RNA–Protein interactions for RNA: ENST00000495952.5

SURF1-204, Transcript of SURF1, cytochrome c oxidase assembly factor, humanhuman

TSL 2

Gene SURF1, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF1-204ENST00000495952 ABCC5O15440 1437 aa13.82□□□□□ -0.2
SURF1-204ENST00000495952 SHANK2Q9UPX8 1470 aa13.82□□□□□ -0.2
SURF1-204ENST00000495952 CDC42BPAQ5VT25 1732 aa13.82□□□□□ -0.2
SURF1-204ENST00000495952 NCOA1Q15788 1441 aa13.81□□□□□ -0.2
SURF1-204ENST00000495952 SYNJ2O15056 1496 aa13.81□□□□□ -0.2
SURF1-204ENST00000495952 CAMSAP2Q08AD1 1489 aa13.81□□□□□ -0.2
SURF1-204ENST00000495952 ZNF608Q9ULD9 1512 aaPredicted RBP13.81□□□□□ -0.2
SURF1-204ENST00000495952 KDM5DQ9BY66 1539 aa13.8□□□□□ -0.2
SURF1-204ENST00000495952 MBD5Q9P267 1494 aa13.8□□□□□ -0.2
SURF1-204ENST00000495952 ANKRD30BQ9BXX2 1392 aa13.79□□□□□ -0.2
SURF1-204ENST00000495952 NEFLP07196 543 aa13.78□□□□□ -0.2
SURF1-204ENST00000495952 KCNH8Q96L42 1107 aa13.78□□□□□ -0.2
SURF1-204ENST00000495952 CDK11AQ9UQ88 783 aaPredicted RBP13.78□□□□□ -0.2
SURF1-204ENST00000495952 ABCA8O94911 1581 aa13.78□□□□□ -0.2
SURF1-204ENST00000495952 NUP160Q12769 1436 aa13.77□□□□□ -0.21
SURF1-204ENST00000495952 ARHGEF5Q12774 1597 aa13.76□□□□□ -0.21
SURF1-204ENST00000495952 PZPP20742 1482 aa13.76□□□□□ -0.21
SURF1-204ENST00000495952 ARHGEF12Q9NZN5 1544 aa13.75□□□□□ -0.21
SURF1-204ENST00000495952 EIF4G2P78344 907 aaKnown RBP eCLIP13.75□□□□□ -0.21
SURF1-204ENST00000495952 MPHOSPH9Q99550 1183 aa13.75□□□□□ -0.21
SURF1-204ENST00000495952 TSHZ2Q9NRE2 1034 aa13.75□□□□□ -0.21
SURF1-204ENST00000495952 CARMIL2Q6F5E8 1435 aa13.74□□□□□ -0.21
SURF1-204ENST00000495952 RRP7BPQ9NSQ0 103 aa13.74□□□□□ -0.21
SURF1-204ENST00000495952 GPATCH8Q9UKJ3 1502 aaKnown RBP13.74□□□□□ -0.21
SURF1-204ENST00000495952 SPATA31E1Q6ZUB1 1445 aa13.73□□□□□ -0.21
SURF1-204ENST00000495952 KDM5CP41229 1560 aa13.73□□□□□ -0.21
SURF1-204ENST00000495952 CCDC7Q96M83 1385 aa13.72□□□□□ -0.21
SURF1-204ENST00000495952 HSPA5P11021 654 aaKnown RBP13.72□□□□□ -0.21
SURF1-204ENST00000495952 ERICH6BQ5W0A0 696 aa13.72□□□□□ -0.21
SURF1-204ENST00000495952 WASHC2AQ641Q2 1341 aa13.71□□□□□ -0.21
SURF1-204ENST00000495952 KIAA1107Q9UPP5 1409 aa13.71□□□□□ -0.22
SURF1-204ENST00000495952 PREX2Q70Z35 1606 aa13.71□□□□□ -0.22
SURF1-204ENST00000495952 ABCC10Q5T3U5 1492 aa13.7□□□□□ -0.22
SURF1-204ENST00000495952 TRIM52Q96A61 297 aa13.7□□□□□ -0.22
SURF1-204ENST00000495952 FKBP8Q14318 412 aa13.69□□□□□ -0.22
SURF1-204ENST00000495952 E9PCH4 1651 aa13.69□□□□□ -0.22
SURF1-204ENST00000495952 MAST1Q9Y2H9 1570 aa13.68□□□□□ -0.22
SURF1-204ENST00000495952 UHRF1BP1Q6BDS2 1440 aa13.68□□□□□ -0.22
SURF1-204ENST00000495952 RALGAPBQ86X10 1494 aa13.67□□□□□ -0.22
SURF1-204ENST00000495952 CHIC2Q9UKJ5 165 aa13.67□□□□□ -0.22
SURF1-204ENST00000495952 LAMC1P11047 1609 aa13.67□□□□□ -0.22
SURF1-204ENST00000495952 ANKRD30AQ9BXX3 1397 aa13.67□□□□□ -0.22
SURF1-204ENST00000495952 ARID4BQ4LE39 1312 aaPredicted RBP13.66□□□□□ -0.22
SURF1-204ENST00000495952 L3MBTL2Q969R5 705 aa13.66□□□□□ -0.22
SURF1-204ENST00000495952 HIRIP3Q9BW71 556 aaPredicted RBP13.66□□□□□ -0.22
SURF1-204ENST00000495952 DNAJC5BQ9UF47 199 aa13.66□□□□□ -0.22
SURF1-204ENST00000495952 BCORL1Q5H9F3 1711 aa13.66□□□□□ -0.22
SURF1-204ENST00000495952 PLB1Q6P1J6 1458 aa13.66□□□□□ -0.22
SURF1-204ENST00000495952 PRG4Q92954 1404 aaPredicted RBP13.65□□□□□ -0.22
SURF1-204ENST00000495952 PTPRGP23470 1445 aa13.64□□□□□ -0.23
SURF1-204ENST00000495952 UNC13BO14795 1591 aa13.64□□□□□ -0.23
SURF1-204ENST00000495952 ERCC6Q03468 1493 aa13.64□□□□□ -0.23
SURF1-204ENST00000495952 CDC42BPBQ9Y5S2 1711 aa13.64□□□□□ -0.23
SURF1-204ENST00000495952 PLXNC1O60486 1568 aa13.62□□□□□ -0.23
SURF1-204ENST00000495952 ROCK2O75116 1388 aaKnown RBP13.62□□□□□ -0.23
SURF1-204ENST00000495952 SHROOM2Q13796 1616 aa13.62□□□□□ -0.23
SURF1-204ENST00000495952 C9orf84Q5VXU9 1444 aa13.61□□□□□ -0.23
SURF1-204ENST00000495952 ANKRD50Q9ULJ7 1429 aa13.61□□□□□ -0.23
SURF1-204ENST00000495952 SLC4A1APQ9BWU0 796 aaKnown RBP13.6□□□□□ -0.23
SURF1-204ENST00000495952 ZBED9Q6R2W3 1325 aa13.6□□□□□ -0.23
SURF1-204ENST00000495952 MYO5CQ9NQX4 1742 aa13.59□□□□□ -0.23
SURF1-204ENST00000495952 SAMD9LQ8IVG5 1584 aa13.59□□□□□ -0.23
SURF1-204ENST00000495952 HNRNPUQ00839 825 aaKnown RBP eCLIP13.59□□□□□ -0.23
SURF1-204ENST00000495952 PRKRIP1Q9H875 184 aaPredicted RBP13.59□□□□□ -0.23
SURF1-204ENST00000495952 CFDP1Q9UEE9 299 aaPredicted RBP13.59□□□□□ -0.23
SURF1-204ENST00000495952 TRPM1Q7Z4N2 1603 aa13.59□□□□□ -0.23
SURF1-204ENST00000495952 ATP10BO94823 1461 aa13.58□□□□□ -0.24
SURF1-204ENST00000495952 KIF7Q2M1P5 1343 aa13.58□□□□□ -0.24
SURF1-204ENST00000495952 IQGAP3Q86VI3 1631 aa13.57□□□□□ -0.24
SURF1-204ENST00000495952 EIF2AK4Q9P2K8 1649 aaKnown RBP13.57□□□□□ -0.24
SURF1-204ENST00000495952 CCDC141Q6ZP82 1450 aa13.57□□□□□ -0.24
SURF1-204ENST00000495952 NBPF8Q3BBV2 869 aa13.57□□□□□ -0.24
SURF1-204ENST00000495952 KTN1Q86UP2 1357 aaKnown RBP13.57□□□□□ -0.24
SURF1-204ENST00000495952 CHD1O14646 1710 aa13.56□□□□□ -0.24
SURF1-204ENST00000495952 ZNF644Q9H582 1327 aaPredicted RBP13.56□□□□□ -0.24
SURF1-204ENST00000495952 DHX29Q7Z478 1369 aaKnown RBP13.55□□□□□ -0.24
SURF1-204ENST00000495952 USP47Q96K76 1375 aa13.55□□□□□ -0.24
SURF1-204ENST00000495952 CHMP7Q8WUX9 453 aaPredicted RBP13.54□□□□□ -0.24
SURF1-204ENST00000495952 ANP32EQ9BTT0 268 aa13.54□□□□□ -0.24
SURF1-204ENST00000495952 BCANQ96GW7 911 aa13.53□□□□□ -0.24
SURF1-204ENST00000495952 PLEKHH2Q8IVE3 1493 aa13.53□□□□□ -0.24
SURF1-204ENST00000495952 FAM135AQ9P2D6 1515 aa13.53□□□□□ -0.24
SURF1-204ENST00000495952 SMG6Q86US8 1419 aaKnown RBP13.52□□□□□ -0.25
SURF1-204ENST00000495952 RNF17Q9BXT8 1623 aaKnown RBP13.52□□□□□ -0.25
SURF1-204ENST00000495952 ZMYM4Q5VZL5 1548 aa13.51□□□□□ -0.25
SURF1-204ENST00000495952 MAGI2Q86UL8 1455 aa13.51□□□□□ -0.25
SURF1-204ENST00000495952 JPH4Q96JJ6 628 aa13.51□□□□□ -0.25
SURF1-204ENST00000495952 C11orf95C9JLR9 678 aaPredicted RBP13.5□□□□□ -0.25
SURF1-204ENST00000495952 FOXD1Q16676 465 aa13.5□□□□□ -0.25
SURF1-204ENST00000495952 RSPH4AQ5TD94 716 aa13.5□□□□□ -0.25
SURF1-204ENST00000495952 PLEKHD1A6NEE1 506 aa13.49□□□□□ -0.25
SURF1-204ENST00000495952 MRS2Q9HD23 443 aa13.49□□□□□ -0.25
SURF1-204ENST00000495952 PPP4R2Q9NY27 417 aa13.49□□□□□ -0.25
SURF1-204ENST00000495952 KIF15Q9NS87 1388 aa13.48□□□□□ -0.25
SURF1-204ENST00000495952 FANCIQ9NVI1 1328 aa13.48□□□□□ -0.25
SURF1-204ENST00000495952 TTC37Q6PGP7 1564 aa13.48□□□□□ -0.25
SURF1-204ENST00000495952 PRDM15P57071 1507 aaPredicted RBP13.48□□□□□ -0.25
SURF1-204ENST00000495952 ARID3CA6NKF2 412 aa13.47□□□□□ -0.25
SURF1-204ENST00000495952 RBM19Q9Y4C8 960 aaKnown RBP13.47□□□□□ -0.25
SURF1-204ENST00000495952 ABCC2Q92887 1545 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 140.6 ms