnown RBP30.22■■■□□ 2.43
ACTN4-208ENST00000497637 MYO3AQ8NEV4 1616 aa30.22■■■□□ 2.43
ACTN4-208ENST00000497637 ITSN2Q9NZM3 1697 aa30.22■■■□□ 2.43
ACTN4-208ENST00000497637 PREX2Q70Z35 1606 aa30.22■■■□□ 2.43
ACTN4-208ENST00000497637 MAP3K1Q13233 1512 aa30.19■■■□□ 2.42
ACTN4-208ENST00000497637 SUPT6HQ7KZ85 1726 aaKnown RBP30.16■■■□□ 2.42
ACTN4-208ENST00000497637 SAMD9LQ8IVG5 1584 aa30.16■■■□□ 2.42
ACTN4-208ENST00000497637 SHANK2Q9UPX8 1470 aa30.16■■■□□ 2.42
ACTN4-208ENST00000497637 A2ML1A8K2U0 1454 aa30.15■■■□□ 2.42
ACTN4-208ENST00000497637 GGT6Q6P531 493 aa30.14■■■□□ 2.42
ACTN4-208ENST00000497637 CASKIN1Q8WXD9 1431 aa30.13■■■□□ 2.41
ACTN4-208ENST00000497637 CLTCQ00610 1675 aaKnown RBP30.12■■■□□ 2.41
ACTN4-208ENST00000497637 ZNF777Q9ULD5 760 aaPredicted RBP30.12■■■□□ 2.41
ACTN4-208ENST00000497637 KANK4Q5T7N3 995 aaPredicted RBP30.1■■■□□ 2.41
ACTN4-208ENST00000497637 A2MP01023 1474 aa30.09■■■□□ 2.41
ACTN4-208ENST00000497637 FYCO1Q9BQS8 1478 aa30.09■■■□□ 2.41
ACTN4-208ENST00000497637 CCDC18Q5T9S5 1454 aa30.06■■■□□ 2.4
ACTN4-208ENST00000497637 HNRNPMP52272 730 aaKnown RBP eCLIP30.06■■■□□ 2.4
ACTN4-208ENST00000497637 ANKLE2Q86XL3 938 aa30.06■■■□□ 2.4
ACTN4-208ENST00000497637 PLXNC1O60486 1568 aa30.06■■■□□ 2.4
ACTN4-208ENST00000497637 DNMT1P26358 1616 aaKnown RBP30.05■■■□□ 2.4
ACTN4-208ENST00000497637 KIAA1107Q9UPP5 1409 aa30.05■■■□□ 2.4
ACTN4-208ENST00000497637 TIAM1Q13009 1591 aa30.04■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms