RNA–Protein interactions for RNA: ENST00000494654.1

MDC1-208, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-208ENST00000494654 KIF21BO75037 1637 aa3.99□□□□□ -1.77
MDC1-208ENST00000494654 PHF8Q9UPP1 1060 aa3.99□□□□□ -1.77
MDC1-208ENST00000494654 ERCC6Q03468 1493 aa3.98□□□□□ -1.77
MDC1-208ENST00000494654 PPP1R37O75864 691 aa3.98□□□□□ -1.77
MDC1-208ENST00000494654 HS6ST3Q8IZP7 471 aa3.98□□□□□ -1.77
MDC1-208ENST00000494654 CCER1Q8TC90 406 aaPredicted RBP3.98□□□□□ -1.77
MDC1-208ENST00000494654 MFRPQ9BY79 579 aa3.98□□□□□ -1.77
MDC1-208ENST00000494654 METRNQ9UJH8 293 aa3.98□□□□□ -1.77
MDC1-208ENST00000494654 IRX5P78411 483 aaPredicted RBP3.97□□□□□ -1.77
MDC1-208ENST00000494654 PDCD7Q8N8D1 485 aaKnown RBP3.97□□□□□ -1.77
MDC1-208ENST00000494654 FBXO22Q8NEZ5 403 aa3.97□□□□□ -1.77
MDC1-208ENST00000494654 ERICH6BQ5W0A0 696 aa3.96□□□□□ -1.78
MDC1-208ENST00000494654 PEG3Q9GZU2 1588 aa3.95□□□□□ -1.78
MDC1-208ENST00000494654 CLCN6P51797 869 aa3.95□□□□□ -1.78
MDC1-208ENST00000494654 YTHDC1Q96MU7 727 aaKnown RBP3.95□□□□□ -1.78
MDC1-208ENST00000494654 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP3.95□□□□□ -1.78
MDC1-208ENST00000494654 WIZO95785 1651 aa3.94□□□□□ -1.78
MDC1-208ENST00000494654 GTPBP6O43824 516 aaPredicted RBP3.94□□□□□ -1.78
MDC1-208ENST00000494654 ILDR1Q86SU0 546 aaPredicted RBP3.94□□□□□ -1.78
MDC1-208ENST00000494654 SLC39A7Q92504 469 aa3.94□□□□□ -1.78
MDC1-208ENST00000494654 CEP162Q5TB80 1403 aa3.94□□□□□ -1.78
MDC1-208ENST00000494654 RSF1Q96T23 1441 aaPredicted RBP3.94□□□□□ -1.78
MDC1-208ENST00000494654 SMARCA2P51531 1590 aa3.93□□□□□ -1.78
MDC1-208ENST00000494654 CUX2O14529 1486 aa3.93□□□□□ -1.78
MDC1-208ENST00000494654 NESP48681 1621 aa3.93□□□□□ -1.78
MDC1-208ENST00000494654 MKRN3Q13064 507 aaKnown RBP3.93□□□□□ -1.78
MDC1-208ENST00000494654 UBE2Q2Q8WVN8 375 aa3.93□□□□□ -1.78
MDC1-208ENST00000494654 FANCIQ9NVI1 1328 aa3.93□□□□□ -1.78
MDC1-208ENST00000494654 SEC24BO95487 1268 aa3.92□□□□□ -1.78
MDC1-208ENST00000494654 C7P10643 843 aa3.92□□□□□ -1.78
MDC1-208ENST00000494654 GOLGA2Q08379 1002 aa3.92□□□□□ -1.78
MDC1-208ENST00000494654 OCEL1Q9H607 264 aa3.92□□□□□ -1.78
MDC1-208ENST00000494654 EEA1Q15075 1411 aa3.92□□□□□ -1.78
MDC1-208ENST00000494654 CFAP43Q8NDM7 1665 aa3.91□□□□□ -1.78
MDC1-208ENST00000494654 SYNJ1O43426 1573 aa3.91□□□□□ -1.78
MDC1-208ENST00000494654 PLCG2P16885 1265 aa3.91□□□□□ -1.78
MDC1-208ENST00000494654 IER5LQ5T953 404 aa3.91□□□□□ -1.78
MDC1-208ENST00000494654 TMEM92Q6UXU6 159 aa3.91□□□□□ -1.78
MDC1-208ENST00000494654 PAXIP1Q6ZW49 1069 aaPredicted RBP3.91□□□□□ -1.78
MDC1-208ENST00000494654 CADPS2Q86UW7 1296 aa3.91□□□□□ -1.78
MDC1-208ENST00000494654 OTUD5Q96G74 571 aa3.91□□□□□ -1.78
MDC1-208ENST00000494654 CFAP44Q96MT7 982 aa3.91□□□□□ -1.78
MDC1-208ENST00000494654 GOLGA3Q08378 1498 aa3.91□□□□□ -1.78
MDC1-208ENST00000494654 SOX12O15370 315 aa3.9□□□□□ -1.79
MDC1-208ENST00000494654 LHX8Q68G74 356 aa3.9□□□□□ -1.79
MDC1-208ENST00000494654 BBXQ8WY36 941 aaPredicted RBP3.9□□□□□ -1.79
MDC1-208ENST00000494654 BAZ1BQ9UIG0 1483 aaKnown RBP3.9□□□□□ -1.79
MDC1-208ENST00000494654 PRDM2Q13029 1718 aa3.9□□□□□ -1.79
MDC1-208ENST00000494654 ABCC8Q09428 1581 aa3.89□□□□□ -1.79
MDC1-208ENST00000494654 NLRP6P59044 892 aa3.89□□□□□ -1.79
MDC1-208ENST00000494654 MICALL2Q8IY33 904 aa3.89□□□□□ -1.79
MDC1-208ENST00000494654 TOP2AP11388 1531 aaKnown RBP3.89□□□□□ -1.79
MDC1-208ENST00000494654 TNIKQ9UKE5 1360 aa3.89□□□□□ -1.79
MDC1-208ENST00000494654 ABCA5Q8WWZ7 1642 aa3.88□□□□□ -1.79
MDC1-208ENST00000494654 TAOK2Q9UL54 1235 aa3.88□□□□□ -1.79
MDC1-208ENST00000494654 RBM19Q9Y4C8 960 aaKnown RBP3.88□□□□□ -1.79
MDC1-208ENST00000494654 BOLA1Q9Y3E2 137 aa3.87□□□□□ -1.79
MDC1-208ENST00000494654 DEKP35659 375 aaKnown RBP3.86□□□□□ -1.79
MDC1-208ENST00000494654 TMEM121BQ9BXQ6 578 aaPredicted RBP3.86□□□□□ -1.79
MDC1-208ENST00000494654 ANO8Q9HCE9 1232 aaPredicted RBP3.86□□□□□ -1.79
MDC1-208ENST00000494654 VPS8Q8N3P4 1428 aa3.86□□□□□ -1.79
MDC1-208ENST00000494654 MAPKBP1O60336 1514 aa3.85□□□□□ -1.79
MDC1-208ENST00000494654 BIVM-ERCC5R4GMW8 1640 aa3.85□□□□□ -1.79
MDC1-208ENST00000494654 PLCB2Q00722 1185 aa3.85□□□□□ -1.79
MDC1-208ENST00000494654 SPRYD3Q8NCJ5 442 aa3.85□□□□□ -1.79
MDC1-208ENST00000494654 NCKAP5LQ9HCH0 1330 aa3.85□□□□□ -1.79
MDC1-208ENST00000494654 DHX57Q6P158 1386 aaKnown RBP3.85□□□□□ -1.79
MDC1-208ENST00000494654 CEP164Q9UPV0 1460 aa3.85□□□□□ -1.79
MDC1-208ENST00000494654 ERICH3Q5RHP9 1530 aa3.85□□□□□ -1.79
MDC1-208ENST00000494654 MROH2BQ7Z745 1585 aa3.85□□□□□ -1.79
MDC1-208ENST00000494654 THOC2Q8NI27 1593 aaKnown RBP3.85□□□□□ -1.79
MDC1-208ENST00000494654 KIF21AQ7Z4S6 1674 aa3.84□□□□□ -1.79
MDC1-208ENST00000494654 C2orf72A6NCS6 295 aa3.84□□□□□ -1.79
MDC1-208ENST00000494654 SLC24A1O60721 1099 aa3.84□□□□□ -1.79
MDC1-208ENST00000494654 NEFLP07196 543 aa3.84□□□□□ -1.79
MDC1-208ENST00000494654 SMARCA4P51532 1647 aa3.84□□□□□ -1.8
MDC1-208ENST00000494654 EIF5BO60841 1220 aaKnown RBP3.83□□□□□ -1.8
MDC1-208ENST00000494654 SLAIN1Q8ND83 568 aa3.83□□□□□ -1.8
MDC1-208ENST00000494654 ZBTB4Q9P1Z0 1013 aaPredicted RBP3.83□□□□□ -1.8
MDC1-208ENST00000494654 DAXXQ9UER7 740 aaPredicted RBP3.83□□□□□ -1.8
MDC1-208ENST00000494654 SALL2Q9Y467 1007 aaPredicted RBP3.83□□□□□ -1.8
MDC1-208ENST00000494654 NCAPD3P42695 1498 aa3.83□□□□□ -1.8
MDC1-208ENST00000494654 GCC2Q8IWJ2 1684 aa3.83□□□□□ -1.8
MDC1-208ENST00000494654 WDR97A6NE52 1622 aa3.82□□□□□ -1.8
MDC1-208ENST00000494654 HECW1Q76N89 1606 aa3.82□□□□□ -1.8
MDC1-208ENST00000494654 CCDC88BA6NC98 1476 aa3.82□□□□□ -1.8
MDC1-208ENST00000494654 RRBP1Q9P2E9 1410 aaKnown RBP3.82□□□□□ -1.8
MDC1-208ENST00000494654 KIF3CO14782 793 aa3.82□□□□□ -1.8
MDC1-208ENST00000494654 HAP1P54257 671 aaPredicted RBP3.82□□□□□ -1.8
MDC1-208ENST00000494654 LCE2DQ5TA82 110 aaPredicted RBP3.82□□□□□ -1.8
MDC1-208ENST00000494654 PKNOX2Q96KN3 472 aa3.82□□□□□ -1.8
MDC1-208ENST00000494654 KDM2AQ9Y2K7 1162 aa3.82□□□□□ -1.8
MDC1-208ENST00000494654 CTTNBP2Q8WZ74 1663 aa3.81□□□□□ -1.8
MDC1-208ENST00000494654 DSG2Q14126 1118 aa3.81□□□□□ -1.8
MDC1-208ENST00000494654 C3orf67Q6ZVT6 689 aa3.81□□□□□ -1.8
MDC1-208ENST00000494654 L3MBTL3Q96JM7 780 aaPredicted RBP3.81□□□□□ -1.8
MDC1-208ENST00000494654 CRISPLD2Q9H0B8 497 aa3.81□□□□□ -1.8
MDC1-208ENST00000494654 HOXB3P14651 431 aaPredicted RBP3.8□□□□□ -1.8
MDC1-208ENST00000494654 CYB5RLQ6IPT4 315 aa3.8□□□□□ -1.8
MDC1-208ENST00000494654 KHSRPQ92945 711 aaKnown RBP eCLIP3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms