RNA–Protein interactions for RNA: ENST00000497049.5

SIK3-213, Transcript of SIK family kinase 3, humanhuman

TSL 5

Gene SIK3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-213ENST00000497049 AEBP2Q6ZN18 517 aaPredicted RBP21.19■□□□□ 0.98
SIK3-213ENST00000497049 CHIC1Q5VXU3 224 aa20.81■□□□□ 0.92
SIK3-213ENST00000497049 SENP3Q9H4L4 574 aaPredicted RBP18.21■□□□□ 0.51
SIK3-213ENST00000497049 PHF23Q9BUL5 403 aaPredicted RBP18.17■□□□□ 0.5
SIK3-213ENST00000497049 PLPPR3Q6T4P5 718 aa16.96■□□□□ 0.31
SIK3-213ENST00000497049 FOXD1Q16676 465 aa16.75■□□□□ 0.27
SIK3-213ENST00000497049 ADRA2BP18089 450 aa16.02■□□□□ 0.16
SIK3-213ENST00000497049 PPP6R1Q9UPN7 881 aa16.01■□□□□ 0.15
SIK3-213ENST00000497049 PIAS4Q8N2W9 510 aaPredicted RBP15.86■□□□□ 0.13
SIK3-213ENST00000497049 MSH5O43196 834 aa15.64■□□□□ 0.09
SIK3-213ENST00000497049 POTEDQ86YR6 584 aa15.58■□□□□ 0.08
SIK3-213ENST00000497049 SCAF1Q9H7N4 1312 aaKnown RBP14.92□□□□□ -0.02
SIK3-213ENST00000497049 PPP4R3CPQ6ZMV5 832 aa14.85□□□□□ -0.03
SIK3-213ENST00000497049 NCBP3Q53F19 620 aaKnown RBP14.61□□□□□ -0.07
SIK3-213ENST00000497049 NISCHQ9Y2I1 1504 aa14.61□□□□□ -0.07
SIK3-213ENST00000497049 CNKSR2Q8WXI2 1034 aa14.52□□□□□ -0.09
SIK3-213ENST00000497049 MAPK8IP2Q13387 824 aaPredicted RBP14.5□□□□□ -0.09
SIK3-213ENST00000497049 DMRT2Q9Y5R5 561 aa14.49□□□□□ -0.09
SIK3-213ENST00000497049 KCNA4P22459 653 aa14.41□□□□□ -0.1
SIK3-213ENST00000497049 RNF216Q9NWF9 866 aaPredicted RBP14.26□□□□□ -0.13
SIK3-213ENST00000497049 NPM3O75607 178 aaKnown RBP14.23□□□□□ -0.13
SIK3-213ENST00000497049 HOXD11P31277 338 aaPredicted RBP14.17□□□□□ -0.14
SIK3-213ENST00000497049 DNAJC5BQ9UF47 199 aa13.99□□□□□ -0.17
SIK3-213ENST00000497049 DCAF8L1A6NGE4 600 aa13.8□□□□□ -0.2
SIK3-213ENST00000497049 SLC4A1APQ9BWU0 796 aaKnown RBP13.8□□□□□ -0.2
SIK3-213ENST00000497049 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.51□□□□□ -0.253e-8■■□□□ 12.5
SIK3-213ENST00000497049 SLC4A2P04920 1241 aa13.39□□□□□ -0.27
SIK3-213ENST00000497049 CACNB1Q02641 598 aaPredicted RBP13.39□□□□□ -0.27
SIK3-213ENST00000497049 FOXD4L1Q9NU39 408 aa13.39□□□□□ -0.27
SIK3-213ENST00000497049 RNF39Q9H2S5 420 aa13.31□□□□□ -0.28
SIK3-213ENST00000497049 EHMT2Q96KQ7 1210 aa13.28□□□□□ -0.28
SIK3-213ENST00000497049 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.27□□□□□ -0.29
SIK3-213ENST00000497049 HNRNPUL2Q1KMD3 747 aaKnown RBP13.27□□□□□ -0.29
SIK3-213ENST00000497049 MYCNP04198 464 aaPredicted RBP13.25□□□□□ -0.29
SIK3-213ENST00000497049 C1QBPQ07021 282 aaKnown RBP13.23□□□□□ -0.29
SIK3-213ENST00000497049 U3KPZ7 1027 aaPredicted RBP13.22□□□□□ -0.29
SIK3-213ENST00000497049 ZBTB22O15209 634 aa13.2□□□□□ -0.3
SIK3-213ENST00000497049 APLP2Q06481 763 aa13.18□□□□□ -0.3
SIK3-213ENST00000497049 SAMD1Q6SPF0 538 aaPredicted RBP13.16□□□□□ -0.3
SIK3-213ENST00000497049 CSRNP3Q8WYN3 585 aa13.15□□□□□ -0.3
SIK3-213ENST00000497049 ATXN8OSP0DMR3 200 aa13.01□□□□□ -0.33
SIK3-213ENST00000497049 ZNF219Q9P2Y4 722 aaPredicted RBP12.89□□□□□ -0.35
SIK3-213ENST00000497049 CAPN15O75808 1086 aa12.85□□□□□ -0.35
SIK3-213ENST00000497049 SPINK5Q9NQ38 1064 aaPredicted RBP12.8□□□□□ -0.36
SIK3-213ENST00000497049 CCDC180Q9P1Z9 1646 aa12.77□□□□□ -0.37
SIK3-213ENST00000497049 TRHP20396 242 aaPredicted RBP12.75□□□□□ -0.37
SIK3-213ENST00000497049 ATF5Q9Y2D1 282 aaPredicted RBP12.69□□□□□ -0.38
SIK3-213ENST00000497049 DSG3P32926 999 aa12.62□□□□□ -0.39
SIK3-213ENST00000497049 POLA2Q14181 598 aa12.55□□□□□ -0.4
SIK3-213ENST00000497049 ZBTB12Q9Y330 459 aaPredicted RBP12.54□□□□□ -0.4
SIK3-213ENST00000497049 ABCB7O75027 752 aa12.52□□□□□ -0.41
SIK3-213ENST00000497049 FBLN2P98095 1184 aa12.4□□□□□ -0.42
SIK3-213ENST00000497049 ABCC9O60706 1549 aa12.31□□□□□ -0.44
SIK3-213ENST00000497049 DCAF8L2P0C7V8 631 aa12.2□□□□□ -0.46
SIK3-213ENST00000497049 RBM42Q9BTD8 480 aaKnown RBP12.2□□□□□ -0.46
SIK3-213ENST00000497049 MKRN4PQ13434 485 aaPredicted RBP12.19□□□□□ -0.46
SIK3-213ENST00000497049 ZCCHC6Q5VYS8 1495 aaKnown RBP12.19□□□□□ -0.46
SIK3-213ENST00000497049 POTEHQ6S545 545 aa12.14□□□□□ -0.47
SIK3-213ENST00000497049 DCAF1Q9Y4B6 1507 aa12.12□□□□□ -0.47
SIK3-213ENST00000497049 SPDYE2BA6NHP3 402 aa12.11□□□□□ -0.47
SIK3-213ENST00000497049 SPDYE6P0CI01 402 aa12.11□□□□□ -0.47
SIK3-213ENST00000497049 SPDYE2Q495Y8 402 aa12.11□□□□□ -0.47
SIK3-213ENST00000497049 OSCARQ8IYS5 282 aa12.11□□□□□ -0.47
SIK3-213ENST00000497049 MYO15BQ96JP2 1530 aa12.09□□□□□ -0.47
SIK3-213ENST00000497049 NACADO15069 1562 aa12.03□□□□□ -0.48
SIK3-213ENST00000497049 SPDYE4A6NLX3 237 aa12□□□□□ -0.49
SIK3-213ENST00000497049 ZNF692Q9BU19 519 aaPredicted RBP11.99□□□□□ -0.49
SIK3-213ENST00000497049 AKT1S1Q96B36 256 aa11.97□□□□□ -0.49
SIK3-213ENST00000497049 SSUH2Q9Y2M2 353 aa11.95□□□□□ -0.5
SIK3-213ENST00000497049 RB1CC1Q8TDY2 1594 aa11.95□□□□□ -0.5
SIK3-213ENST00000497049 FKBP8Q14318 412 aa11.93□□□□□ -0.5
SIK3-213ENST00000497049 PABPN1Q86U42 306 aaKnown RBP eCLIP11.81□□□□□ -0.52
SIK3-213ENST00000497049 PROM2Q8N271 834 aa11.8□□□□□ -0.52
SIK3-213ENST00000497049 REM2Q8IYK8 340 aaPredicted RBP11.78□□□□□ -0.52
SIK3-213ENST00000497049 SPDYE1Q8NFV5 336 aaPredicted RBP11.77□□□□□ -0.53
SIK3-213ENST00000497049 STAG3Q9UJ98 1225 aa11.75□□□□□ -0.53
SIK3-213ENST00000497049 FBXO3Q9UK99 471 aa11.69□□□□□ -0.54
SIK3-213ENST00000497049 SHROOM4Q9ULL8 1493 aa11.68□□□□□ -0.54
SIK3-213ENST00000497049 SCRIBQ14160 1630 aa11.66□□□□□ -0.54
SIK3-213ENST00000497049 PITPNM1O00562 1244 aa11.62□□□□□ -0.55
SIK3-213ENST00000497049 CLEC11AQ9Y240 323 aa11.6□□□□□ -0.55
SIK3-213ENST00000497049 CHRDL2Q6WN34 429 aa11.58□□□□□ -0.56
SIK3-213ENST00000497049 BICRAQ9NZM4 1560 aa11.57□□□□□ -0.56
SIK3-213ENST00000497049 PRR29P0C7W0 189 aa11.56□□□□□ -0.56
SIK3-213ENST00000497049 UNC13AQ9UPW8 1703 aa11.56□□□□□ -0.56
SIK3-213ENST00000497049 PLEKHG5O94827 1062 aa11.5□□□□□ -0.57
SIK3-213ENST00000497049 FXR2P51116 673 aaKnown RBP eCLIP11.44□□□□□ -0.58
SIK3-213ENST00000497049 VASPP50552 380 aaPredicted RBP11.41□□□□□ -0.58
SIK3-213ENST00000497049 ZBTB47Q9UFB7 747 aaPredicted RBP11.41□□□□□ -0.58
SIK3-213ENST00000497049 PLCD3Q8N3E9 789 aa11.39□□□□□ -0.59
SIK3-213ENST00000497049 MIER1Q8N108 512 aa11.38□□□□□ -0.59
SIK3-213ENST00000497049 PIP4P2Q8N4L2 257 aa11.38□□□□□ -0.59
SIK3-213ENST00000497049 PRKAR2AP13861 404 aaKnown RBP11.35□□□□□ -0.59
SIK3-213ENST00000497049 CECR2Q9BXF3 1484 aa11.35□□□□□ -0.59
SIK3-213ENST00000497049 CREBZFQ9NS37 354 aa11.33□□□□□ -0.6
SIK3-213ENST00000497049 NPM1P06748 294 aaKnown RBP eCLIP11.28□□□□□ -0.6
SIK3-213ENST00000497049 BAZ1AQ9NRL2 1556 aaPredicted RBP11.28□□□□□ -0.6
SIK3-213ENST00000497049 RSF1Q96T23 1441 aaPredicted RBP11.26□□□□□ -0.61
SIK3-213ENST00000497049 SP7Q8TDD2 431 aaPredicted RBP11.26□□□□□ -0.61
SIK3-213ENST00000497049 FARP1Q9Y4F1 1045 aaPredicted RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms