RNA–Protein interactions for RNA: ENST00000487138.5

PROM2-209, Transcript of prominin 2, humanhuman

TSL 2

Gene PROM2, Length 4,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM2-209ENST00000487138 NISCHQ9Y2I1 1504 aa22■■□□□ 1.11
PROM2-209ENST00000487138 DCAF8L2P0C7V8 631 aa21.91■■□□□ 1.1
PROM2-209ENST00000487138 PELP1Q8IZL8 1130 aaKnown RBP21.06■□□□□ 0.96
PROM2-209ENST00000487138 MYT1Q01538 1121 aa20.8■□□□□ 0.92
PROM2-209ENST00000487138 SUPT5HO00267 1087 aaKnown RBP20.11■□□□□ 0.81
PROM2-209ENST00000487138 SHROOM4Q9ULL8 1493 aa20.05■□□□□ 0.8
PROM2-209ENST00000487138 HRCP23327 699 aa19.91■□□□□ 0.78
PROM2-209ENST00000487138 PCGF6Q9BYE7 350 aa19.82■□□□□ 0.76
PROM2-209ENST00000487138 CENPBP07199 599 aaPredicted RBP19.66■□□□□ 0.74
PROM2-209ENST00000487138 ZEB1P37275 1124 aaPredicted RBP19.66■□□□□ 0.74
PROM2-209ENST00000487138 FAM9AQ8IZU1 332 aaPredicted RBP19.41■□□□□ 0.7
PROM2-209ENST00000487138 TTBK1Q5TCY1 1321 aaPredicted RBP19.29■□□□□ 0.68
PROM2-209ENST00000487138 ABCC9O60706 1549 aa19.29■□□□□ 0.68
PROM2-209ENST00000487138 PPARGC1BQ86YN6 1023 aaKnown RBP19.21■□□□□ 0.67
PROM2-209ENST00000487138 APLP2Q06481 763 aa19.07■□□□□ 0.64
PROM2-209ENST00000487138 EHMT2Q96KQ7 1210 aa19.04■□□□□ 0.64
PROM2-209ENST00000487138 TRIM26Q12899 539 aaPredicted RBP19.02■□□□□ 0.64
PROM2-209ENST00000487138 ERICH6Q7L0X2 663 aa18.94■□□□□ 0.62
PROM2-209ENST00000487138 PABPN1Q86U42 306 aaKnown RBP eCLIP18.88■□□□□ 0.61
PROM2-209ENST00000487138 TRIM41Q8WV44 630 aa18.85■□□□□ 0.61
PROM2-209ENST00000487138 CCER1Q8TC90 406 aaPredicted RBP18.84■□□□□ 0.61
PROM2-209ENST00000487138 GTF3C3Q9Y5Q9 886 aa18.78■□□□□ 0.6
PROM2-209ENST00000487138 YTHDC1Q96MU7 727 aaKnown RBP18.75■□□□□ 0.59
PROM2-209ENST00000487138 ACIN1Q9UKV3 1341 aaKnown RBP18.75■□□□□ 0.59
PROM2-209ENST00000487138 SCAF1Q9H7N4 1312 aaKnown RBP18.7■□□□□ 0.58
PROM2-209ENST00000487138 RANGAP1P46060 587 aaPredicted RBP18.59■□□□□ 0.57
PROM2-209ENST00000487138 UBTFP17480 764 aaKnown RBP18.59■□□□□ 0.57
PROM2-209ENST00000487138 ATP1B4Q9UN42 357 aaPredicted RBP18.58■□□□□ 0.57
PROM2-209ENST00000487138 DIEXFQ68CQ4 756 aaKnown RBP18.55■□□□□ 0.56
PROM2-209ENST00000487138 CHIC1Q5VXU3 224 aa18.54■□□□□ 0.56
PROM2-209ENST00000487138 NEFLP07196 543 aa18.52■□□□□ 0.56
PROM2-209ENST00000487138 CCDC180Q9P1Z9 1646 aa18.43■□□□□ 0.54
PROM2-209ENST00000487138 NEUROD1Q13562 356 aa18.32■□□□□ 0.52
PROM2-209ENST00000487138 LOC105371045A0A1W2PR82 267 aa18.3■□□□□ 0.52
PROM2-209ENST00000487138 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.25■□□□□ 0.51
PROM2-209ENST00000487138 HNRNPUL2Q1KMD3 747 aaKnown RBP18.25■□□□□ 0.51
PROM2-209ENST00000487138 CLSPNQ9HAW4 1339 aa18.2■□□□□ 0.5
PROM2-209ENST00000487138 RB1CC1Q8TDY2 1594 aa18.18■□□□□ 0.5
PROM2-209ENST00000487138 DCAF1Q9Y4B6 1507 aa18.18■□□□□ 0.5
PROM2-209ENST00000487138 SCRIBQ14160 1630 aa18.17■□□□□ 0.5
PROM2-209ENST00000487138 BCL11AQ9H165 835 aa18.16■□□□□ 0.5
PROM2-209ENST00000487138 ZCCHC6Q5VYS8 1495 aaKnown RBP18.14■□□□□ 0.49
PROM2-209ENST00000487138 MYT1LQ9UL68 1186 aa18.13■□□□□ 0.49
PROM2-209ENST00000487138 ANP32EQ9BTT0 268 aa18.09■□□□□ 0.49
PROM2-209ENST00000487138 FBLN2P98095 1184 aa18.03■□□□□ 0.48
PROM2-209ENST00000487138 RTL5Q5HYW3 569 aaPredicted RBP18.03■□□□□ 0.48
PROM2-209ENST00000487138 NACADO15069 1562 aa18.01■□□□□ 0.47
PROM2-209ENST00000487138 ZNF316A6NFI3 1004 aaPredicted RBP18.01■□□□□ 0.47
PROM2-209ENST00000487138 BCANQ96GW7 911 aa17.82■□□□□ 0.44
PROM2-209ENST00000487138 CDK11AQ9UQ88 783 aaPredicted RBP17.78■□□□□ 0.44
PROM2-209ENST00000487138 ITGAEP38570 1179 aa17.67■□□□□ 0.42
PROM2-209ENST00000487138 DAXXQ9UER7 740 aaPredicted RBP17.66■□□□□ 0.42
PROM2-209ENST00000487138 NPM1P06748 294 aaKnown RBP eCLIP17.64■□□□□ 0.41
PROM2-209ENST00000487138 MYO15BQ96JP2 1530 aa17.62■□□□□ 0.41
PROM2-209ENST00000487138 GLIPR1L2Q4G1C9 344 aa17.6■□□□□ 0.41
PROM2-209ENST00000487138 EIF5BO60841 1220 aaKnown RBP17.59■□□□□ 0.41
PROM2-209ENST00000487138 CSRNP3Q8WYN3 585 aa17.58■□□□□ 0.41
PROM2-209ENST00000487138 FKBP8Q14318 412 aa17.55■□□□□ 0.4
PROM2-209ENST00000487138 MIER1Q8N108 512 aa17.53■□□□□ 0.4
PROM2-209ENST00000487138 BAZ1BQ9UIG0 1483 aaKnown RBP17.51■□□□□ 0.39
PROM2-209ENST00000487138 CHMP7Q8WUX9 453 aaPredicted RBP17.5■□□□□ 0.39
PROM2-209ENST00000487138 FAM50AQ14320 339 aaKnown RBP17.45■□□□□ 0.38
PROM2-209ENST00000487138 ERCC6Q03468 1493 aa17.45■□□□□ 0.38
PROM2-209ENST00000487138 ANP32AP39687 249 aaKnown RBP17.45■□□□□ 0.38
PROM2-209ENST00000487138 SUPT16HQ9Y5B9 1047 aaKnown RBP17.44■□□□□ 0.38
PROM2-209ENST00000487138 SLC24A1O60721 1099 aa17.43■□□□□ 0.38
PROM2-209ENST00000487138 P3H3Q8IVL6 736 aa17.42■□□□□ 0.38
PROM2-209ENST00000487138 PRKCSHP14314 528 aaPredicted RBP17.39■□□□□ 0.37
PROM2-209ENST00000487138 BAZ1AQ9NRL2 1556 aaPredicted RBP17.37■□□□□ 0.37
PROM2-209ENST00000487138 ANP32CO43423 234 aa17.35■□□□□ 0.37
PROM2-209ENST00000487138 ESF1Q9H501 851 aaKnown RBP17.35■□□□□ 0.37
PROM2-209ENST00000487138 RSF1Q96T23 1441 aaPredicted RBP17.34■□□□□ 0.37
PROM2-209ENST00000487138 TSHZ2Q9NRE2 1034 aa17.33■□□□□ 0.37
PROM2-209ENST00000487138 ARID3CA6NKF2 412 aa17.33■□□□□ 0.36
PROM2-209ENST00000487138 NBR1Q14596 966 aa17.32■□□□□ 0.36
PROM2-209ENST00000487138 TRIM52Q96A61 297 aa17.32■□□□□ 0.36
PROM2-209ENST00000487138 DEKP35659 375 aaKnown RBP17.25■□□□□ 0.35
PROM2-209ENST00000487138 ZNF777Q9ULD5 760 aaPredicted RBP17.23■□□□□ 0.35
PROM2-209ENST00000487138 ZBTB47Q9UFB7 747 aaPredicted RBP17.23■□□□□ 0.35
PROM2-209ENST00000487138 RBM19Q9Y4C8 960 aaKnown RBP17.22■□□□□ 0.35
PROM2-209ENST00000487138 POLR3GLQ9BT43 218 aa17.22■□□□□ 0.35
PROM2-209ENST00000487138 ERICH6BQ5W0A0 696 aa17.21■□□□□ 0.35
PROM2-209ENST00000487138 PDS5BQ9NTI5 1447 aa17.18■□□□□ 0.34
PROM2-209ENST00000487138 SMARCA2P51531 1590 aa17.16■□□□□ 0.34
PROM2-209ENST00000487138 CECR2Q9BXF3 1484 aa17.15■□□□□ 0.34
PROM2-209ENST00000487138 SLC4A1APQ9BWU0 796 aaKnown RBP17.14■□□□□ 0.33
PROM2-209ENST00000487138 WRNQ14191 1432 aaPredicted RBP eCLIP17.13■□□□□ 0.33
PROM2-209ENST00000487138 KIF27Q86VH2 1401 aa17.08■□□□□ 0.32
PROM2-209ENST00000487138 EEA1Q15075 1411 aa17.07■□□□□ 0.32
PROM2-209ENST00000487138 NOP58Q9Y2X3 529 aaKnown RBP17.05■□□□□ 0.32
PROM2-209ENST00000487138 RTN4Q9NQC3 1192 aaKnown RBP17.05■□□□□ 0.32
PROM2-209ENST00000487138 PLEKHD1A6NEE1 506 aa17.04■□□□□ 0.32
PROM2-209ENST00000487138 NPM2Q86SE8 214 aaKnown RBP17.03■□□□□ 0.32
PROM2-209ENST00000487138 TSPY4P0CV99 314 aa17.03■□□□□ 0.32
PROM2-209ENST00000487138 TSPY10P0CW01 314 aa17.03■□□□□ 0.32
PROM2-209ENST00000487138 STAG3Q9UJ98 1225 aa17.02■□□□□ 0.32
PROM2-209ENST00000487138 HNRNPUQ00839 825 aaKnown RBP eCLIP17■□□□□ 0.31
PROM2-209ENST00000487138 MTUS2Q5JR59 1369 aa16.97■□□□□ 0.31
PROM2-209ENST00000487138 KCNH8Q96L42 1107 aa16.96■□□□□ 0.31
PROM2-209ENST00000487138 NEFMP07197 916 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms