RNA–Protein interactions for RNA: ENST00000488716.1

NME9-209, Transcript of NME/NM23 family member 9, humanhuman

TSL 3

Gene NME9, Length 688 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME9-209ENST00000488716 MRC2Q9UBG0 1479 aa13.09□□□□□ -0.31
NME9-209ENST00000488716 SOX12O15370 315 aa13.07□□□□□ -0.32
NME9-209ENST00000488716 P3H3Q8IVL6 736 aa13.07□□□□□ -0.32
NME9-209ENST00000488716 FGD5Q6ZNL6 1462 aa13.07□□□□□ -0.32
NME9-209ENST00000488716 PHF12Q96QT6 1004 aa13.06□□□□□ -0.32
NME9-209ENST00000488716 WDR62O43379 1518 aa13.06□□□□□ -0.32
NME9-209ENST00000488716 SOGA1O94964 1423 aa13.05□□□□□ -0.32
NME9-209ENST00000488716 POLA1P09884 1462 aaPredicted RBP13.05□□□□□ -0.32
NME9-209ENST00000488716 CADPS2Q86UW7 1296 aa13.05□□□□□ -0.32
NME9-209ENST00000488716 PHF8Q9UPP1 1060 aa13.03□□□□□ -0.32
NME9-209ENST00000488716 THOC2Q8NI27 1593 aaKnown RBP13.03□□□□□ -0.32
NME9-209ENST00000488716 GOLGA2Q08379 1002 aa13.02□□□□□ -0.33
NME9-209ENST00000488716 ERCC6Q03468 1493 aa13.02□□□□□ -0.33
NME9-209ENST00000488716 ABCA10Q8WWZ4 1543 aa13.02□□□□□ -0.33
NME9-209ENST00000488716 CUX2O14529 1486 aa13□□□□□ -0.33
NME9-209ENST00000488716 FBXO22Q8NEZ5 403 aa13□□□□□ -0.33
NME9-209ENST00000488716 KIF27Q86VH2 1401 aa12.99□□□□□ -0.33
NME9-209ENST00000488716 PPP1R37O75864 691 aa12.99□□□□□ -0.33
NME9-209ENST00000488716 RUSC2Q8N2Y8 1516 aa12.98□□□□□ -0.33
NME9-209ENST00000488716 WDR97A6NE52 1622 aa12.97□□□□□ -0.33
NME9-209ENST00000488716 TMEM106CQ9BVX2 250 aa12.96□□□□□ -0.33
NME9-209ENST00000488716 TARBP1Q13395 1621 aaKnown RBP12.95□□□□□ -0.34
NME9-209ENST00000488716 RAD54L2Q9Y4B4 1467 aa12.94□□□□□ -0.34
NME9-209ENST00000488716 KIF21BO75037 1637 aa12.93□□□□□ -0.34
NME9-209ENST00000488716 KCNV2Q8TDN2 545 aa12.93□□□□□ -0.34
NME9-209ENST00000488716 MS4A3Q96HJ5 214 aa12.93□□□□□ -0.34
NME9-209ENST00000488716 IFT140Q96RY7 1462 aa12.92□□□□□ -0.34
NME9-209ENST00000488716 C19orf67A6NJJ6 358 aa12.92□□□□□ -0.34
NME9-209ENST00000488716 ABCA5Q8WWZ7 1642 aa12.91□□□□□ -0.34
NME9-209ENST00000488716 PRXQ9BXM0 1461 aa12.91□□□□□ -0.34
NME9-209ENST00000488716 MKRN3Q13064 507 aaKnown RBP12.91□□□□□ -0.34
NME9-209ENST00000488716 FAM9AQ8IZU1 332 aaPredicted RBP12.91□□□□□ -0.34
NME9-209ENST00000488716 ERICH3Q5RHP9 1530 aa12.89□□□□□ -0.35
NME9-209ENST00000488716 IGF1RP08069 1367 aa12.88□□□□□ -0.35
NME9-209ENST00000488716 GOLGA3Q08378 1498 aa12.88□□□□□ -0.35
NME9-209ENST00000488716 TRPC6Q9Y210 931 aa12.87□□□□□ -0.35
NME9-209ENST00000488716 E2F4Q16254 413 aa12.85□□□□□ -0.35
NME9-209ENST00000488716 MS4A4AQ96JQ5 239 aa12.85□□□□□ -0.35
NME9-209ENST00000488716 GAPVD1Q14C86 1478 aa12.85□□□□□ -0.35
NME9-209ENST00000488716 LOC105371045A0A1W2PR82 267 aa12.84□□□□□ -0.35
NME9-209ENST00000488716 PDE4AP27815 886 aa12.84□□□□□ -0.35
NME9-209ENST00000488716 TIE1P35590 1138 aa12.83□□□□□ -0.36
NME9-209ENST00000488716 CUL7Q14999 1698 aa12.83□□□□□ -0.36
NME9-209ENST00000488716 TNIKQ9UKE5 1360 aa12.82□□□□□ -0.36
NME9-209ENST00000488716 TULP1O00294 542 aaPredicted RBP12.82□□□□□ -0.36
NME9-209ENST00000488716 RAPGEF2Q9Y4G8 1499 aa12.82□□□□□ -0.36
NME9-209ENST00000488716 TDRD9Q8NDG6 1382 aaKnown RBP12.81□□□□□ -0.36
NME9-209ENST00000488716 ARHGEF1Q92888 912 aaKnown RBP12.81□□□□□ -0.36
NME9-209ENST00000488716 LARP6Q9BRS8 491 aaKnown RBP12.81□□□□□ -0.36
NME9-209ENST00000488716 CARMIL1Q5VZK9 1371 aa12.8□□□□□ -0.36
NME9-209ENST00000488716 GRIN2BQ13224 1484 aa12.79□□□□□ -0.36
NME9-209ENST00000488716 ZNF608Q9ULD9 1512 aaPredicted RBP12.78□□□□□ -0.36
NME9-209ENST00000488716 EIF4G3O43432 1585 aaKnown RBP12.78□□□□□ -0.36
NME9-209ENST00000488716 TTLL13PA6NNM8 815 aa12.78□□□□□ -0.36
NME9-209ENST00000488716 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.77□□□□□ -0.37
NME9-209ENST00000488716 NCKAP5LQ9HCH0 1330 aa12.77□□□□□ -0.37
NME9-209ENST00000488716 AQRO60306 1485 aaKnown RBP eCLIP12.76□□□□□ -0.37
NME9-209ENST00000488716 PBRM1Q86U86 1689 aa12.76□□□□□ -0.37
NME9-209ENST00000488716 HAX1O00165 279 aa12.75□□□□□ -0.37
NME9-209ENST00000488716 LMOD2Q6P5Q4 547 aa12.75□□□□□ -0.37
NME9-209ENST00000488716 BMP2KQ9NSY1 1161 aaPredicted RBP12.75□□□□□ -0.37
NME9-209ENST00000488716 ADAMTS12P58397 1594 aa12.74□□□□□ -0.37
NME9-209ENST00000488716 FHAD1B1AJZ9 1412 aa12.74□□□□□ -0.37
NME9-209ENST00000488716 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.73□□□□□ -0.37
NME9-209ENST00000488716 DDX27Q96GQ7 796 aaKnown RBP12.73□□□□□ -0.37
NME9-209ENST00000488716 MAGI1Q96QZ7 1491 aaPredicted RBP12.72□□□□□ -0.37
NME9-209ENST00000488716 CRISPLD2Q9H0B8 497 aa12.72□□□□□ -0.37
NME9-209ENST00000488716 TRIM35Q9UPQ4 493 aa12.72□□□□□ -0.37
NME9-209ENST00000488716 CEP162Q5TB80 1403 aa12.71□□□□□ -0.37
NME9-209ENST00000488716 GALR2O43603 387 aaPredicted RBP12.71□□□□□ -0.37
NME9-209ENST00000488716 CLCN6P51797 869 aa12.71□□□□□ -0.37
NME9-209ENST00000488716 MFSD10Q14728 455 aa12.71□□□□□ -0.37
NME9-209ENST00000488716 UBTFP17480 764 aaKnown RBP12.69□□□□□ -0.38
NME9-209ENST00000488716 SNAPC4Q5SXM2 1469 aa12.68□□□□□ -0.38
NME9-209ENST00000488716 SEMA3EO15041 775 aa12.66□□□□□ -0.38
NME9-209ENST00000488716 SYNJ2O15056 1496 aa12.65□□□□□ -0.38
NME9-209ENST00000488716 ILDR1Q86SU0 546 aaPredicted RBP12.65□□□□□ -0.38
NME9-209ENST00000488716 CLIP1P30622 1438 aa12.63□□□□□ -0.39
NME9-209ENST00000488716 TESPA1A2RU30 521 aaPredicted RBP12.63□□□□□ -0.39
NME9-209ENST00000488716 SMYD5Q6GMV2 418 aa12.63□□□□□ -0.39
NME9-209ENST00000488716 GRIN2AQ12879 1464 aa12.63□□□□□ -0.39
NME9-209ENST00000488716 CTTNBP2Q8WZ74 1663 aa12.61□□□□□ -0.39
NME9-209ENST00000488716 PPP1R15BQ5SWA1 713 aa12.6□□□□□ -0.39
NME9-209ENST00000488716 DPY19L2Q6NUT2 758 aa12.6□□□□□ -0.39
NME9-209ENST00000488716 GPHNQ9NQX3 736 aaPredicted RBP12.6□□□□□ -0.39
NME9-209ENST00000488716 G3V3G9 751 aa12.59□□□□□ -0.39
NME9-209ENST00000488716 ATN1P54259 1190 aaPredicted RBP12.59□□□□□ -0.39
NME9-209ENST00000488716 EVX2Q03828 476 aa12.59□□□□□ -0.39
NME9-209ENST00000488716 CAMK2BQ13554 666 aa12.59□□□□□ -0.39
NME9-209ENST00000488716 ARIH1Q9Y4X5 557 aaPredicted RBP12.59□□□□□ -0.39
NME9-209ENST00000488716 EFCAB5A4FU69 1503 aa12.58□□□□□ -0.4
NME9-209ENST00000488716 NUP160Q12769 1436 aa12.58□□□□□ -0.4
NME9-209ENST00000488716 MICALL2Q8IY33 904 aa12.57□□□□□ -0.4
NME9-209ENST00000488716 TMC2Q8TDI7 906 aa12.57□□□□□ -0.4
NME9-209ENST00000488716 ARHGAP35Q9NRY4 1499 aa12.57□□□□□ -0.4
NME9-209ENST00000488716 KIAA0586Q9BVV6 1533 aa12.57□□□□□ -0.4
NME9-209ENST00000488716 IQGAP2Q13576 1575 aa12.56□□□□□ -0.4
NME9-209ENST00000488716 ARAP1Q96P48 1450 aa12.55□□□□□ -0.4
NME9-209ENST00000488716 ATMINO43313 823 aaPredicted RBP12.55□□□□□ -0.4
NME9-209ENST00000488716 OCEL1Q9H607 264 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms