RNA–Protein interactions for RNA: ENST00000487138.5

PROM2-209, Transcript of prominin 2, humanhuman

TSL 2

Gene PROM2, Length 4,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM2-209ENST00000487138 HMGXB3Q12766 1538 aa16.27■□□□□ 0.19
PROM2-209ENST00000487138 MRC2Q9UBG0 1479 aa16.26■□□□□ 0.19
PROM2-209ENST00000487138 CDCA8Q53HL2 280 aa16.26■□□□□ 0.19
PROM2-209ENST00000487138 CFTRP13569 1480 aa16.24■□□□□ 0.19
PROM2-209ENST00000487138 SENP3Q9H4L4 574 aaPredicted RBP16.23■□□□□ 0.19
PROM2-209ENST00000487138 POGKQ9P215 609 aa16.22■□□□□ 0.19
PROM2-209ENST00000487138 VPS8Q8N3P4 1428 aa16.22■□□□□ 0.19
PROM2-209ENST00000487138 GOLGA6L22H0YM25 854 aa16.21■□□□□ 0.19
PROM2-209ENST00000487138 FAM43AQ8N2R8 423 aa16.21■□□□□ 0.18
PROM2-209ENST00000487138 SPAG9O60271 1321 aaKnown RBP16.21■□□□□ 0.18
PROM2-209ENST00000487138 GRIN2BQ13224 1484 aa16.2■□□□□ 0.18
PROM2-209ENST00000487138 IFT140Q96RY7 1462 aa16.19■□□□□ 0.18
PROM2-209ENST00000487138 AQRO60306 1485 aaKnown RBP eCLIP16.18■□□□□ 0.18
PROM2-209ENST00000487138 RAD54L2Q9Y4B4 1467 aa16.18■□□□□ 0.18
PROM2-209ENST00000487138 MSNP26038 577 aaKnown RBP16.18■□□□□ 0.18
PROM2-209ENST00000487138 ARHGAP35Q9NRY4 1499 aa16.18■□□□□ 0.18
PROM2-209ENST00000487138 CCDC18Q5T9S5 1454 aa16.17■□□□□ 0.18
PROM2-209ENST00000487138 GOLGA6L3A6NEY3 463 aa16.17■□□□□ 0.18
PROM2-209ENST00000487138 BRPF3Q9ULD4 1205 aa16.17■□□□□ 0.18
PROM2-209ENST00000487138 PAK3O75914 559 aaPredicted RBP16.17■□□□□ 0.18
PROM2-209ENST00000487138 FAM69CQ0P6D2 419 aa16.17■□□□□ 0.18
PROM2-209ENST00000487138 NESP48681 1621 aa16.16■□□□□ 0.18
PROM2-209ENST00000487138 IGF1RP08069 1367 aa16.16■□□□□ 0.18
PROM2-209ENST00000487138 FHOD3Q2V2M9 1422 aa16.15■□□□□ 0.18
PROM2-209ENST00000487138 KIF3BO15066 747 aa16.15■□□□□ 0.18
PROM2-209ENST00000487138 ANKRD30AQ9BXX3 1397 aa16.15■□□□□ 0.18
PROM2-209ENST00000487138 SIN3AQ96ST3 1273 aa16.14■□□□□ 0.17
PROM2-209ENST00000487138 A0A0U1RQG5 324 aaPredicted RBP16.13■□□□□ 0.17
PROM2-209ENST00000487138 A0A0G2JS52 829 aa16.13■□□□□ 0.17
PROM2-209ENST00000487138 ZBTB7CA1YPR0 619 aa16.12■□□□□ 0.17
PROM2-209ENST00000487138 DNTTIP2Q5QJE6 756 aaKnown RBP16.12■□□□□ 0.17
PROM2-209ENST00000487138 RRP9O43818 475 aaKnown RBP16.12■□□□□ 0.17
PROM2-209ENST00000487138 PDE4AP27815 886 aa16.11■□□□□ 0.17
PROM2-209ENST00000487138 DHX57Q6P158 1386 aaKnown RBP16.11■□□□□ 0.17
PROM2-209ENST00000487138 LMOD2Q6P5Q4 547 aa16.11■□□□□ 0.17
PROM2-209ENST00000487138 PLEKHG5O94827 1062 aa16.11■□□□□ 0.17
PROM2-209ENST00000487138 AEBP2Q6ZN18 517 aaPredicted RBP16.11■□□□□ 0.17
PROM2-209ENST00000487138 EID1Q9Y6B2 187 aa16.1■□□□□ 0.17
PROM2-209ENST00000487138 BICRAQ9NZM4 1560 aa16.1■□□□□ 0.17
PROM2-209ENST00000487138 NUDCQ9Y266 331 aa16.1■□□□□ 0.17
PROM2-209ENST00000487138 WASHC2CQ9Y4E1 1318 aa16.1■□□□□ 0.17
PROM2-209ENST00000487138 MS4A1P11836 297 aa16.09■□□□□ 0.17
PROM2-209ENST00000487138 CARD11Q9BXL7 1154 aa16.09■□□□□ 0.17
PROM2-209ENST00000487138 MYH16Q9H6N6 1097 aa16.09■□□□□ 0.17
PROM2-209ENST00000487138 WDR43Q15061 677 aaKnown RBP eCLIP16.09■□□□□ 0.17
PROM2-209ENST00000487138 HNRNPMP52272 730 aaKnown RBP eCLIP16.08■□□□□ 0.16
PROM2-209ENST00000487138 PTMAP06454 111 aaKnown RBP16.08■□□□□ 0.16
PROM2-209ENST00000487138 RGS3P49796 1198 aa16.07■□□□□ 0.16
PROM2-209ENST00000487138 NFKBIBQ15653 356 aa16.06■□□□□ 0.16
PROM2-209ENST00000487138 FRAT1Q92837 279 aaPredicted RBP16.05■□□□□ 0.16
PROM2-209ENST00000487138 CFAP53Q96M91 514 aa16.04■□□□□ 0.16
PROM2-209ENST00000487138 LAMC3Q9Y6N6 1575 aa16.04■□□□□ 0.16
PROM2-209ENST00000487138 ZBED9Q6R2W3 1325 aa16.03■□□□□ 0.16
PROM2-209ENST00000487138 ZMYND15Q9H091 742 aa16.03■□□□□ 0.16
PROM2-209ENST00000487138 TOPBP1Q92547 1522 aa16.03■□□□□ 0.16
PROM2-209ENST00000487138 PKD2Q13563 968 aa16.03■□□□□ 0.16
PROM2-209ENST00000487138 NUP155O75694 1391 aa16.03■□□□□ 0.16
PROM2-209ENST00000487138 KANK4Q5T7N3 995 aaPredicted RBP16.02■□□□□ 0.16
PROM2-209ENST00000487138 MAP7D2Q96T17 732 aa16.02■□□□□ 0.16
PROM2-209ENST00000487138 PTMSP20962 102 aa16.01■□□□□ 0.15
PROM2-209ENST00000487138 DCAF11Q8TEB1 546 aa16.01■□□□□ 0.15
PROM2-209ENST00000487138 KNSTRNQ9Y448 316 aa16.01■□□□□ 0.15
PROM2-209ENST00000487138 GZF1Q9H116 711 aaPredicted RBP15.99■□□□□ 0.15
PROM2-209ENST00000487138 PRG4Q92954 1404 aaPredicted RBP15.98■□□□□ 0.15
PROM2-209ENST00000487138 TPM2P07951 284 aa15.98■□□□□ 0.15
PROM2-209ENST00000487138 SLKQ9H2G2 1235 aaPredicted RBP15.98■□□□□ 0.15
PROM2-209ENST00000487138 RUSC2Q8N2Y8 1516 aa15.98■□□□□ 0.15
PROM2-209ENST00000487138 RCAN3Q9UKA8 241 aa15.98■□□□□ 0.15
PROM2-209ENST00000487138 SETD5Q9C0A6 1442 aa15.97■□□□□ 0.15
PROM2-209ENST00000487138 POLA1P09884 1462 aaPredicted RBP15.95■□□□□ 0.14
PROM2-209ENST00000487138 C11orf95C9JLR9 678 aaPredicted RBP15.95■□□□□ 0.14
PROM2-209ENST00000487138 SRPK2P78362 688 aaKnown RBP15.94■□□□□ 0.14
PROM2-209ENST00000487138 MTERF4Q7Z6M4 381 aaKnown RBP15.94■□□□□ 0.14
PROM2-209ENST00000487138 CHAF1AQ13111 956 aaPredicted RBP15.94■□□□□ 0.14
PROM2-209ENST00000487138 TMF1P82094 1093 aa15.93■□□□□ 0.14
PROM2-209ENST00000487138 HSCBQ8IWL3 235 aa15.93■□□□□ 0.14
PROM2-209ENST00000487138 GBP4Q96PP9 640 aa15.93■□□□□ 0.14
PROM2-209ENST00000487138 SENP3-EIF4A1A0A087X0R7 540 aa15.93■□□□□ 0.14
PROM2-209ENST00000487138 ARID3AQ99856 593 aa15.93■□□□□ 0.14
PROM2-209ENST00000487138 RAB3GAP2Q9H2M9 1393 aa15.93■□□□□ 0.14
PROM2-209ENST00000487138 SLC4A3P48751 1232 aa15.92■□□□□ 0.14
PROM2-209ENST00000487138 AMER1Q5JTC6 1135 aaPredicted RBP15.92■□□□□ 0.14
PROM2-209ENST00000487138 DNMBPQ6XZF7 1577 aa15.91■□□□□ 0.14
PROM2-209ENST00000487138 HSPA5P11021 654 aaKnown RBP15.91■□□□□ 0.14
PROM2-209ENST00000487138 FAM161AQ3B820 660 aa15.9■□□□□ 0.14
PROM2-209ENST00000487138 STK26Q9P289 416 aa15.9■□□□□ 0.14
PROM2-209ENST00000487138 SYNJ2O15056 1496 aa15.89■□□□□ 0.13
PROM2-209ENST00000487138 SNAPC4Q5SXM2 1469 aa15.89■□□□□ 0.13
PROM2-209ENST00000487138 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.89■□□□□ 0.13
PROM2-209ENST00000487138 MPHOSPH9Q99550 1183 aa15.89■□□□□ 0.13
PROM2-209ENST00000487138 HSP90AB1P08238 724 aaKnown RBP15.88■□□□□ 0.13
PROM2-209ENST00000487138 DDX11L8A8MPP1 907 aa15.87■□□□□ 0.13
PROM2-209ENST00000487138 FAM13BQ9NYF5 915 aa15.87■□□□□ 0.13
PROM2-209ENST00000487138 PDE3BQ13370 1112 aa15.86■□□□□ 0.13
PROM2-209ENST00000487138 SAFB2Q14151 953 aaKnown RBP eCLIP15.85■□□□□ 0.13
PROM2-209ENST00000487138 HDGFL2Q7Z4V5 671 aaPredicted RBP15.85■□□□□ 0.13
PROM2-209ENST00000487138 MRE11P49959 708 aa15.84■□□□□ 0.13
PROM2-209ENST00000487138 KIAA2012Q0VF49 1180 aa15.83■□□□□ 0.12
PROM2-209ENST00000487138 VGFO15240 615 aaPredicted RBP15.82■□□□□ 0.12
PROM2-209ENST00000487138 RRP1P56182 461 aaKnown RBP15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms