RNA–Protein interactions for RNA: ENST00000482871.5

MSL3-215, Transcript of MSL complex subunit 3, humanhuman

TSL 3

Gene MSL3, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-215ENST00000482871 CFTRP13569 1480 aa13.39□□□□□ -0.27
MSL3-215ENST00000482871 ERCC6Q03468 1493 aa13.39□□□□□ -0.27
MSL3-215ENST00000482871 MKRN3Q13064 507 aaKnown RBP13.38□□□□□ -0.27
MSL3-215ENST00000482871 PDS5BQ9NTI5 1447 aa13.38□□□□□ -0.27
MSL3-215ENST00000482871 PRDM2Q13029 1718 aa13.36□□□□□ -0.27
MSL3-215ENST00000482871 EFCAB3Q8N7B9 438 aa13.36□□□□□ -0.27
MSL3-215ENST00000482871 TIMELESSQ9UNS1 1208 aa13.36□□□□□ -0.27
MSL3-215ENST00000482871 KIF21AQ7Z4S6 1674 aa13.34□□□□□ -0.27
MSL3-215ENST00000482871 TULP1O00294 542 aaPredicted RBP13.31□□□□□ -0.28
MSL3-215ENST00000482871 SLC39A7Q92504 469 aa13.31□□□□□ -0.28
MSL3-215ENST00000482871 FANCD2Q9BXW9 1451 aa13.3□□□□□ -0.28
MSL3-215ENST00000482871 LHX8Q68G74 356 aa13.29□□□□□ -0.28
MSL3-215ENST00000482871 METRNQ9UJH8 293 aa13.29□□□□□ -0.28
MSL3-215ENST00000482871 SEC24BO95487 1268 aa13.27□□□□□ -0.29
MSL3-215ENST00000482871 C7P10643 843 aa13.27□□□□□ -0.29
MSL3-215ENST00000482871 IER5LQ5T953 404 aa13.27□□□□□ -0.29
MSL3-215ENST00000482871 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.27□□□□□ -0.292e-8■■■■■ 35.5
MSL3-215ENST00000482871 GTF3C3Q9Y5Q9 886 aa13.27□□□□□ -0.29
MSL3-215ENST00000482871 CEP164Q9UPV0 1460 aa13.27□□□□□ -0.29
MSL3-215ENST00000482871 SOX12O15370 315 aa13.25□□□□□ -0.29
MSL3-215ENST00000482871 PHF8Q9UPP1 1060 aa13.24□□□□□ -0.29
MSL3-215ENST00000482871 PLCG2P16885 1265 aa13.23□□□□□ -0.29
MSL3-215ENST00000482871 NKX1-1Q15270 411 aaPredicted RBP13.23□□□□□ -0.29
MSL3-215ENST00000482871 IRX5P78411 483 aaPredicted RBP13.21□□□□□ -0.29
MSL3-215ENST00000482871 ERICH6Q7L0X2 663 aa13.21□□□□□ -0.29
MSL3-215ENST00000482871 MFRPQ9BY79 579 aa13.21□□□□□ -0.29
MSL3-215ENST00000482871 MRC2Q9UBG0 1479 aa13.21□□□□□ -0.3
MSL3-215ENST00000482871 THOC2Q8NI27 1593 aaKnown RBP13.2□□□□□ -0.3
MSL3-215ENST00000482871 NLRP6P59044 892 aa13.2□□□□□ -0.3
MSL3-215ENST00000482871 OCEL1Q9H607 264 aa13.2□□□□□ -0.3
MSL3-215ENST00000482871 COLQQ9Y215 455 aaPredicted RBP13.2□□□□□ -0.3
MSL3-215ENST00000482871 ARXQ96QS3 562 aa13.16□□□□□ -0.3
MSL3-215ENST00000482871 WDR62O43379 1518 aa13.15□□□□□ -0.3
MSL3-215ENST00000482871 POTEFA5A3E0 1075 aa13.15□□□□□ -0.3
MSL3-215ENST00000482871 CUX2O14529 1486 aa13.15□□□□□ -0.3
MSL3-215ENST00000482871 URB2Q14146 1524 aaKnown RBP13.14□□□□□ -0.31
MSL3-215ENST00000482871 PDCD7Q8N8D1 485 aaKnown RBP13.14□□□□□ -0.31
MSL3-215ENST00000482871 FBXO22Q8NEZ5 403 aa13.14□□□□□ -0.31
MSL3-215ENST00000482871 ABCC8Q09428 1581 aa13.13□□□□□ -0.31
MSL3-215ENST00000482871 RYDENQ9NUL5 291 aaKnown RBP13.13□□□□□ -0.31
MSL3-215ENST00000482871 DPY19L2Q6NUT2 758 aa13.12□□□□□ -0.31
MSL3-215ENST00000482871 MS4A4AQ96JQ5 239 aa13.12□□□□□ -0.31
MSL3-215ENST00000482871 PLSCR2Q9NRY7 297 aa13.12□□□□□ -0.31
MSL3-215ENST00000482871 ILDR1Q86SU0 546 aaPredicted RBP13.11□□□□□ -0.31
MSL3-215ENST00000482871 TOPBP1Q92547 1522 aa13.1□□□□□ -0.31
MSL3-215ENST00000482871 GTPBP6O43824 516 aaPredicted RBP13.1□□□□□ -0.31
MSL3-215ENST00000482871 DNMBPQ6XZF7 1577 aa13.1□□□□□ -0.31
MSL3-215ENST00000482871 TMEM132AQ24JP5 1023 aa13.09□□□□□ -0.31
MSL3-215ENST00000482871 G3V3G9 751 aa13.07□□□□□ -0.32
MSL3-215ENST00000482871 CUX1P39880 1505 aa13.05□□□□□ -0.32
MSL3-215ENST00000482871 PPP1R37O75864 691 aa13.05□□□□□ -0.32
MSL3-215ENST00000482871 L3MBTL3Q96JM7 780 aaPredicted RBP13.05□□□□□ -0.32
MSL3-215ENST00000482871 WRNQ14191 1432 aaPredicted RBP eCLIP13.05□□□□□ -0.32
MSL3-215ENST00000482871 DAXXQ9UER7 740 aaPredicted RBP13.04□□□□□ -0.32
MSL3-215ENST00000482871 POTEB2H3BUK9 544 aa13.02□□□□□ -0.33
MSL3-215ENST00000482871 BOLA1Q9Y3E2 137 aa13.02□□□□□ -0.33
MSL3-215ENST00000482871 TOP2BQ02880 1626 aa12.99□□□□□ -0.33
MSL3-215ENST00000482871 SYNJ1O43426 1573 aa12.99□□□□□ -0.33
MSL3-215ENST00000482871 POLA1P09884 1462 aaPredicted RBP12.99□□□□□ -0.33
MSL3-215ENST00000482871 FGD5Q6ZNL6 1462 aa12.99□□□□□ -0.33
MSL3-215ENST00000482871 BIVM-ERCC5R4GMW8 1640 aa12.99□□□□□ -0.33
MSL3-215ENST00000482871 IFT140Q96RY7 1462 aa12.98□□□□□ -0.33
MSL3-215ENST00000482871 SOGA1O94964 1423 aa12.97□□□□□ -0.33
MSL3-215ENST00000482871 MICALL2Q8IY33 904 aa12.97□□□□□ -0.33
MSL3-215ENST00000482871 POTEJP0CG39 1038 aa12.95□□□□□ -0.34
MSL3-215ENST00000482871 C3orf67Q6ZVT6 689 aa12.95□□□□□ -0.34
MSL3-215ENST00000482871 RAD54L2Q9Y4B4 1467 aa12.95□□□□□ -0.34
MSL3-215ENST00000482871 TARBP1Q13395 1621 aaKnown RBP12.94□□□□□ -0.34
MSL3-215ENST00000482871 SCUBE2Q9NQ36 999 aa12.91□□□□□ -0.34
MSL3-215ENST00000482871 ZNF608Q9ULD9 1512 aaPredicted RBP12.9□□□□□ -0.34
MSL3-215ENST00000482871 MAMSTRQ6ZN01 415 aa12.9□□□□□ -0.34
MSL3-215ENST00000482871 TMEM121BQ9BXQ6 578 aaPredicted RBP12.9□□□□□ -0.34
MSL3-215ENST00000482871 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.9□□□□□ -0.34
MSL3-215ENST00000482871 C14orf37Q86TY3 774 aa12.89□□□□□ -0.35
MSL3-215ENST00000482871 TDRD9Q8NDG6 1382 aaKnown RBP12.88□□□□□ -0.35
MSL3-215ENST00000482871 AQRO60306 1485 aaKnown RBP eCLIP12.87□□□□□ -0.35
MSL3-215ENST00000482871 HOMEZQ8IX15 550 aa12.87□□□□□ -0.35
MSL3-215ENST00000482871 WDR97A6NE52 1622 aa12.87□□□□□ -0.35
MSL3-215ENST00000482871 ABCA10Q8WWZ4 1543 aa12.87□□□□□ -0.35
MSL3-215ENST00000482871 EIF4G3O43432 1585 aaKnown RBP12.86□□□□□ -0.35
MSL3-215ENST00000482871 P3H3Q8IVL6 736 aa12.85□□□□□ -0.35
MSL3-215ENST00000482871 SLAIN1Q8ND83 568 aa12.82□□□□□ -0.36
MSL3-215ENST00000482871 OTUD5Q96G74 571 aa12.82□□□□□ -0.36
MSL3-215ENST00000482871 GAPVD1Q14C86 1478 aa12.82□□□□□ -0.36
MSL3-215ENST00000482871 CADPS2Q86UW7 1296 aa12.81□□□□□ -0.36
MSL3-215ENST00000482871 ABCA5Q8WWZ7 1642 aa12.8□□□□□ -0.36
MSL3-215ENST00000482871 PBRM1Q86U86 1689 aa12.8□□□□□ -0.36
MSL3-215ENST00000482871 GRIN2BQ13224 1484 aa12.78□□□□□ -0.36
MSL3-215ENST00000482871 TMEM92Q6UXU6 159 aa12.78□□□□□ -0.36
MSL3-215ENST00000482871 TMC2Q8TDI7 906 aa12.78□□□□□ -0.36
MSL3-215ENST00000482871 KIF27Q86VH2 1401 aa12.78□□□□□ -0.36
MSL3-215ENST00000482871 LMOD2Q6P5Q4 547 aa12.75□□□□□ -0.37
MSL3-215ENST00000482871 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.75□□□□□ -0.37
MSL3-215ENST00000482871 SNAPC4Q5SXM2 1469 aa12.74□□□□□ -0.37
MSL3-215ENST00000482871 C2orf72A6NCS6 295 aa12.74□□□□□ -0.37
MSL3-215ENST00000482871 PDE4AP27815 886 aa12.74□□□□□ -0.37
MSL3-215ENST00000482871 MAGI1Q96QZ7 1491 aaPredicted RBP12.73□□□□□ -0.37
MSL3-215ENST00000482871 NCKAP5LQ9HCH0 1330 aa12.72□□□□□ -0.37
MSL3-215ENST00000482871 CHMP7Q8WUX9 453 aaPredicted RBP12.72□□□□□ -0.37
MSL3-215ENST00000482871 LARP6Q9BRS8 491 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms