RNA–Protein interactions for RNA: ENST00000496420.5

PEX1-210, Transcript of peroxisomal biogenesis factor 1, humanhuman

TSL 2

Gene PEX1, Length 5,333 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1-210ENST00000496420 ATAD2BQ9ULI0 1458 aa11.18□□□□□ -0.62
PEX1-210ENST00000496420 VGFO15240 615 aaPredicted RBP11.18□□□□□ -0.62
PEX1-210ENST00000496420 HNRNPMP52272 730 aaKnown RBP eCLIP11.18□□□□□ -0.62
PEX1-210ENST00000496420 PSME1Q06323 249 aa11.17□□□□□ -0.62
PEX1-210ENST00000496420 MYO15BQ96JP2 1530 aa11.17□□□□□ -0.62
PEX1-210ENST00000496420 TULP1O00294 542 aaPredicted RBP11.17□□□□□ -0.62
PEX1-210ENST00000496420 MORC1Q86VD1 984 aa11.17□□□□□ -0.62
PEX1-210ENST00000496420 PROSER2Q86WR7 435 aaPredicted RBP11.17□□□□□ -0.62
PEX1-210ENST00000496420 MRS2Q9HD23 443 aa11.17□□□□□ -0.62
PEX1-210ENST00000496420 PIP4K2BP78356 416 aa11.16□□□□□ -0.62
PEX1-210ENST00000496420 THEMISQ8N1K5 641 aaPredicted RBP11.16□□□□□ -0.62
PEX1-210ENST00000496420 HDAC5Q9UQL6 1122 aa11.16□□□□□ -0.62
PEX1-210ENST00000496420 CASC1Q6TDU7 716 aa11.15□□□□□ -0.63
PEX1-210ENST00000496420 EIF3AQ14152 1382 aaKnown RBP11.14□□□□□ -0.63
PEX1-210ENST00000496420 TAF7LQ5H9L4 462 aa11.14□□□□□ -0.63
PEX1-210ENST00000496420 CCDC18Q5T9S5 1454 aa11.14□□□□□ -0.63
PEX1-210ENST00000496420 CALD1Q05682 793 aaKnown RBP11.14□□□□□ -0.63
PEX1-210ENST00000496420 NUP155O75694 1391 aa11.14□□□□□ -0.63
PEX1-210ENST00000496420 NUTM2FA1L443 756 aa11.13□□□□□ -0.63
PEX1-210ENST00000496420 FTSJ3Q8IY81 847 aaKnown RBP11.13□□□□□ -0.63
PEX1-210ENST00000496420 MS4A1P11836 297 aa11.13□□□□□ -0.63
PEX1-210ENST00000496420 PKD2Q13563 968 aa11.13□□□□□ -0.63
PEX1-210ENST00000496420 NEUROD2Q15784 382 aa11.13□□□□□ -0.63
PEX1-210ENST00000496420 DDX10Q13206 875 aaKnown RBP11.12□□□□□ -0.63
PEX1-210ENST00000496420 HNRNPUQ00839 825 aaKnown RBP eCLIP11.11□□□□□ -0.63
PEX1-210ENST00000496420 TNIKQ9UKE5 1360 aa11.11□□□□□ -0.63
PEX1-210ENST00000496420 ANKLE2Q86XL3 938 aa11.11□□□□□ -0.63
PEX1-210ENST00000496420 ANP32BQ92688 251 aaKnown RBP11.11□□□□□ -0.63
PEX1-210ENST00000496420 SYTL4Q96C24 671 aaPredicted RBP11.11□□□□□ -0.63
PEX1-210ENST00000496420 FGD1P98174 961 aa11.1□□□□□ -0.63
PEX1-210ENST00000496420 FRAT2O75474 233 aaPredicted RBP11.1□□□□□ -0.63
PEX1-210ENST00000496420 NUTM2DQ5VT03 806 aaPredicted RBP11.1□□□□□ -0.63
PEX1-210ENST00000496420 CCDC88BA6NC98 1476 aa11.1□□□□□ -0.63
PEX1-210ENST00000496420 LTV1Q96GA3 475 aaPredicted RBP11.1□□□□□ -0.63
PEX1-210ENST00000496420 UACAQ9BZF9 1416 aa11.1□□□□□ -0.63
PEX1-210ENST00000496420 NUTM2BA6NNL0 878 aaPredicted RBP11.09□□□□□ -0.63
PEX1-210ENST00000496420 NUTM2EB1AL46 878 aaPredicted RBP11.09□□□□□ -0.63
PEX1-210ENST00000496420 C1orf141Q5JVX7 400 aa11.09□□□□□ -0.63
PEX1-210ENST00000496420 NUTM2AQ8IVF1 878 aaPredicted RBP11.09□□□□□ -0.63
PEX1-210ENST00000496420 CWC22Q9HCG8 908 aaKnown RBP11.09□□□□□ -0.63
PEX1-210ENST00000496420 PPP1R1BQ9UD71 204 aaPredicted RBP11.09□□□□□ -0.63
PEX1-210ENST00000496420 RAPGEF2Q9Y4G8 1499 aa11.08□□□□□ -0.64
PEX1-210ENST00000496420 GORABQ5T7V8 394 aa11.08□□□□□ -0.64
PEX1-210ENST00000496420 GAPVD1Q14C86 1478 aa11.07□□□□□ -0.64
PEX1-210ENST00000496420 ARHGAP35Q9NRY4 1499 aa11.07□□□□□ -0.64
PEX1-210ENST00000496420 MRC2Q9UBG0 1479 aa11.07□□□□□ -0.64
PEX1-210ENST00000496420 MROH2BQ7Z745 1585 aa11.07□□□□□ -0.64
PEX1-210ENST00000496420 ZRSR1Q15695 479 aaKnown RBP11.06□□□□□ -0.64
PEX1-210ENST00000496420 ANO8Q9HCE9 1232 aaPredicted RBP11.06□□□□□ -0.64
PEX1-210ENST00000496420 KCNJ4P48050 445 aa11.06□□□□□ -0.64
PEX1-210ENST00000496420 TXNDC2Q86VQ3 553 aa11.06□□□□□ -0.64
PEX1-210ENST00000496420 CLSTN1O94985 981 aa11.05□□□□□ -0.64
PEX1-210ENST00000496420 STK31Q9BXU1 1019 aa11.05□□□□□ -0.64
PEX1-210ENST00000496420 TTC5Q8N0Z6 440 aa11.05□□□□□ -0.64
PEX1-210ENST00000496420 KRI1Q8N9T8 703 aaKnown RBP11.04□□□□□ -0.64
PEX1-210ENST00000496420 GPRASP1Q5JY77 1395 aa11.04□□□□□ -0.64
PEX1-210ENST00000496420 CHMP3Q9Y3E7 222 aa11.03□□□□□ -0.64
PEX1-210ENST00000496420 CTDP1Q9Y5B0 961 aaPredicted RBP11.03□□□□□ -0.64
PEX1-210ENST00000496420 NCAPD3P42695 1498 aa11.03□□□□□ -0.64
PEX1-210ENST00000496420 TRIM34Q9BYJ4 488 aa11.02□□□□□ -0.64
PEX1-210ENST00000496420 IFT140Q96RY7 1462 aa11.02□□□□□ -0.64
PEX1-210ENST00000496420 ANP32AP39687 249 aaKnown RBP11.02□□□□□ -0.65
PEX1-210ENST00000496420 COG3Q96JB2 828 aa11.02□□□□□ -0.65
PEX1-210ENST00000496420 GRIN2BQ13224 1484 aa11.02□□□□□ -0.65
PEX1-210ENST00000496420 LMOD3Q0VAK6 560 aa11.02□□□□□ -0.65
PEX1-210ENST00000496420 RAPGEF4Q8WZA2 1011 aa11.02□□□□□ -0.65
PEX1-210ENST00000496420 TOM1O60784 492 aa11.01□□□□□ -0.65
PEX1-210ENST00000496420 NCLP19338 710 aaKnown RBP11.01□□□□□ -0.65
PEX1-210ENST00000496420 PDE3BQ13370 1112 aa11.01□□□□□ -0.65
PEX1-210ENST00000496420 NOL10Q9BSC4 688 aaKnown RBP11.01□□□□□ -0.65
PEX1-210ENST00000496420 CC2D1BQ5T0F9 858 aaKnown RBP11□□□□□ -0.65
PEX1-210ENST00000496420 ZBTB4Q9P1Z0 1013 aaPredicted RBP11□□□□□ -0.65
PEX1-210ENST00000496420 TEFQ10587 303 aa11□□□□□ -0.65
PEX1-210ENST00000496420 PRG4Q92954 1404 aaPredicted RBP10.99□□□□□ -0.65
PEX1-210ENST00000496420 TOP2AP11388 1531 aaKnown RBP10.99□□□□□ -0.65
PEX1-210ENST00000496420 NAP1L2Q9ULW6 460 aaPredicted RBP10.99□□□□□ -0.65
PEX1-210ENST00000496420 AQRO60306 1485 aaKnown RBP eCLIP10.99□□□□□ -0.65
PEX1-210ENST00000496420 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.98□□□□□ -0.65
PEX1-210ENST00000496420 TRAK1Q9UPV9 953 aa10.98□□□□□ -0.65
PEX1-210ENST00000496420 U2AF1L5P0DN76 240 aaPredicted RBP10.98□□□□□ -0.65
PEX1-210ENST00000496420 U2AF1Q01081 240 aaKnown RBP eCLIP10.98□□□□□ -0.65
PEX1-210ENST00000496420 EVC2Q86UK5 1308 aa10.97□□□□□ -0.65
PEX1-210ENST00000496420 DDRGK1Q96HY6 314 aa10.97□□□□□ -0.65
PEX1-210ENST00000496420 NLRP2Q9NX02 1062 aa10.97□□□□□ -0.65
PEX1-210ENST00000496420 DNAJC5BQ9UF47 199 aa10.97□□□□□ -0.65
PEX1-210ENST00000496420 UBAP1LF5GYI3 381 aa10.97□□□□□ -0.65
PEX1-210ENST00000496420 ESCO1Q5FWF5 840 aa10.96□□□□□ -0.65
PEX1-210ENST00000496420 ROCK2O75116 1388 aaKnown RBP10.96□□□□□ -0.65
PEX1-210ENST00000496420 RBM33Q96EV2 1170 aaKnown RBP10.96□□□□□ -0.66
PEX1-210ENST00000496420 CCDC136Q96JN2 1154 aa10.96□□□□□ -0.66
PEX1-210ENST00000496420 HSP90B1P14625 803 aaKnown RBP10.96□□□□□ -0.66
PEX1-210ENST00000496420 IPO8O15397 1037 aaKnown RBP10.95□□□□□ -0.66
PEX1-210ENST00000496420 AMOTL1Q8IY63 956 aa10.95□□□□□ -0.66
PEX1-210ENST00000496420 WDHD1O75717 1129 aaPredicted RBP10.95□□□□□ -0.66
PEX1-210ENST00000496420 NCBP3Q53F19 620 aaKnown RBP10.95□□□□□ -0.66
PEX1-210ENST00000496420 TAOK2Q9UL54 1235 aa10.95□□□□□ -0.66
PEX1-210ENST00000496420 FHOD3Q2V2M9 1422 aa10.94□□□□□ -0.66
PEX1-210ENST00000496420 STRN4Q9NRL3 753 aa10.93□□□□□ -0.66
PEX1-210ENST00000496420 USP35Q9P2H5 1018 aa10.93□□□□□ -0.66
PEX1-210ENST00000496420 SYNJ2O15056 1496 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms