RNA–Protein interactions for RNA: ENST00000486596.5

NECTIN3-208, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 5

Gene NECTIN3, Length 732 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-208ENST00000486596 SEC24BO95487 1268 aa11.13□□□□□ -0.63
NECTIN3-208ENST00000486596 SPOCK2Q92563 424 aa11.13□□□□□ -0.63
NECTIN3-208ENST00000486596 PCDHB8Q9UN66 801 aa11.13□□□□□ -0.63
NECTIN3-208ENST00000486596 TDRD9Q8NDG6 1382 aaKnown RBP11.12□□□□□ -0.63
NECTIN3-208ENST00000486596 SCUBE2Q9NQ36 999 aa11.11□□□□□ -0.63
NECTIN3-208ENST00000486596 SNAPC4Q5SXM2 1469 aa11.11□□□□□ -0.63
NECTIN3-208ENST00000486596 SOGA1O94964 1423 aa11.1□□□□□ -0.63
NECTIN3-208ENST00000486596 ZNF467Q7Z7K2 595 aaPredicted RBP11.1□□□□□ -0.63
NECTIN3-208ENST00000486596 CLASP1Q7Z460 1538 aa11.09□□□□□ -0.63
NECTIN3-208ENST00000486596 FGD5Q6ZNL6 1462 aa11.09□□□□□ -0.63
NECTIN3-208ENST00000486596 IRX5P78411 483 aaPredicted RBP11.08□□□□□ -0.64
NECTIN3-208ENST00000486596 WDR97A6NE52 1622 aa11.06□□□□□ -0.64
NECTIN3-208ENST00000486596 CUX1P39880 1505 aa11.06□□□□□ -0.64
NECTIN3-208ENST00000486596 CIZ1Q9ULV3 898 aaPredicted RBP11.06□□□□□ -0.64
NECTIN3-208ENST00000486596 MAGI1Q96QZ7 1491 aaPredicted RBP11.05□□□□□ -0.64
NECTIN3-208ENST00000486596 SYNJ1O43426 1573 aa11.04□□□□□ -0.64
NECTIN3-208ENST00000486596 GRIN2BQ13224 1484 aa11.03□□□□□ -0.64
NECTIN3-208ENST00000486596 SYNJ2O15056 1496 aa11.02□□□□□ -0.65
NECTIN3-208ENST00000486596 PLCG2P16885 1265 aa11.02□□□□□ -0.65
NECTIN3-208ENST00000486596 CHMP7Q8WUX9 453 aaPredicted RBP11.02□□□□□ -0.65
NECTIN3-208ENST00000486596 OCEL1Q9H607 264 aa11.01□□□□□ -0.65
NECTIN3-208ENST00000486596 PBRM1Q86U86 1689 aa10.98□□□□□ -0.65
NECTIN3-208ENST00000486596 PSEN1P49768 467 aa10.98□□□□□ -0.65
NECTIN3-208ENST00000486596 GAPVD1Q14C86 1478 aa10.97□□□□□ -0.65
NECTIN3-208ENST00000486596 ABCA5Q8WWZ7 1642 aa10.97□□□□□ -0.65
NECTIN3-208ENST00000486596 PDAP1Q13442 181 aaKnown RBP10.95□□□□□ -0.66
NECTIN3-208ENST00000486596 LCE2DQ5TA82 110 aaPredicted RBP10.95□□□□□ -0.66
NECTIN3-208ENST00000486596 ABCA10Q8WWZ4 1543 aa10.94□□□□□ -0.66
NECTIN3-208ENST00000486596 POTEMA6NI47 508 aa10.94□□□□□ -0.66
NECTIN3-208ENST00000486596 ERCC6L2Q5T890 1561 aa10.94□□□□□ -0.66
NECTIN3-208ENST00000486596 POTEGQ6S5H5 508 aa10.92□□□□□ -0.66
NECTIN3-208ENST00000486596 PDCD7Q8N8D1 485 aaKnown RBP10.92□□□□□ -0.66
NECTIN3-208ENST00000486596 MKRN3Q13064 507 aaKnown RBP10.91□□□□□ -0.66
NECTIN3-208ENST00000486596 ILDR1Q86SU0 546 aaPredicted RBP10.91□□□□□ -0.66
NECTIN3-208ENST00000486596 GRIN2AQ12879 1464 aa10.9□□□□□ -0.66
NECTIN3-208ENST00000486596 GOLGA2Q08379 1002 aa10.9□□□□□ -0.66
NECTIN3-208ENST00000486596 ADAMTS12P58397 1594 aa10.9□□□□□ -0.67
NECTIN3-208ENST00000486596 CEP170Q5SW79 1584 aa10.9□□□□□ -0.67
NECTIN3-208ENST00000486596 SLAIN1Q8ND83 568 aa10.89□□□□□ -0.67
NECTIN3-208ENST00000486596 FAM163AQ96GL9 167 aaPredicted RBP10.89□□□□□ -0.67
NECTIN3-208ENST00000486596 NUP160Q12769 1436 aa10.88□□□□□ -0.67
NECTIN3-208ENST00000486596 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.85□□□□□ -0.673e-7■■□□□ 11.7
NECTIN3-208ENST00000486596 WRNQ14191 1432 aaPredicted RBP eCLIP10.84□□□□□ -0.67
NECTIN3-208ENST00000486596 SHROOM2Q13796 1616 aa10.84□□□□□ -0.67
NECTIN3-208ENST00000486596 TOP2BQ02880 1626 aa10.84□□□□□ -0.67
NECTIN3-208ENST00000486596 BIVM-ERCC5R4GMW8 1640 aa10.84□□□□□ -0.67
NECTIN3-208ENST00000486596 L3MBTL3Q96JM7 780 aaPredicted RBP10.83□□□□□ -0.68
NECTIN3-208ENST00000486596 CABP2Q9NPB3 220 aa10.83□□□□□ -0.68
NECTIN3-208ENST00000486596 PCDH10Q9P2E7 1040 aa10.83□□□□□ -0.68
NECTIN3-208ENST00000486596 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.82□□□□□ -0.68
NECTIN3-208ENST00000486596 FHAD1B1AJZ9 1412 aa10.82□□□□□ -0.68
NECTIN3-208ENST00000486596 SUPT5HO00267 1087 aaKnown RBP10.81□□□□□ -0.68
NECTIN3-208ENST00000486596 ERICH3Q5RHP9 1530 aa10.79□□□□□ -0.68
NECTIN3-208ENST00000486596 RNF25Q96BH1 459 aaPredicted RBP10.79□□□□□ -0.68
NECTIN3-208ENST00000486596 RIOK3O14730 519 aaKnown RBP10.77□□□□□ -0.69
NECTIN3-208ENST00000486596 KIF13AQ9H1H9 1805 aa10.77□□□□□ -0.69
NECTIN3-208ENST00000486596 PRG4Q92954 1404 aaPredicted RBP10.76□□□□□ -0.69
NECTIN3-208ENST00000486596 ST18O60284 1047 aa10.76□□□□□ -0.69
NECTIN3-208ENST00000486596 RUSC2Q8N2Y8 1516 aa10.75□□□□□ -0.69
NECTIN3-208ENST00000486596 ECM2O94769 699 aaPredicted RBP10.75□□□□□ -0.69
NECTIN3-208ENST00000486596 DPY19L2Q6NUT2 758 aa10.75□□□□□ -0.69
NECTIN3-208ENST00000486596 C3orf67Q6ZVT6 689 aa10.75□□□□□ -0.69
NECTIN3-208ENST00000486596 SNPHO15079 494 aa10.73□□□□□ -0.69
NECTIN3-208ENST00000486596 EFCAB3Q8N7B9 438 aa10.73□□□□□ -0.69
NECTIN3-208ENST00000486596 VGFO15240 615 aaPredicted RBP10.72□□□□□ -0.69
NECTIN3-208ENST00000486596 JPH4Q96JJ6 628 aa10.72□□□□□ -0.69
NECTIN3-208ENST00000486596 PLSCR2Q9NRY7 297 aa10.72□□□□□ -0.69
NECTIN3-208ENST00000486596 ABCC10Q5T3U5 1492 aa10.7□□□□□ -0.7
NECTIN3-208ENST00000486596 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.7□□□□□ -0.7
NECTIN3-208ENST00000486596 ZFP91Q96JP5 570 aaPredicted RBP10.7□□□□□ -0.7
NECTIN3-208ENST00000486596 BOLA1Q9Y3E2 137 aa10.7□□□□□ -0.7
NECTIN3-208ENST00000486596 ADCY10Q96PN6 1610 aa10.69□□□□□ -0.7
NECTIN3-208ENST00000486596 DIP2BQ9P265 1576 aa10.69□□□□□ -0.7
NECTIN3-208ENST00000486596 MAPKBP1O60336 1514 aa10.69□□□□□ -0.7
NECTIN3-208ENST00000486596 TMEM121BQ9BXQ6 578 aaPredicted RBP10.69□□□□□ -0.7
NECTIN3-208ENST00000486596 SOX12O15370 315 aa10.67□□□□□ -0.7
NECTIN3-208ENST00000486596 FAM69CQ0P6D2 419 aa10.67□□□□□ -0.7
NECTIN3-208ENST00000486596 PKD2Q13563 968 aa10.67□□□□□ -0.7
NECTIN3-208ENST00000486596 G3V3G9 751 aa10.64□□□□□ -0.71
NECTIN3-208ENST00000486596 TAOK2Q9UL54 1235 aa10.64□□□□□ -0.71
NECTIN3-208ENST00000486596 KIAA0586Q9BVV6 1533 aa10.63□□□□□ -0.71
NECTIN3-208ENST00000486596 KDM6BO15054 1643 aa10.62□□□□□ -0.71
NECTIN3-208ENST00000486596 CDAN1Q8IWY9 1227 aa10.62□□□□□ -0.71
NECTIN3-208ENST00000486596 IGF1RP08069 1367 aa10.62□□□□□ -0.71
NECTIN3-208ENST00000486596 CUL7Q14999 1698 aa10.6□□□□□ -0.71
NECTIN3-208ENST00000486596 RGL2O15211 777 aa10.6□□□□□ -0.71
NECTIN3-208ENST00000486596 MS4A4AQ96JQ5 239 aa10.6□□□□□ -0.71
NECTIN3-208ENST00000486596 KIF27Q86VH2 1401 aa10.59□□□□□ -0.71
NECTIN3-208ENST00000486596 KDM4FA0A1W2PPD8 638 aa10.59□□□□□ -0.71
NECTIN3-208ENST00000486596 PHF8Q9UPP1 1060 aa10.58□□□□□ -0.72
NECTIN3-208ENST00000486596 MICALL2Q8IY33 904 aa10.57□□□□□ -0.72
NECTIN3-208ENST00000486596 BCL11BQ9C0K0 894 aaPredicted RBP10.57□□□□□ -0.72
NECTIN3-208ENST00000486596 TSPOAP1O95153 1857 aa10.57□□□□□ -0.72
NECTIN3-208ENST00000486596 PTPRGP23470 1445 aa10.56□□□□□ -0.72
NECTIN3-208ENST00000486596 TTBK1Q5TCY1 1321 aaPredicted RBP10.56□□□□□ -0.72
NECTIN3-208ENST00000486596 HOXB3P14651 431 aaPredicted RBP10.55□□□□□ -0.72
NECTIN3-208ENST00000486596 STK24Q9Y6E0 443 aa10.55□□□□□ -0.72
NECTIN3-208ENST00000486596 ABCC2Q92887 1545 aa10.54□□□□□ -0.72
NECTIN3-208ENST00000486596 STK25O00506 426 aa10.54□□□□□ -0.72
NECTIN3-208ENST00000486596 FBXO22Q8NEZ5 403 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 155.5 ms