RNA–Protein interactions for RNA: ENST00000485946.1

PCCA-209, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

TSL 2

Gene PCCA, Length 1,789 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-209ENST00000485946 PBRM1Q86U86 1689 aa9.06□□□□□ -0.96
PCCA-209ENST00000485946 FGD5Q6ZNL6 1462 aa9.06□□□□□ -0.96
PCCA-209ENST00000485946 RAD21O60216 631 aa9.05□□□□□ -0.96
PCCA-209ENST00000485946 NEUROD2Q15784 382 aa9.05□□□□□ -0.96
PCCA-209ENST00000485946 SOGA1O94964 1423 aa9.05□□□□□ -0.96
PCCA-209ENST00000485946 CHD1O14646 1710 aa9.05□□□□□ -0.96
PCCA-209ENST00000485946 SPDYE2BA6NHP3 402 aa9.04□□□□□ -0.96
PCCA-209ENST00000485946 SPDYE6P0CI01 402 aa9.04□□□□□ -0.96
PCCA-209ENST00000485946 SPDYE2Q495Y8 402 aa9.04□□□□□ -0.96
PCCA-209ENST00000485946 CDAN1Q8IWY9 1227 aa9.04□□□□□ -0.96
PCCA-209ENST00000485946 FAM9AQ8IZU1 332 aaPredicted RBP9.04□□□□□ -0.96
PCCA-209ENST00000485946 ECM2O94769 699 aaPredicted RBP9.04□□□□□ -0.96
PCCA-209ENST00000485946 MMRN1Q13201 1228 aa9.03□□□□□ -0.96
PCCA-209ENST00000485946 ZNF608Q9ULD9 1512 aaPredicted RBP9.03□□□□□ -0.96
PCCA-209ENST00000485946 MAGI1Q96QZ7 1491 aaPredicted RBP9.02□□□□□ -0.97
PCCA-209ENST00000485946 ABCA10Q8WWZ4 1543 aa9.02□□□□□ -0.97
PCCA-209ENST00000485946 ABCA5Q8WWZ7 1642 aa9.02□□□□□ -0.97
PCCA-209ENST00000485946 WRNQ14191 1432 aaPredicted RBP eCLIP9.01□□□□□ -0.97
PCCA-209ENST00000485946 GRIN2BQ13224 1484 aa9□□□□□ -0.97
PCCA-209ENST00000485946 POLR3GLQ9BT43 218 aa9□□□□□ -0.97
PCCA-209ENST00000485946 ZNF428Q96B54 188 aa8.99□□□□□ -0.97
PCCA-209ENST00000485946 MTMR7Q9Y216 660 aa8.99□□□□□ -0.97
PCCA-209ENST00000485946 ARID3CA6NKF2 412 aa8.99□□□□□ -0.97
PCCA-209ENST00000485946 RAD54L2Q9Y4B4 1467 aa8.98□□□□□ -0.97
PCCA-209ENST00000485946 SYNJ1O43426 1573 aa8.98□□□□□ -0.97
PCCA-209ENST00000485946 RGL2O15211 777 aa8.98□□□□□ -0.97
PCCA-209ENST00000485946 DCBLD2Q96PD2 775 aa8.98□□□□□ -0.97
PCCA-209ENST00000485946 AQRO60306 1485 aaKnown RBP eCLIP8.97□□□□□ -0.97
PCCA-209ENST00000485946 GAPVD1Q14C86 1478 aa8.97□□□□□ -0.97
PCCA-209ENST00000485946 NEFLP07196 543 aa8.96□□□□□ -0.97
PCCA-209ENST00000485946 MKRN4PQ13434 485 aaPredicted RBP8.96□□□□□ -0.97
PCCA-209ENST00000485946 LMOD2Q6P5Q4 547 aa8.96□□□□□ -0.97
PCCA-209ENST00000485946 ERICH3Q5RHP9 1530 aa8.96□□□□□ -0.98
PCCA-209ENST00000485946 SYNJ2O15056 1496 aa8.95□□□□□ -0.98
PCCA-209ENST00000485946 RBM25P49756 843 aaKnown RBP8.95□□□□□ -0.98
PCCA-209ENST00000485946 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.94□□□□□ -0.98
PCCA-209ENST00000485946 APBB1O00213 710 aa8.94□□□□□ -0.98
PCCA-209ENST00000485946 SNAPC4Q5SXM2 1469 aa8.93□□□□□ -0.98
PCCA-209ENST00000485946 ZNF692Q9BU19 519 aaPredicted RBP8.93□□□□□ -0.98
PCCA-209ENST00000485946 TDRD9Q8NDG6 1382 aaKnown RBP8.93□□□□□ -0.98
PCCA-209ENST00000485946 FOXD4L5Q5VV16 416 aaPredicted RBP8.92□□□□□ -0.98
PCCA-209ENST00000485946 FOXD4L4Q8WXT5 416 aaPredicted RBP8.92□□□□□ -0.98
PCCA-209ENST00000485946 ADAMTS12P58397 1594 aa8.92□□□□□ -0.98
PCCA-209ENST00000485946 CUL7Q14999 1698 aa8.92□□□□□ -0.98
PCCA-209ENST00000485946 RIMBP3CA6NJZ7 1639 aa8.92□□□□□ -0.98
PCCA-209ENST00000485946 RIMBP3BA6NNM3 1639 aa8.92□□□□□ -0.98
PCCA-209ENST00000485946 RIMBP3Q9UFD9 1639 aa8.92□□□□□ -0.98
PCCA-209ENST00000485946 TRIM41Q8WV44 630 aa8.91□□□□□ -0.98
PCCA-209ENST00000485946 SPDYE1Q8NFV5 336 aaPredicted RBP8.91□□□□□ -0.98
PCCA-209ENST00000485946 FAM163AQ96GL9 167 aaPredicted RBP8.91□□□□□ -0.98
PCCA-209ENST00000485946 BCCIPQ9P287 314 aaKnown RBP eCLIP8.91□□□□□ -0.98
PCCA-209ENST00000485946 CLASP1Q7Z460 1538 aa8.91□□□□□ -0.98
PCCA-209ENST00000485946 CHGAP10645 457 aaKnown RBP8.9□□□□□ -0.98
PCCA-209ENST00000485946 SSUH2Q9Y2M2 353 aa8.9□□□□□ -0.98
PCCA-209ENST00000485946 LCE2DQ5TA82 110 aaPredicted RBP8.89□□□□□ -0.99
PCCA-209ENST00000485946 CHMP7Q8WUX9 453 aaPredicted RBP8.89□□□□□ -0.99
PCCA-209ENST00000485946 CLEC11AQ9Y240 323 aa8.89□□□□□ -0.99
PCCA-209ENST00000485946 ARHGEF11O15085 1522 aa8.88□□□□□ -0.99
PCCA-209ENST00000485946 FHAD1B1AJZ9 1412 aa8.88□□□□□ -0.99
PCCA-209ENST00000485946 GRIN2AQ12879 1464 aa8.87□□□□□ -0.99
PCCA-209ENST00000485946 FAM177A1Q8N128 213 aaPredicted RBP8.86□□□□□ -0.99
PCCA-209ENST00000485946 TRAIPQ9BWF2 469 aa8.86□□□□□ -0.99
PCCA-209ENST00000485946 KIF27Q86VH2 1401 aa8.86□□□□□ -0.99
PCCA-209ENST00000485946 PRKAR2AP13861 404 aaKnown RBP8.85□□□□□ -0.99
PCCA-209ENST00000485946 TMCO4Q5TGY1 634 aa8.85□□□□□ -0.99
PCCA-209ENST00000485946 BCL11BQ9C0K0 894 aaPredicted RBP8.85□□□□□ -0.99
PCCA-209ENST00000485946 SHROOM2Q13796 1616 aa8.85□□□□□ -0.99
PCCA-209ENST00000485946 MFAP1P55081 439 aaKnown RBP8.84□□□□□ -0.99
PCCA-209ENST00000485946 PROM2Q8N271 834 aa8.84□□□□□ -0.99
PCCA-209ENST00000485946 SLC24A3Q9HC58 644 aa8.84□□□□□ -0.99
PCCA-209ENST00000485946 USP35Q9P2H5 1018 aa8.84□□□□□ -0.99
PCCA-209ENST00000485946 NUP160Q12769 1436 aa8.83□□□□□ -1
PCCA-209ENST00000485946 MAMSTRQ6ZN01 415 aa8.83□□□□□ -1
PCCA-209ENST00000485946 AEBP1Q8IUX7 1158 aa8.82□□□□□ -1
PCCA-209ENST00000485946 SPNS2Q8IVW8 549 aa8.82□□□□□ -1
PCCA-209ENST00000485946 E9PSI1 815 aa8.81□□□□□ -1
PCCA-209ENST00000485946 CEP170Q5SW79 1584 aa8.81□□□□□ -1
PCCA-209ENST00000485946 CCDC82Q8N4S0 544 aa8.8□□□□□ -1
PCCA-209ENST00000485946 ZC3H15Q8WU90 426 aaKnown RBP8.8□□□□□ -1
PCCA-209ENST00000485946 RUSC2Q8N2Y8 1516 aa8.79□□□□□ -1
PCCA-209ENST00000485946 PKNOX2Q96KN3 472 aa8.78□□□□□ -1
PCCA-209ENST00000485946 RSPH4AQ5TD94 716 aa8.77□□□□□ -1.01
PCCA-209ENST00000485946 TICAM2Q86XR7 235 aa8.77□□□□□ -1.01
PCCA-209ENST00000485946 CWC22Q9HCG8 908 aaKnown RBP8.77□□□□□ -1.01
PCCA-209ENST00000485946 ARAP1Q96P48 1450 aa8.77□□□□□ -1.01
PCCA-209ENST00000485946 CTTNBP2Q8WZ74 1663 aa8.76□□□□□ -1.01
PCCA-209ENST00000485946 SPOCK2Q92563 424 aa8.76□□□□□ -1.01
PCCA-209ENST00000485946 ZNF592Q92610 1267 aa8.76□□□□□ -1.01
PCCA-209ENST00000485946 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.76□□□□□ -1.01
PCCA-209ENST00000485946 IGF1RP08069 1367 aa8.76□□□□□ -1.01
PCCA-209ENST00000485946 SPDYE4A6NLX3 237 aa8.76□□□□□ -1.01
PCCA-209ENST00000485946 POTEB2H3BUK9 544 aa8.76□□□□□ -1.01
PCCA-209ENST00000485946 BRPF3Q9ULD4 1205 aa8.76□□□□□ -1.01
PCCA-209ENST00000485946 KIAA0586Q9BVV6 1533 aa8.76□□□□□ -1.01
PCCA-209ENST00000485946 FGD1P98174 961 aa8.75□□□□□ -1.01
PCCA-209ENST00000485946 ZFP91Q96JP5 570 aaPredicted RBP8.75□□□□□ -1.01
PCCA-209ENST00000485946 GZF1Q9H116 711 aaPredicted RBP8.75□□□□□ -1.01
PCCA-209ENST00000485946 PRR29P0C7W0 189 aa8.74□□□□□ -1.01
PCCA-209ENST00000485946 MKRN3Q13064 507 aaKnown RBP8.74□□□□□ -1.01
PCCA-209ENST00000485946 CERS3Q8IU89 383 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms