RNA–Protein interactions for RNA: ENST00000493594.6

GBP3-208, Transcript of guanylate binding protein 3, humanhuman

TSL 1 (best)

Gene GBP3, Length 2,561 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBP3-208ENST00000493594 BRPF3Q9ULD4 1205 aa11.17□□□□□ -0.62
GBP3-208ENST00000493594 SKAP1Q86WV1 359 aa11.16□□□□□ -0.62
GBP3-208ENST00000493594 PNISRQ8TF01 805 aaKnown RBP11.16□□□□□ -0.62
GBP3-208ENST00000493594 USP35Q9P2H5 1018 aa11.16□□□□□ -0.62
GBP3-208ENST00000493594 TCERG1O14776 1098 aaKnown RBP11.16□□□□□ -0.62
GBP3-208ENST00000493594 BACH2Q9BYV9 841 aa11.16□□□□□ -0.62
GBP3-208ENST00000493594 HMGXB3Q12766 1538 aa11.15□□□□□ -0.62
GBP3-208ENST00000493594 KDM6BO15054 1643 aa11.15□□□□□ -0.62
GBP3-208ENST00000493594 ARID3CA6NKF2 412 aa11.15□□□□□ -0.63
GBP3-208ENST00000493594 SNAPC4Q5SXM2 1469 aa11.14□□□□□ -0.63
GBP3-208ENST00000493594 PPM1GO15355 546 aaPredicted RBP11.14□□□□□ -0.63
GBP3-208ENST00000493594 EIF5BO60841 1220 aaKnown RBP11.14□□□□□ -0.63
GBP3-208ENST00000493594 RRP1P56182 461 aaKnown RBP11.14□□□□□ -0.63
GBP3-208ENST00000493594 EFCAB5A4FU69 1503 aa11.14□□□□□ -0.63
GBP3-208ENST00000493594 DHX29Q7Z478 1369 aaKnown RBP11.14□□□□□ -0.63
GBP3-208ENST00000493594 WASHC2CQ9Y4E1 1318 aa11.13□□□□□ -0.63
GBP3-208ENST00000493594 SPATA31E1Q6ZUB1 1445 aa11.13□□□□□ -0.63
GBP3-208ENST00000493594 RAD54L2Q9Y4B4 1467 aa11.13□□□□□ -0.63
GBP3-208ENST00000493594 SLC4A3P48751 1232 aa11.13□□□□□ -0.63
GBP3-208ENST00000493594 SLC4A1APQ9BWU0 796 aaKnown RBP11.12□□□□□ -0.63
GBP3-208ENST00000493594 GSE1Q14687 1217 aa11.12□□□□□ -0.63
GBP3-208ENST00000493594 RCAN3Q9UKA8 241 aa11.11□□□□□ -0.63
GBP3-208ENST00000493594 ANKRD30BQ9BXX2 1392 aa11.11□□□□□ -0.63
GBP3-208ENST00000493594 CADPSQ9ULU8 1353 aa11.1□□□□□ -0.63
GBP3-208ENST00000493594 PLIN1O60240 522 aa11.1□□□□□ -0.63
GBP3-208ENST00000493594 HECW1Q76N89 1606 aa11.1□□□□□ -0.63
GBP3-208ENST00000493594 NFKBIBQ15653 356 aa11.09□□□□□ -0.63
GBP3-208ENST00000493594 RPRD2Q5VT52 1461 aaKnown RBP11.09□□□□□ -0.63
GBP3-208ENST00000493594 SUPT6HQ7KZ85 1726 aaKnown RBP11.09□□□□□ -0.63
GBP3-208ENST00000493594 LRRIQ1Q96JM4 1722 aa11.09□□□□□ -0.63
GBP3-208ENST00000493594 FRAT1Q92837 279 aaPredicted RBP11.08□□□□□ -0.64
GBP3-208ENST00000493594 MS4A1P11836 297 aa11.08□□□□□ -0.64
GBP3-208ENST00000493594 USP47Q96K76 1375 aa11.07□□□□□ -0.64
GBP3-208ENST00000493594 TEX14Q8IWB6 1497 aa11.07□□□□□ -0.64
GBP3-208ENST00000493594 CDCA7LQ96GN5 454 aa11.07□□□□□ -0.64
GBP3-208ENST00000493594 UBE2Q2Q8WVN8 375 aa11.06□□□□□ -0.64
GBP3-208ENST00000493594 MAGI3Q5TCQ9 1506 aa11.06□□□□□ -0.64
GBP3-208ENST00000493594 UGGT2Q9NYU1 1516 aa11.06□□□□□ -0.64
GBP3-208ENST00000493594 DAXXQ9UER7 740 aaPredicted RBP11.06□□□□□ -0.64
GBP3-208ENST00000493594 GRIN2BQ13224 1484 aa11.06□□□□□ -0.64
GBP3-208ENST00000493594 EHBP1L1Q8N3D4 1523 aa11.05□□□□□ -0.64
GBP3-208ENST00000493594 GCC2Q8IWJ2 1684 aa11.05□□□□□ -0.64
GBP3-208ENST00000493594 DDRGK1Q96HY6 314 aa11.05□□□□□ -0.64
GBP3-208ENST00000493594 ABCA5Q8WWZ7 1642 aa11.05□□□□□ -0.64
GBP3-208ENST00000493594 CTTNBP2Q8WZ74 1663 aa11.04□□□□□ -0.64
GBP3-208ENST00000493594 ZNF644Q9H582 1327 aaPredicted RBP11.03□□□□□ -0.64
GBP3-208ENST00000493594 BCORL1Q5H9F3 1711 aa11.03□□□□□ -0.64
GBP3-208ENST00000493594 MIA2Q96PC5 1412 aa11.03□□□□□ -0.64
GBP3-208ENST00000493594 CRBNQ96SW2 442 aa11.03□□□□□ -0.64
GBP3-208ENST00000493594 TCOF1Q13428 1488 aaKnown RBP11.02□□□□□ -0.65
GBP3-208ENST00000493594 POLR1AO95602 1720 aaPredicted RBP11.02□□□□□ -0.65
GBP3-208ENST00000493594 PRDM2Q13029 1718 aa11.02□□□□□ -0.65
GBP3-208ENST00000493594 LRPPRCP42704 1394 aaKnown RBP11.02□□□□□ -0.65
GBP3-208ENST00000493594 CARD11Q9BXL7 1154 aa11.02□□□□□ -0.65
GBP3-208ENST00000493594 MYBBP1AQ9BQG0 1328 aaKnown RBP11.02□□□□□ -0.65
GBP3-208ENST00000493594 POLA1P09884 1462 aaPredicted RBP11.01□□□□□ -0.65
GBP3-208ENST00000493594 ABCA10Q8WWZ4 1543 aa11.01□□□□□ -0.65
GBP3-208ENST00000493594 KDM2AQ9Y2K7 1162 aa11.01□□□□□ -0.65
GBP3-208ENST00000493594 TDRD9Q8NDG6 1382 aaKnown RBP11.01□□□□□ -0.65
GBP3-208ENST00000493594 KIF15Q9NS87 1388 aa11.01□□□□□ -0.65
GBP3-208ENST00000493594 FANCD2Q9BXW9 1451 aa11□□□□□ -0.65
GBP3-208ENST00000493594 ARHGEF11O15085 1522 aa11□□□□□ -0.65
GBP3-208ENST00000493594 ST20-MTHFSA0A0A6YYL1 179 aa11□□□□□ -0.65
GBP3-208ENST00000493594 FRAT2O75474 233 aaPredicted RBP11□□□□□ -0.65
GBP3-208ENST00000493594 BRD4O60885 1362 aaPredicted RBP10.99□□□□□ -0.65
GBP3-208ENST00000493594 C20orf194Q5TEA3 1177 aa10.99□□□□□ -0.65
GBP3-208ENST00000493594 RALBP1Q15311 655 aa10.98□□□□□ -0.65
GBP3-208ENST00000493594 ARID4BQ4LE39 1312 aaPredicted RBP10.98□□□□□ -0.65
GBP3-208ENST00000493594 PKD2Q13563 968 aa10.98□□□□□ -0.65
GBP3-208ENST00000493594 CUL7Q14999 1698 aa10.98□□□□□ -0.65
GBP3-208ENST00000493594 SAMD9Q5K651 1589 aa10.97□□□□□ -0.65
GBP3-208ENST00000493594 PDE3BQ13370 1112 aa10.97□□□□□ -0.65
GBP3-208ENST00000493594 DCAF11Q8TEB1 546 aa10.97□□□□□ -0.65
GBP3-208ENST00000493594 CC2D2AQ9P2K1 1620 aa10.97□□□□□ -0.65
GBP3-208ENST00000493594 ROCK2O75116 1388 aaKnown RBP10.97□□□□□ -0.65
GBP3-208ENST00000493594 DAPK1P53355 1430 aa10.96□□□□□ -0.65
GBP3-208ENST00000493594 CDK13Q14004 1512 aaKnown RBP10.96□□□□□ -0.66
GBP3-208ENST00000493594 ABCC5O15440 1437 aa10.96□□□□□ -0.66
GBP3-208ENST00000493594 TOPBP1Q92547 1522 aa10.95□□□□□ -0.66
GBP3-208ENST00000493594 NLRP13Q86W25 1043 aa10.95□□□□□ -0.66
GBP3-208ENST00000493594 RGS3P49796 1198 aa10.95□□□□□ -0.66
GBP3-208ENST00000493594 CC2D1BQ5T0F9 858 aaKnown RBP10.95□□□□□ -0.66
GBP3-208ENST00000493594 THOC2Q8NI27 1593 aaKnown RBP10.95□□□□□ -0.66
GBP3-208ENST00000493594 EPRSP07814 1512 aaKnown RBP10.94□□□□□ -0.66
GBP3-208ENST00000493594 ROCK1Q13464 1354 aa10.94□□□□□ -0.66
GBP3-208ENST00000493594 ZNF777Q9ULD5 760 aaPredicted RBP10.93□□□□□ -0.66
GBP3-208ENST00000493594 KDM5CP41229 1560 aa10.93□□□□□ -0.66
GBP3-208ENST00000493594 DNMBPQ6XZF7 1577 aa10.93□□□□□ -0.66
GBP3-208ENST00000493594 FAM161AQ3B820 660 aa10.93□□□□□ -0.66
GBP3-208ENST00000493594 C8orf34Q49A92 452 aa10.93□□□□□ -0.66
GBP3-208ENST00000493594 PZPP20742 1482 aa10.92□□□□□ -0.66
GBP3-208ENST00000493594 MBD5Q9P267 1494 aa10.92□□□□□ -0.66
GBP3-208ENST00000493594 FAM43AQ8N2R8 423 aa10.91□□□□□ -0.66
GBP3-208ENST00000493594 RSPH6AQ9H0K4 717 aa10.91□□□□□ -0.66
GBP3-208ENST00000493594 KTN1Q86UP2 1357 aaKnown RBP10.91□□□□□ -0.66
GBP3-208ENST00000493594 KDM2BQ8NHM5 1336 aa10.91□□□□□ -0.66
GBP3-208ENST00000493594 KIAA1107Q9UPP5 1409 aa10.9□□□□□ -0.66
GBP3-208ENST00000493594 CENPQQ7L2Z9 268 aaPredicted RBP10.9□□□□□ -0.66
GBP3-208ENST00000493594 NESP48681 1621 aa10.89□□□□□ -0.67
GBP3-208ENST00000493594 ARXQ96QS3 562 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms