RNA–Protein interactions for RNA: ENST00000497049.5

SIK3-213, Transcript of SIK family kinase 3, humanhuman

TSL 5

Gene SIK3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-213ENST00000497049 ATN1P54259 1190 aaPredicted RBP10.46□□□□□ -0.73
SIK3-213ENST00000497049 MKRN3Q13064 507 aaKnown RBP10.46□□□□□ -0.73
SIK3-213ENST00000497049 STK24Q9Y6E0 443 aa10.46□□□□□ -0.73
SIK3-213ENST00000497049 SYNJ1O43426 1573 aa10.46□□□□□ -0.74
SIK3-213ENST00000497049 POTEIP0CG38 1075 aa10.45□□□□□ -0.74
SIK3-213ENST00000497049 BIVM-ERCC5R4GMW8 1640 aa10.44□□□□□ -0.74
SIK3-213ENST00000497049 FGD5Q6ZNL6 1462 aa10.44□□□□□ -0.74
SIK3-213ENST00000497049 C7P10643 843 aa10.44□□□□□ -0.74
SIK3-213ENST00000497049 POLA1P09884 1462 aaPredicted RBP10.43□□□□□ -0.74
SIK3-213ENST00000497049 CABP2Q9NPB3 220 aa10.43□□□□□ -0.74
SIK3-213ENST00000497049 RYDENQ9NUL5 291 aaKnown RBP10.43□□□□□ -0.74
SIK3-213ENST00000497049 THOC2Q8NI27 1593 aaKnown RBP10.43□□□□□ -0.74
SIK3-213ENST00000497049 CUX2O14529 1486 aa10.42□□□□□ -0.74
SIK3-213ENST00000497049 SOX12O15370 315 aa10.41□□□□□ -0.74
SIK3-213ENST00000497049 IFT140Q96RY7 1462 aa10.41□□□□□ -0.74
SIK3-213ENST00000497049 RAD54L2Q9Y4B4 1467 aa10.41□□□□□ -0.74
SIK3-213ENST00000497049 ABCA10Q8WWZ4 1543 aa10.38□□□□□ -0.75
SIK3-213ENST00000497049 SEC24BO95487 1268 aa10.37□□□□□ -0.75
SIK3-213ENST00000497049 KIF27Q86VH2 1401 aa10.37□□□□□ -0.75
SIK3-213ENST00000497049 TDRD9Q8NDG6 1382 aaKnown RBP10.37□□□□□ -0.75
SIK3-213ENST00000497049 EEA1Q15075 1411 aa10.36□□□□□ -0.75
SIK3-213ENST00000497049 BBXQ8WY36 941 aaPredicted RBP10.36□□□□□ -0.75
SIK3-213ENST00000497049 METRNQ9UJH8 293 aa10.36□□□□□ -0.75
SIK3-213ENST00000497049 IGF1RP08069 1367 aa10.36□□□□□ -0.75
SIK3-213ENST00000497049 PLCG2P16885 1265 aa10.35□□□□□ -0.75
SIK3-213ENST00000497049 EFCAB3Q8N7B9 438 aa10.35□□□□□ -0.75
SIK3-213ENST00000497049 TARBP1Q13395 1621 aaKnown RBP10.34□□□□□ -0.75
SIK3-213ENST00000497049 NLRP6P59044 892 aa10.34□□□□□ -0.75
SIK3-213ENST00000497049 PELP1Q8IZL8 1130 aaKnown RBP10.34□□□□□ -0.75
SIK3-213ENST00000497049 OCEL1Q9H607 264 aa10.34□□□□□ -0.75
SIK3-213ENST00000497049 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.34□□□□□ -0.75
SIK3-213ENST00000497049 FAM9AQ8IZU1 332 aaPredicted RBP10.33□□□□□ -0.76
SIK3-213ENST00000497049 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.33□□□□□ -0.769e-7■■□□□ 12.6
SIK3-213ENST00000497049 AQRO60306 1485 aaKnown RBP eCLIP10.33□□□□□ -0.76
SIK3-213ENST00000497049 RUSC2Q8N2Y8 1516 aa10.33□□□□□ -0.76
SIK3-213ENST00000497049 IRX5P78411 483 aaPredicted RBP10.32□□□□□ -0.76
SIK3-213ENST00000497049 ILDR1Q86SU0 546 aaPredicted RBP10.32□□□□□ -0.76
SIK3-213ENST00000497049 GAPVD1Q14C86 1478 aa10.31□□□□□ -0.76
SIK3-213ENST00000497049 ZNF608Q9ULD9 1512 aaPredicted RBP10.31□□□□□ -0.76
SIK3-213ENST00000497049 WDR97A6NE52 1622 aa10.29□□□□□ -0.76
SIK3-213ENST00000497049 CARMIL1Q5VZK9 1371 aa10.28□□□□□ -0.76
SIK3-213ENST00000497049 GRIN2BQ13224 1484 aa10.28□□□□□ -0.76
SIK3-213ENST00000497049 L3MBTL3Q96JM7 780 aaPredicted RBP10.26□□□□□ -0.77
SIK3-213ENST00000497049 MFRPQ9BY79 579 aa10.26□□□□□ -0.77
SIK3-213ENST00000497049 ERICH3Q5RHP9 1530 aa10.26□□□□□ -0.77
SIK3-213ENST00000497049 G3V3G9 751 aa10.25□□□□□ -0.77
SIK3-213ENST00000497049 PHF8Q9UPP1 1060 aa10.25□□□□□ -0.77
SIK3-213ENST00000497049 PDCD7Q8N8D1 485 aaKnown RBP10.24□□□□□ -0.77
SIK3-213ENST00000497049 FBXO22Q8NEZ5 403 aa10.24□□□□□ -0.77
SIK3-213ENST00000497049 PRXQ9BXM0 1461 aa10.23□□□□□ -0.77
SIK3-213ENST00000497049 ABCA5Q8WWZ7 1642 aa10.23□□□□□ -0.77
SIK3-213ENST00000497049 LOC105371045A0A1W2PR82 267 aa10.23□□□□□ -0.77
SIK3-213ENST00000497049 CHMP7Q8WUX9 453 aaPredicted RBP10.23□□□□□ -0.77
SIK3-213ENST00000497049 FHAD1B1AJZ9 1412 aa10.23□□□□□ -0.77
SIK3-213ENST00000497049 NKX1-1Q15270 411 aaPredicted RBP10.22□□□□□ -0.77
SIK3-213ENST00000497049 MAMSTRQ6ZN01 415 aa10.22□□□□□ -0.77
SIK3-213ENST00000497049 COLQQ9Y215 455 aaPredicted RBP10.22□□□□□ -0.77
SIK3-213ENST00000497049 SPRYD3Q8NCJ5 442 aa10.21□□□□□ -0.77
SIK3-213ENST00000497049 MAGI1Q96QZ7 1491 aaPredicted RBP10.21□□□□□ -0.78
SIK3-213ENST00000497049 RAPGEF2Q9Y4G8 1499 aa10.2□□□□□ -0.78
SIK3-213ENST00000497049 EIF4G3O43432 1585 aaKnown RBP10.19□□□□□ -0.78
SIK3-213ENST00000497049 UBTFP17480 764 aaKnown RBP10.19□□□□□ -0.78
SIK3-213ENST00000497049 POTEFA5A3E0 1075 aa10.18□□□□□ -0.78
SIK3-213ENST00000497049 MS4A4AQ96JQ5 239 aa10.18□□□□□ -0.78
SIK3-213ENST00000497049 BOLA1Q9Y3E2 137 aa10.18□□□□□ -0.78
SIK3-213ENST00000497049 SNAPC4Q5SXM2 1469 aa10.17□□□□□ -0.78
SIK3-213ENST00000497049 GTPBP6O43824 516 aaPredicted RBP10.17□□□□□ -0.78
SIK3-213ENST00000497049 SYNJ2O15056 1496 aa10.17□□□□□ -0.78
SIK3-213ENST00000497049 SCUBE2Q9NQ36 999 aa10.16□□□□□ -0.78
SIK3-213ENST00000497049 CUL7Q14999 1698 aa10.15□□□□□ -0.79
SIK3-213ENST00000497049 TNIKQ9UKE5 1360 aa10.14□□□□□ -0.79
SIK3-213ENST00000497049 C3orf67Q6ZVT6 689 aa10.14□□□□□ -0.79
SIK3-213ENST00000497049 GOLGA3Q08378 1498 aa10.13□□□□□ -0.79
SIK3-213ENST00000497049 TMEM121BQ9BXQ6 578 aaPredicted RBP10.13□□□□□ -0.79
SIK3-213ENST00000497049 KIF21BO75037 1637 aa10.13□□□□□ -0.79
SIK3-213ENST00000497049 PBRM1Q86U86 1689 aa10.12□□□□□ -0.79
SIK3-213ENST00000497049 PAXIP1Q6ZW49 1069 aaPredicted RBP10.12□□□□□ -0.79
SIK3-213ENST00000497049 GRIN2AQ12879 1464 aa10.11□□□□□ -0.79
SIK3-213ENST00000497049 DPY19L2Q6NUT2 758 aa10.11□□□□□ -0.79
SIK3-213ENST00000497049 MICALL2Q8IY33 904 aa10.11□□□□□ -0.79
SIK3-213ENST00000497049 OTUD5Q96G74 571 aa10.11□□□□□ -0.79
SIK3-213ENST00000497049 JPH4Q96JJ6 628 aa10.11□□□□□ -0.79
SIK3-213ENST00000497049 ADAMTS12P58397 1594 aa10.1□□□□□ -0.79
SIK3-213ENST00000497049 CFAP44Q96MT7 982 aa10.1□□□□□ -0.79
SIK3-213ENST00000497049 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.1□□□□□ -0.79
SIK3-213ENST00000497049 NUP160Q12769 1436 aa10.09□□□□□ -0.79
SIK3-213ENST00000497049 PLCB2Q00722 1185 aa10.09□□□□□ -0.79
SIK3-213ENST00000497049 KIAA0586Q9BVV6 1533 aa10.08□□□□□ -0.8
SIK3-213ENST00000497049 POTEB2H3BUK9 544 aa10.08□□□□□ -0.8
SIK3-213ENST00000497049 PPP1R37O75864 691 aa10.05□□□□□ -0.8
SIK3-213ENST00000497049 POTEJP0CG39 1038 aa10.01□□□□□ -0.81
SIK3-213ENST00000497049 RANGAP1P46060 587 aaPredicted RBP10.01□□□□□ -0.81
SIK3-213ENST00000497049 CEP170Q5SW79 1584 aa10.01□□□□□ -0.81
SIK3-213ENST00000497049 TMC2Q8TDI7 906 aa10□□□□□ -0.81
SIK3-213ENST00000497049 CHD1O14646 1710 aa9.99□□□□□ -0.81
SIK3-213ENST00000497049 CLIP1P30622 1438 aa9.99□□□□□ -0.81
SIK3-213ENST00000497049 CEP162Q5TB80 1403 aa9.99□□□□□ -0.81
SIK3-213ENST00000497049 UGGT2Q9NYU1 1516 aa9.98□□□□□ -0.81
SIK3-213ENST00000497049 SLAIN1Q8ND83 568 aa9.98□□□□□ -0.81
SIK3-213ENST00000497049 CARMIL2Q6F5E8 1435 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms