RNA–Protein interactions for RNA: ENST00000489266.5

NSMCE4A-211, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 1 (best)

Gene NSMCE4A, Length 2,399 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-211ENST00000489266 CARMIL1Q5VZK9 1371 aa28.32■■■□□ 2.12
NSMCE4A-211ENST00000489266 CASKIN1Q8WXD9 1431 aa28.3■■■□□ 2.12
NSMCE4A-211ENST00000489266 ABCA5Q8WWZ7 1642 aa28.29■■■□□ 2.12
NSMCE4A-211ENST00000489266 ATP1B4Q9UN42 357 aaPredicted RBP28.28■■■□□ 2.12
NSMCE4A-211ENST00000489266 POLR1AO95602 1720 aaPredicted RBP28.24■■■□□ 2.11
NSMCE4A-211ENST00000489266 DCAF11Q8TEB1 546 aa28.22■■■□□ 2.11
NSMCE4A-211ENST00000489266 ZMYND15Q9H091 742 aa28.21■■■□□ 2.11
NSMCE4A-211ENST00000489266 P3H3Q8IVL6 736 aa28.2■■■□□ 2.1
NSMCE4A-211ENST00000489266 EXOC6Q8TAG9 804 aa28.2■■■□□ 2.1
NSMCE4A-211ENST00000489266 NESP48681 1621 aa28.19■■■□□ 2.1
NSMCE4A-211ENST00000489266 DNMBPQ6XZF7 1577 aa28.19■■■□□ 2.1
NSMCE4A-211ENST00000489266 KIF7Q2M1P5 1343 aa28.18■■■□□ 2.1
NSMCE4A-211ENST00000489266 DENND4BO75064 1496 aaPredicted RBP28.18■■■□□ 2.1
NSMCE4A-211ENST00000489266 RRP1P56182 461 aaKnown RBP28.18■■■□□ 2.1
NSMCE4A-211ENST00000489266 FHOD3Q2V2M9 1422 aa28.17■■■□□ 2.1
NSMCE4A-211ENST00000489266 HECW1Q76N89 1606 aa28.17■■■□□ 2.1
NSMCE4A-211ENST00000489266 L3MBTL2Q969R5 705 aa28.16■■■□□ 2.1
NSMCE4A-211ENST00000489266 EFCAB5A4FU69 1503 aa28.16■■■□□ 2.1
NSMCE4A-211ENST00000489266 VSIG10Q8N0Z9 540 aa28.15■■■□□ 2.1
NSMCE4A-211ENST00000489266 SPATA31E1Q6ZUB1 1445 aa28.14■■■□□ 2.09
NSMCE4A-211ENST00000489266 TOPBP1Q92547 1522 aa28.13■■■□□ 2.09
NSMCE4A-211ENST00000489266 LAMC3Q9Y6N6 1575 aa28.11■■■□□ 2.09
NSMCE4A-211ENST00000489266 MYOM3Q5VTT5 1437 aa28.09■■■□□ 2.09
NSMCE4A-211ENST00000489266 ABCA10Q8WWZ4 1543 aa28.09■■■□□ 2.09
NSMCE4A-211ENST00000489266 DHX29Q7Z478 1369 aaKnown RBP28.09■■■□□ 2.09
NSMCE4A-211ENST00000489266 SLC4A3P48751 1232 aa28.09■■■□□ 2.09
NSMCE4A-211ENST00000489266 MTUS2Q5JR59 1369 aa28.08■■■□□ 2.09
NSMCE4A-211ENST00000489266 POLA1P09884 1462 aaPredicted RBP28.08■■■□□ 2.09
NSMCE4A-211ENST00000489266 RAD54L2Q9Y4B4 1467 aa28.08■■■□□ 2.08
NSMCE4A-211ENST00000489266 FRAT2O75474 233 aaPredicted RBP28.06■■■□□ 2.08
NSMCE4A-211ENST00000489266 RRAGDQ9NQL2 400 aaPredicted RBP28.06■■■□□ 2.08
NSMCE4A-211ENST00000489266 DAXXQ9UER7 740 aaPredicted RBP28.06■■■□□ 2.08
NSMCE4A-211ENST00000489266 PNISRQ8TF01 805 aaKnown RBP28.04■■■□□ 2.08
NSMCE4A-211ENST00000489266 GCC2Q8IWJ2 1684 aa28.04■■■□□ 2.08
NSMCE4A-211ENST00000489266 NBPF8Q3BBV2 869 aa28.02■■■□□ 2.08
NSMCE4A-211ENST00000489266 SENP3-EIF4A1A0A087X0R7 540 aa28■■■□□ 2.07
NSMCE4A-211ENST00000489266 MPHOSPH9Q99550 1183 aa28■■■□□ 2.07
NSMCE4A-211ENST00000489266 SNAPC4Q5SXM2 1469 aa28■■■□□ 2.07
NSMCE4A-211ENST00000489266 RCAN3Q9UKA8 241 aa27.99■■■□□ 2.07
NSMCE4A-211ENST00000489266 RRP7BPQ9NSQ0 103 aa27.97■■■□□ 2.07
NSMCE4A-211ENST00000489266 MIA2Q96PC5 1412 aa27.96■■■□□ 2.07
NSMCE4A-211ENST00000489266 RRP9O43818 475 aaKnown RBP27.95■■■□□ 2.07
NSMCE4A-211ENST00000489266 RPRD2Q5VT52 1461 aaKnown RBP27.95■■■□□ 2.06
NSMCE4A-211ENST00000489266 PDS5BQ9NTI5 1447 aa27.94■■■□□ 2.06
NSMCE4A-211ENST00000489266 URB2Q14146 1524 aaKnown RBP27.94■■■□□ 2.06
NSMCE4A-211ENST00000489266 HSP90AA2PQ14568 343 aaPredicted RBP27.94■■■□□ 2.06
NSMCE4A-211ENST00000489266 TEX14Q8IWB6 1497 aa27.94■■■□□ 2.06
NSMCE4A-211ENST00000489266 SUPT6HQ7KZ85 1726 aaKnown RBP27.92■■■□□ 2.06
NSMCE4A-211ENST00000489266 LRPPRCP42704 1394 aaKnown RBP27.92■■■□□ 2.06
NSMCE4A-211ENST00000489266 DNAJC5BQ9UF47 199 aa27.92■■■□□ 2.06
NSMCE4A-211ENST00000489266 SKAP1Q86WV1 359 aa27.91■■■□□ 2.06
NSMCE4A-211ENST00000489266 TMC1Q8TDI8 760 aa27.89■■■□□ 2.06
NSMCE4A-211ENST00000489266 ANKRD30BQ9BXX2 1392 aa27.89■■■□□ 2.06
NSMCE4A-211ENST00000489266 TCOF1Q13428 1488 aaKnown RBP27.89■■■□□ 2.06
NSMCE4A-211ENST00000489266 KDM6BO15054 1643 aa27.89■■■□□ 2.06
NSMCE4A-211ENST00000489266 ARID4BQ4LE39 1312 aaPredicted RBP27.88■■■□□ 2.05
NSMCE4A-211ENST00000489266 CNGB1Q14028 1251 aaPredicted RBP27.87■■■□□ 2.05
NSMCE4A-211ENST00000489266 PODXL2Q9NZ53 605 aa27.87■■■□□ 2.05
NSMCE4A-211ENST00000489266 CUL7Q14999 1698 aa27.86■■■□□ 2.05
NSMCE4A-211ENST00000489266 EHBP1L1Q8N3D4 1523 aa27.86■■■□□ 2.05
NSMCE4A-211ENST00000489266 UGGT2Q9NYU1 1516 aa27.86■■■□□ 2.05
NSMCE4A-211ENST00000489266 HSP90AA1P07900 732 aaKnown RBP27.85■■■□□ 2.05
NSMCE4A-211ENST00000489266 ARHGEF11O15085 1522 aa27.85■■■□□ 2.05
NSMCE4A-211ENST00000489266 NAP1L5Q96NT1 182 aaPredicted RBP27.85■■■□□ 2.05
NSMCE4A-211ENST00000489266 L1TD1Q5T7N2 865 aaKnown RBP27.84■■■□□ 2.05
NSMCE4A-211ENST00000489266 CHIC2Q9UKJ5 165 aa27.84■■■□□ 2.05
NSMCE4A-211ENST00000489266 LRRIQ1Q96JM4 1722 aa27.83■■■□□ 2.05
NSMCE4A-211ENST00000489266 FOXD1Q16676 465 aa27.82■■■□□ 2.04
NSMCE4A-211ENST00000489266 POGKQ9P215 609 aa27.82■■■□□ 2.04
NSMCE4A-211ENST00000489266 THOC2Q8NI27 1593 aaKnown RBP27.81■■■□□ 2.04
NSMCE4A-211ENST00000489266 PDE3BQ13370 1112 aa27.8■■■□□ 2.04
NSMCE4A-211ENST00000489266 CTTNBP2Q8WZ74 1663 aa27.8■■■□□ 2.04
NSMCE4A-211ENST00000489266 PNNQ9H307 717 aaKnown RBP27.8■■■□□ 2.04
NSMCE4A-211ENST00000489266 FAM161AQ3B820 660 aa27.79■■■□□ 2.04
NSMCE4A-211ENST00000489266 BRD4O60885 1362 aaPredicted RBP27.79■■■□□ 2.04
NSMCE4A-211ENST00000489266 GRIN2BQ13224 1484 aa27.79■■■□□ 2.04
NSMCE4A-211ENST00000489266 BCORL1Q5H9F3 1711 aa27.78■■■□□ 2.04
NSMCE4A-211ENST00000489266 ROCK2O75116 1388 aaKnown RBP27.78■■■□□ 2.04
NSMCE4A-211ENST00000489266 C8orf34Q49A92 452 aa27.78■■■□□ 2.04
NSMCE4A-211ENST00000489266 CLCN1P35523 988 aa27.77■■■□□ 2.04
NSMCE4A-211ENST00000489266 CRBNQ96SW2 442 aa27.75■■■□□ 2.03
NSMCE4A-211ENST00000489266 KDM2BQ8NHM5 1336 aa27.75■■■□□ 2.03
NSMCE4A-211ENST00000489266 PLEKHG5O94827 1062 aa27.75■■■□□ 2.03
NSMCE4A-211ENST00000489266 KIF21AQ7Z4S6 1674 aa27.75■■■□□ 2.03
NSMCE4A-211ENST00000489266 KTN1Q86UP2 1357 aaKnown RBP27.74■■■□□ 2.03
NSMCE4A-211ENST00000489266 TDRD9Q8NDG6 1382 aaKnown RBP27.74■■■□□ 2.03
NSMCE4A-211ENST00000489266 KIF15Q9NS87 1388 aa27.72■■■□□ 2.03
NSMCE4A-211ENST00000489266 USP47Q96K76 1375 aa27.72■■■□□ 2.03
NSMCE4A-211ENST00000489266 GAPVD1Q14C86 1478 aa27.71■■■□□ 2.03
NSMCE4A-211ENST00000489266 MYBBP1AQ9BQG0 1328 aaKnown RBP27.7■■■□□ 2.03
NSMCE4A-211ENST00000489266 PLIN1O60240 522 aa27.7■■■□□ 2.03
NSMCE4A-211ENST00000489266 POLR3GLQ9BT43 218 aa27.68■■■□□ 2.02
NSMCE4A-211ENST00000489266 SAMD9Q5K651 1589 aa27.68■■■□□ 2.02
NSMCE4A-211ENST00000489266 RALBP1Q15311 655 aa27.68■■■□□ 2.02
NSMCE4A-211ENST00000489266 MBD5Q9P267 1494 aa27.66■■■□□ 2.02
NSMCE4A-211ENST00000489266 CENPQQ7L2Z9 268 aaPredicted RBP27.66■■■□□ 2.02
NSMCE4A-211ENST00000489266 KDM5CP41229 1560 aa27.64■■■□□ 2.02
NSMCE4A-211ENST00000489266 MAGI3Q5TCQ9 1506 aa27.63■■■□□ 2.01
NSMCE4A-211ENST00000489266 CDCA7LQ96GN5 454 aa27.62■■■□□ 2.01
NSMCE4A-211ENST00000489266 XRCC6P12956 609 aaKnown RBP eCLIP27.61■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms