RNA–Protein interactions for RNA: ENST00000479576.5

CCDC13-205, Transcript of coiled-coil domain containing 13, humanhuman

TSL 3

Gene CCDC13, Length 698 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC13-205ENST00000479576 DNMBPQ6XZF7 1577 aa11.61□□□□□ -0.55
CCDC13-205ENST00000479576 ABCC8Q09428 1581 aa11.6□□□□□ -0.55
CCDC13-205ENST00000479576 MKRN3Q13064 507 aaKnown RBP11.59□□□□□ -0.55
CCDC13-205ENST00000479576 TTBK1Q5TCY1 1321 aaPredicted RBP11.58□□□□□ -0.56
CCDC13-205ENST00000479576 EFCAB3Q8N7B9 438 aa11.57□□□□□ -0.56
CCDC13-205ENST00000479576 SLC39A7Q92504 469 aa11.57□□□□□ -0.56
CCDC13-205ENST00000479576 BIVM-ERCC5R4GMW8 1640 aa11.57□□□□□ -0.56
CCDC13-205ENST00000479576 SYNJ1O43426 1573 aa11.56□□□□□ -0.56
CCDC13-205ENST00000479576 IER5LQ5T953 404 aa11.56□□□□□ -0.56
CCDC13-205ENST00000479576 WRNQ14191 1432 aaPredicted RBP eCLIP11.55□□□□□ -0.56
CCDC13-205ENST00000479576 TOP2BQ02880 1626 aa11.55□□□□□ -0.56
CCDC13-205ENST00000479576 METRNQ9UJH8 293 aa11.54□□□□□ -0.56
CCDC13-205ENST00000479576 TARBP1Q13395 1621 aaKnown RBP11.53□□□□□ -0.56
CCDC13-205ENST00000479576 POLA1P09884 1462 aaPredicted RBP11.53□□□□□ -0.56
CCDC13-205ENST00000479576 FGD5Q6ZNL6 1462 aa11.53□□□□□ -0.56
CCDC13-205ENST00000479576 C7P10643 843 aa11.53□□□□□ -0.56
CCDC13-205ENST00000479576 SOX12O15370 315 aa11.51□□□□□ -0.57
CCDC13-205ENST00000479576 BBXQ8WY36 941 aaPredicted RBP11.51□□□□□ -0.57
CCDC13-205ENST00000479576 NKX1-1Q15270 411 aaPredicted RBP11.5□□□□□ -0.57
CCDC13-205ENST00000479576 RAD54L2Q9Y4B4 1467 aa11.5□□□□□ -0.57
CCDC13-205ENST00000479576 IRX5P78411 483 aaPredicted RBP11.49□□□□□ -0.57
CCDC13-205ENST00000479576 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.49□□□□□ -0.57
CCDC13-205ENST00000479576 IFT140Q96RY7 1462 aa11.49□□□□□ -0.57
CCDC13-205ENST00000479576 WDR97A6NE52 1622 aa11.49□□□□□ -0.57
CCDC13-205ENST00000479576 SEC24BO95487 1268 aa11.48□□□□□ -0.57
CCDC13-205ENST00000479576 PLCG2P16885 1265 aa11.48□□□□□ -0.57
CCDC13-205ENST00000479576 PHF8Q9UPP1 1060 aa11.48□□□□□ -0.57
CCDC13-205ENST00000479576 SOGA1O94964 1423 aa11.47□□□□□ -0.57
CCDC13-205ENST00000479576 MFRPQ9BY79 579 aa11.47□□□□□ -0.57
CCDC13-205ENST00000479576 ZNF608Q9ULD9 1512 aaPredicted RBP11.46□□□□□ -0.57
CCDC13-205ENST00000479576 NLRP6P59044 892 aa11.46□□□□□ -0.57
CCDC13-205ENST00000479576 ILDR1Q86SU0 546 aaPredicted RBP11.46□□□□□ -0.57
CCDC13-205ENST00000479576 OCEL1Q9H607 264 aa11.46□□□□□ -0.57
CCDC13-205ENST00000479576 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.45□□□□□ -0.58
CCDC13-205ENST00000479576 COLQQ9Y215 455 aaPredicted RBP11.45□□□□□ -0.58
CCDC13-205ENST00000479576 PDCD7Q8N8D1 485 aaKnown RBP11.44□□□□□ -0.58
CCDC13-205ENST00000479576 FBXO22Q8NEZ5 403 aa11.44□□□□□ -0.58
CCDC13-205ENST00000479576 POTEFA5A3E0 1075 aa11.43□□□□□ -0.58
CCDC13-205ENST00000479576 ABCA10Q8WWZ4 1543 aa11.43□□□□□ -0.58
CCDC13-205ENST00000479576 RYDENQ9NUL5 291 aaKnown RBP11.42□□□□□ -0.58
CCDC13-205ENST00000479576 MS4A4AQ96JQ5 239 aa11.41□□□□□ -0.58
CCDC13-205ENST00000479576 EIF4G3O43432 1585 aaKnown RBP11.41□□□□□ -0.58
CCDC13-205ENST00000479576 TDRD9Q8NDG6 1382 aaKnown RBP11.41□□□□□ -0.58
CCDC13-205ENST00000479576 AQRO60306 1485 aaKnown RBP eCLIP11.4□□□□□ -0.58
CCDC13-205ENST00000479576 ABCA5Q8WWZ7 1642 aa11.39□□□□□ -0.59
CCDC13-205ENST00000479576 GTPBP6O43824 516 aaPredicted RBP11.38□□□□□ -0.59
CCDC13-205ENST00000479576 RIMBP3CA6NJZ7 1639 aa11.38□□□□□ -0.59
CCDC13-205ENST00000479576 RIMBP3BA6NNM3 1639 aa11.38□□□□□ -0.59
CCDC13-205ENST00000479576 RIMBP3Q9UFD9 1639 aa11.38□□□□□ -0.59
CCDC13-205ENST00000479576 DPY19L2Q6NUT2 758 aa11.36□□□□□ -0.59
CCDC13-205ENST00000479576 SPRYD3Q8NCJ5 442 aa11.35□□□□□ -0.59
CCDC13-205ENST00000479576 GAPVD1Q14C86 1478 aa11.34□□□□□ -0.59
CCDC13-205ENST00000479576 PAXIP1Q6ZW49 1069 aaPredicted RBP11.34□□□□□ -0.59
CCDC13-205ENST00000479576 CFAP44Q96MT7 982 aa11.33□□□□□ -0.6
CCDC13-205ENST00000479576 PBRM1Q86U86 1689 aa11.33□□□□□ -0.6
CCDC13-205ENST00000479576 GRIN2BQ13224 1484 aa11.32□□□□□ -0.6
CCDC13-205ENST00000479576 POTEB2H3BUK9 544 aa11.31□□□□□ -0.6
CCDC13-205ENST00000479576 PPP1R37O75864 691 aa11.31□□□□□ -0.6
CCDC13-205ENST00000479576 L3MBTL3Q96JM7 780 aaPredicted RBP11.31□□□□□ -0.6
CCDC13-205ENST00000479576 BOLA1Q9Y3E2 137 aa11.31□□□□□ -0.6
CCDC13-205ENST00000479576 SNAPC4Q5SXM2 1469 aa11.31□□□□□ -0.6
CCDC13-205ENST00000479576 RUSC2Q8N2Y8 1516 aa11.3□□□□□ -0.6
CCDC13-205ENST00000479576 KIF27Q86VH2 1401 aa11.29□□□□□ -0.6
CCDC13-205ENST00000479576 G3V3G9 751 aa11.29□□□□□ -0.6
CCDC13-205ENST00000479576 ERICH3Q5RHP9 1530 aa11.29□□□□□ -0.6
CCDC13-205ENST00000479576 PLCB2Q00722 1185 aa11.28□□□□□ -0.6
CCDC13-205ENST00000479576 IGF1RP08069 1367 aa11.27□□□□□ -0.61
CCDC13-205ENST00000479576 MAGI1Q96QZ7 1491 aaPredicted RBP11.26□□□□□ -0.61
CCDC13-205ENST00000479576 ARHGEF11O15085 1522 aa11.26□□□□□ -0.61
CCDC13-205ENST00000479576 LHX8Q68G74 356 aa11.26□□□□□ -0.61
CCDC13-205ENST00000479576 MICALL2Q8IY33 904 aa11.26□□□□□ -0.61
CCDC13-205ENST00000479576 POTEJP0CG39 1038 aa11.25□□□□□ -0.61
CCDC13-205ENST00000479576 CYB5RLQ6IPT4 315 aa11.25□□□□□ -0.61
CCDC13-205ENST00000479576 TMEM121BQ9BXQ6 578 aaPredicted RBP11.25□□□□□ -0.61
CCDC13-205ENST00000479576 ADAMTS12P58397 1594 aa11.24□□□□□ -0.61
CCDC13-205ENST00000479576 CHD1O14646 1710 aa11.24□□□□□ -0.61
CCDC13-205ENST00000479576 HRCP23327 699 aa11.23□□□□□ -0.61
CCDC13-205ENST00000479576 SYNJ2O15056 1496 aa11.22□□□□□ -0.61
CCDC13-205ENST00000479576 C3orf67Q6ZVT6 689 aa11.22□□□□□ -0.61
CCDC13-205ENST00000479576 FHAD1B1AJZ9 1412 aa11.21□□□□□ -0.61
CCDC13-205ENST00000479576 MAMSTRQ6ZN01 415 aa11.21□□□□□ -0.61
CCDC13-205ENST00000479576 SCUBE2Q9NQ36 999 aa11.21□□□□□ -0.61
CCDC13-205ENST00000479576 CUL7Q14999 1698 aa11.2□□□□□ -0.62
CCDC13-205ENST00000479576 CHMP7Q8WUX9 453 aaPredicted RBP11.2□□□□□ -0.62
CCDC13-205ENST00000479576 FAM9AQ8IZU1 332 aaPredicted RBP11.19□□□□□ -0.62
CCDC13-205ENST00000479576 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.18□□□□□ -0.62
CCDC13-205ENST00000479576 GRIN2AQ12879 1464 aa11.18□□□□□ -0.62
CCDC13-205ENST00000479576 CARMIL1Q5VZK9 1371 aa11.17□□□□□ -0.62
CCDC13-205ENST00000479576 PRXQ9BXM0 1461 aa11.17□□□□□ -0.62
CCDC13-205ENST00000479576 EEA1Q15075 1411 aa11.16□□□□□ -0.62
CCDC13-205ENST00000479576 NUP160Q12769 1436 aa11.15□□□□□ -0.62
CCDC13-205ENST00000479576 CLASP1Q7Z460 1538 aa11.14□□□□□ -0.63
CCDC13-205ENST00000479576 OTUD5Q96G74 571 aa11.14□□□□□ -0.63
CCDC13-205ENST00000479576 CEP170Q5SW79 1584 aa11.14□□□□□ -0.63
CCDC13-205ENST00000479576 ARAP1Q96P48 1450 aa11.12□□□□□ -0.63
CCDC13-205ENST00000479576 RAPGEF2Q9Y4G8 1499 aa11.12□□□□□ -0.63
CCDC13-205ENST00000479576 CADPS2Q86UW7 1296 aa11.11□□□□□ -0.63
CCDC13-205ENST00000479576 TSHZ2Q9NRE2 1034 aa11.11□□□□□ -0.63
CCDC13-205ENST00000479576 HAP1P54257 671 aaPredicted RBP11.1□□□□□ -0.63
CCDC13-205ENST00000479576 TMEM92Q6UXU6 159 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms