RNA–Protein interactions for RNA: ENST00000493278.1

CALU-204, Transcript of calumenin, humanhuman

TSL 3

Gene CALU, Length 589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALU-204ENST00000493278 WRNQ14191 1432 aaPredicted RBP eCLIP8.47□□□□□ -1.05
CALU-204ENST00000493278 HOXB3P14651 431 aaPredicted RBP8.47□□□□□ -1.05
CALU-204ENST00000493278 HOXB1P14653 301 aaPredicted RBP8.47□□□□□ -1.05
CALU-204ENST00000493278 ABCC8Q09428 1581 aa8.47□□□□□ -1.05
CALU-204ENST00000493278 GSE1Q14687 1217 aa8.46□□□□□ -1.06
CALU-204ENST00000493278 DCAF8Q5TAQ9 597 aa8.46□□□□□ -1.06
CALU-204ENST00000493278 TRIM41Q8WV44 630 aa8.45□□□□□ -1.06
CALU-204ENST00000493278 EEA1Q15075 1411 aa8.45□□□□□ -1.06
CALU-204ENST00000493278 SYNJ1O43426 1573 aa8.44□□□□□ -1.06
CALU-204ENST00000493278 CHRM1P11229 460 aaPredicted RBP8.44□□□□□ -1.06
CALU-204ENST00000493278 KLHL34Q8N239 644 aa8.44□□□□□ -1.06
CALU-204ENST00000493278 PTGER2P43116 358 aa8.43□□□□□ -1.06
CALU-204ENST00000493278 PYGBP11216 843 aa8.41□□□□□ -1.06
CALU-204ENST00000493278 ZNF710Q8N1W2 664 aa8.41□□□□□ -1.06
CALU-204ENST00000493278 CUX1P39880 1505 aa8.4□□□□□ -1.06
CALU-204ENST00000493278 FANCD2Q9BXW9 1451 aa8.4□□□□□ -1.06
CALU-204ENST00000493278 VARS2Q5ST30 1063 aaKnown RBP8.4□□□□□ -1.06
CALU-204ENST00000493278 IFNLR1Q8IU57 520 aaPredicted RBP8.4□□□□□ -1.06
CALU-204ENST00000493278 DNMBPQ6XZF7 1577 aa8.39□□□□□ -1.07
CALU-204ENST00000493278 PDS5BQ9NTI5 1447 aa8.39□□□□□ -1.07
CALU-204ENST00000493278 ZNF467Q7Z7K2 595 aaPredicted RBP8.38□□□□□ -1.07
CALU-204ENST00000493278 SPOCK2Q92563 424 aa8.38□□□□□ -1.07
CALU-204ENST00000493278 PCDHB8Q9UN66 801 aa8.38□□□□□ -1.07
CALU-204ENST00000493278 CEP164Q9UPV0 1460 aa8.38□□□□□ -1.07
CALU-204ENST00000493278 MKRN3Q13064 507 aaKnown RBP8.37□□□□□ -1.07
CALU-204ENST00000493278 KIF21AQ7Z4S6 1674 aa8.37□□□□□ -1.07
CALU-204ENST00000493278 ZNF687Q8N1G0 1237 aa8.36□□□□□ -1.07
CALU-204ENST00000493278 PLA2G2EQ9NZK7 142 aa8.36□□□□□ -1.07
CALU-204ENST00000493278 DOK7Q18PE1 504 aa8.35□□□□□ -1.07
CALU-204ENST00000493278 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.35□□□□□ -1.071e-6■■□□□ 13.4
CALU-204ENST00000493278 NESP48681 1621 aa8.35□□□□□ -1.07
CALU-204ENST00000493278 KIF21BO75037 1637 aa8.33□□□□□ -1.08
CALU-204ENST00000493278 GOLGA2Q08379 1002 aa8.33□□□□□ -1.08
CALU-204ENST00000493278 TOPBP1Q92547 1522 aa8.33□□□□□ -1.08
CALU-204ENST00000493278 WDR97A6NE52 1622 aa8.32□□□□□ -1.08
CALU-204ENST00000493278 ILDR1Q86SU0 546 aaPredicted RBP8.3□□□□□ -1.08
CALU-204ENST00000493278 FGD5Q6ZNL6 1462 aa8.3□□□□□ -1.08
CALU-204ENST00000493278 URB2Q14146 1524 aaKnown RBP8.29□□□□□ -1.08
CALU-204ENST00000493278 ERICH3Q5RHP9 1530 aa8.29□□□□□ -1.08
CALU-204ENST00000493278 ABCA10Q8WWZ4 1543 aa8.29□□□□□ -1.08
CALU-204ENST00000493278 MRC2Q9UBG0 1479 aa8.29□□□□□ -1.08
CALU-204ENST00000493278 WDR62O43379 1518 aa8.29□□□□□ -1.08
CALU-204ENST00000493278 KIF27Q86VH2 1401 aa8.29□□□□□ -1.08
CALU-204ENST00000493278 POLA1P09884 1462 aaPredicted RBP8.28□□□□□ -1.08
CALU-204ENST00000493278 RIMBP2O15034 1052 aa8.28□□□□□ -1.08
CALU-204ENST00000493278 DPY19L2Q6NUT2 758 aa8.28□□□□□ -1.08
CALU-204ENST00000493278 ANKRD13DQ6ZTN6 518 aa8.28□□□□□ -1.08
CALU-204ENST00000493278 SOGA1O94964 1423 aa8.28□□□□□ -1.08
CALU-204ENST00000493278 PSEN1P49768 467 aa8.26□□□□□ -1.09
CALU-204ENST00000493278 PDAP1Q13442 181 aaKnown RBP8.26□□□□□ -1.09
CALU-204ENST00000493278 BOLA1Q9Y3E2 137 aa8.26□□□□□ -1.09
CALU-204ENST00000493278 THOC2Q8NI27 1593 aaKnown RBP8.26□□□□□ -1.09
CALU-204ENST00000493278 GOLGA3Q08378 1498 aa8.26□□□□□ -1.09
CALU-204ENST00000493278 ABCA5Q8WWZ7 1642 aa8.25□□□□□ -1.09
CALU-204ENST00000493278 CUL7Q14999 1698 aa8.25□□□□□ -1.09
CALU-204ENST00000493278 CIZ1Q9ULV3 898 aaPredicted RBP8.25□□□□□ -1.09
CALU-204ENST00000493278 TARBP1Q13395 1621 aaKnown RBP8.25□□□□□ -1.09
CALU-204ENST00000493278 G3V3G9 751 aa8.24□□□□□ -1.09
CALU-204ENST00000493278 PRXQ9BXM0 1461 aa8.24□□□□□ -1.09
CALU-204ENST00000493278 RUSC2Q8N2Y8 1516 aa8.23□□□□□ -1.09
CALU-204ENST00000493278 CUX2O14529 1486 aa8.22□□□□□ -1.09
CALU-204ENST00000493278 ZSWIM6Q9HCJ5 1215 aa8.22□□□□□ -1.09
CALU-204ENST00000493278 TNIKQ9UKE5 1360 aa8.22□□□□□ -1.09
CALU-204ENST00000493278 ERCC6Q03468 1493 aa8.2□□□□□ -1.1
CALU-204ENST00000493278 HCSTQ9UBK5 93 aa8.2□□□□□ -1.1
CALU-204ENST00000493278 IFT140Q96RY7 1462 aa8.19□□□□□ -1.1
CALU-204ENST00000493278 PBRM1Q86U86 1689 aa8.19□□□□□ -1.1
CALU-204ENST00000493278 LSM11P83369 360 aaKnown RBP eCLIP8.19□□□□□ -1.1
CALU-204ENST00000493278 GPR153Q6NV75 609 aa8.19□□□□□ -1.1
CALU-204ENST00000493278 IGF1RP08069 1367 aa8.16□□□□□ -1.1
CALU-204ENST00000493278 GAPVD1Q14C86 1478 aa8.16□□□□□ -1.1
CALU-204ENST00000493278 RAD54L2Q9Y4B4 1467 aa8.16□□□□□ -1.1
CALU-204ENST00000493278 RAPGEF2Q9Y4G8 1499 aa8.16□□□□□ -1.1
CALU-204ENST00000493278 CTTNBP2Q8WZ74 1663 aa8.15□□□□□ -1.1
CALU-204ENST00000493278 LOC105371045A0A1W2PR82 267 aa8.15□□□□□ -1.1
CALU-204ENST00000493278 FAM9AQ8IZU1 332 aaPredicted RBP8.15□□□□□ -1.1
CALU-204ENST00000493278 CEP162Q5TB80 1403 aa8.13□□□□□ -1.11
CALU-204ENST00000493278 CABP2Q9NPB3 220 aa8.13□□□□□ -1.11
CALU-204ENST00000493278 ADAMTS12P58397 1594 aa8.13□□□□□ -1.11
CALU-204ENST00000493278 CARMIL1Q5VZK9 1371 aa8.12□□□□□ -1.11
CALU-204ENST00000493278 EIF4G3O43432 1585 aaKnown RBP8.12□□□□□ -1.11
CALU-204ENST00000493278 GRIN2BQ13224 1484 aa8.12□□□□□ -1.11
CALU-204ENST00000493278 RIOK3O14730 519 aaKnown RBP8.11□□□□□ -1.11
CALU-204ENST00000493278 RNF25Q96BH1 459 aaPredicted RBP8.11□□□□□ -1.11
CALU-204ENST00000493278 IRX2Q9BZI1 471 aaPredicted RBP8.11□□□□□ -1.11
CALU-204ENST00000493278 MAGI1Q96QZ7 1491 aaPredicted RBP8.1□□□□□ -1.11
CALU-204ENST00000493278 ZNF316A6NFI3 1004 aaPredicted RBP8.09□□□□□ -1.11
CALU-204ENST00000493278 VGFO15240 615 aaPredicted RBP8.09□□□□□ -1.11
CALU-204ENST00000493278 FHAD1B1AJZ9 1412 aa8.09□□□□□ -1.11
CALU-204ENST00000493278 EFCAB5A4FU69 1503 aa8.08□□□□□ -1.12
CALU-204ENST00000493278 TMEM92Q6UXU6 159 aa8.08□□□□□ -1.12
CALU-204ENST00000493278 CLIP1P30622 1438 aa8.08□□□□□ -1.12
CALU-204ENST00000493278 UBTFP17480 764 aaKnown RBP8.07□□□□□ -1.12
CALU-204ENST00000493278 ARSIQ5FYB1 569 aa8.07□□□□□ -1.12
CALU-204ENST00000493278 RGS20O76081 388 aa8.06□□□□□ -1.12
CALU-204ENST00000493278 TDRD9Q8NDG6 1382 aaKnown RBP8.06□□□□□ -1.12
CALU-204ENST00000493278 ZNF608Q9ULD9 1512 aaPredicted RBP8.05□□□□□ -1.12
CALU-204ENST00000493278 SOX12O15370 315 aa8.05□□□□□ -1.12
CALU-204ENST00000493278 PBX2P40425 430 aa8.05□□□□□ -1.12
CALU-204ENST00000493278 EFCAB3Q8N7B9 438 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms