RNA–Protein interactions for RNA: ENST00000479576.5

CCDC13-205, Transcript of coiled-coil domain containing 13, humanhuman

TSL 3

Gene CCDC13, Length 698 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC13-205ENST00000479576 AEBP2Q6ZN18 517 aaPredicted RBP23.73■■□□□ 1.39
CCDC13-205ENST00000479576 CHIC1Q5VXU3 224 aa23.16■■□□□ 1.3
CCDC13-205ENST00000479576 PHF23Q9BUL5 403 aaPredicted RBP20.35■□□□□ 0.85
CCDC13-205ENST00000479576 SENP3Q9H4L4 574 aaPredicted RBP20.17■□□□□ 0.82
CCDC13-205ENST00000479576 PLPPR3Q6T4P5 718 aa18.81■□□□□ 0.6
CCDC13-205ENST00000479576 FOXD1Q16676 465 aa18.69■□□□□ 0.58
CCDC13-205ENST00000479576 PPP6R1Q9UPN7 881 aa17.96■□□□□ 0.47
CCDC13-205ENST00000479576 ADRA2BP18089 450 aa17.95■□□□□ 0.46
CCDC13-205ENST00000479576 PIAS4Q8N2W9 510 aaPredicted RBP17.66■□□□□ 0.42
CCDC13-205ENST00000479576 MSH5O43196 834 aa17.28■□□□□ 0.36
CCDC13-205ENST00000479576 PPP4R3CPQ6ZMV5 832 aa16.56■□□□□ 0.24
CCDC13-205ENST00000479576 SCAF1Q9H7N4 1312 aaKnown RBP16.44■□□□□ 0.22
CCDC13-205ENST00000479576 MAPK8IP2Q13387 824 aaPredicted RBP16.28■□□□□ 0.2
CCDC13-205ENST00000479576 KCNA4P22459 653 aa16.16■□□□□ 0.18
CCDC13-205ENST00000479576 NCBP3Q53F19 620 aaKnown RBP16.13■□□□□ 0.17
CCDC13-205ENST00000479576 CNKSR2Q8WXI2 1034 aa16.11■□□□□ 0.17
CCDC13-205ENST00000479576 DMRT2Q9Y5R5 561 aa16.09■□□□□ 0.17
CCDC13-205ENST00000479576 NISCHQ9Y2I1 1504 aa16.07■□□□□ 0.16
CCDC13-205ENST00000479576 NPM3O75607 178 aaKnown RBP15.89■□□□□ 0.13
CCDC13-205ENST00000479576 RNF216Q9NWF9 866 aaPredicted RBP15.8■□□□□ 0.12
CCDC13-205ENST00000479576 POTEDQ86YR6 584 aa15.75■□□□□ 0.11
CCDC13-205ENST00000479576 HOXD11P31277 338 aaPredicted RBP15.74■□□□□ 0.11
CCDC13-205ENST00000479576 DNAJC5BQ9UF47 199 aa15.43■□□□□ 0.06
CCDC13-205ENST00000479576 DCAF8L1A6NGE4 600 aa15.4■□□□□ 0.06
CCDC13-205ENST00000479576 SLC4A1APQ9BWU0 796 aaKnown RBP15.4■□□□□ 0.06
CCDC13-205ENST00000479576 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.01□□□□□ -0.01
CCDC13-205ENST00000479576 SLC4A2P04920 1241 aa15□□□□□ -0.01
CCDC13-205ENST00000479576 EHMT2Q96KQ7 1210 aa14.94□□□□□ -0.02
CCDC13-205ENST00000479576 FOXD4L1Q9NU39 408 aa14.89□□□□□ -0.03
CCDC13-205ENST00000479576 ZBTB22O15209 634 aa14.87□□□□□ -0.03
CCDC13-205ENST00000479576 RNF39Q9H2S5 420 aa14.79□□□□□ -0.04
CCDC13-205ENST00000479576 U3KPZ7 1027 aaPredicted RBP14.76□□□□□ -0.05
CCDC13-205ENST00000479576 CSRNP3Q8WYN3 585 aa14.74□□□□□ -0.05
CCDC13-205ENST00000479576 MYCNP04198 464 aaPredicted RBP14.71□□□□□ -0.05
CCDC13-205ENST00000479576 C1QBPQ07021 282 aaKnown RBP14.61□□□□□ -0.07
CCDC13-205ENST00000479576 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.58□□□□□ -0.08
CCDC13-205ENST00000479576 HNRNPUL2Q1KMD3 747 aaKnown RBP14.58□□□□□ -0.08
CCDC13-205ENST00000479576 SAMD1Q6SPF0 538 aaPredicted RBP14.53□□□□□ -0.08
CCDC13-205ENST00000479576 APLP2Q06481 763 aa14.44□□□□□ -0.1
CCDC13-205ENST00000479576 CACNB1Q02641 598 aaPredicted RBP14.42□□□□□ -0.1
CCDC13-205ENST00000479576 ATXN8OSP0DMR3 200 aa14.36□□□□□ -0.11
CCDC13-205ENST00000479576 SPINK5Q9NQ38 1064 aaPredicted RBP14.34□□□□□ -0.11
CCDC13-205ENST00000479576 CAPN15O75808 1086 aa14.3□□□□□ -0.12
CCDC13-205ENST00000479576 ATF5Q9Y2D1 282 aaPredicted RBP14.28□□□□□ -0.12
CCDC13-205ENST00000479576 ZNF219Q9P2Y4 722 aaPredicted RBP14.24□□□□□ -0.13
CCDC13-205ENST00000479576 CCDC180Q9P1Z9 1646 aa14.23□□□□□ -0.13
CCDC13-205ENST00000479576 TRHP20396 242 aaPredicted RBP14.23□□□□□ -0.13
CCDC13-205ENST00000479576 DSG3P32926 999 aa14.06□□□□□ -0.16
CCDC13-205ENST00000479576 ABCB7O75027 752 aa14.04□□□□□ -0.16
CCDC13-205ENST00000479576 POLA2Q14181 598 aa13.98□□□□□ -0.17
CCDC13-205ENST00000479576 ZBTB12Q9Y330 459 aaPredicted RBP13.79□□□□□ -0.2
CCDC13-205ENST00000479576 ABCC9O60706 1549 aa13.76□□□□□ -0.21
CCDC13-205ENST00000479576 FBLN2P98095 1184 aa13.71□□□□□ -0.21
CCDC13-205ENST00000479576 MKRN4PQ13434 485 aaPredicted RBP13.67□□□□□ -0.22
CCDC13-205ENST00000479576 OSCARQ8IYS5 282 aa13.54□□□□□ -0.24
CCDC13-205ENST00000479576 ZCCHC6Q5VYS8 1495 aaKnown RBP13.42□□□□□ -0.26
CCDC13-205ENST00000479576 RBM42Q9BTD8 480 aaKnown RBP13.42□□□□□ -0.26
CCDC13-205ENST00000479576 SPDYE2BA6NHP3 402 aa13.4□□□□□ -0.26
CCDC13-205ENST00000479576 SPDYE6P0CI01 402 aa13.4□□□□□ -0.26
CCDC13-205ENST00000479576 SPDYE2Q495Y8 402 aa13.4□□□□□ -0.26
CCDC13-205ENST00000479576 SPDYE4A6NLX3 237 aa13.36□□□□□ -0.27
CCDC13-205ENST00000479576 FKBP8Q14318 412 aa13.35□□□□□ -0.27
CCDC13-205ENST00000479576 MYO15BQ96JP2 1530 aa13.34□□□□□ -0.27
CCDC13-205ENST00000479576 DCAF1Q9Y4B6 1507 aa13.34□□□□□ -0.27
CCDC13-205ENST00000479576 DCAF8L2P0C7V8 631 aa13.33□□□□□ -0.28
CCDC13-205ENST00000479576 ZNF692Q9BU19 519 aaPredicted RBP13.32□□□□□ -0.28
CCDC13-205ENST00000479576 NACADO15069 1562 aa13.32□□□□□ -0.28
CCDC13-205ENST00000479576 SSUH2Q9Y2M2 353 aa13.29□□□□□ -0.28
CCDC13-205ENST00000479576 RB1CC1Q8TDY2 1594 aa13.26□□□□□ -0.29
CCDC13-205ENST00000479576 AKT1S1Q96B36 256 aa13.23□□□□□ -0.29
CCDC13-205ENST00000479576 PABPN1Q86U42 306 aaKnown RBP eCLIP13.16□□□□□ -0.3
CCDC13-205ENST00000479576 PROM2Q8N271 834 aa13.13□□□□□ -0.31
CCDC13-205ENST00000479576 REM2Q8IYK8 340 aaPredicted RBP13.1□□□□□ -0.31
CCDC13-205ENST00000479576 UNC13AQ9UPW8 1703 aa13.09□□□□□ -0.31
CCDC13-205ENST00000479576 DNAJC5Q9H3Z4 198 aa13.06□□□□□ -0.32
CCDC13-205ENST00000479576 SPDYE1Q8NFV5 336 aaPredicted RBP13.01□□□□□ -0.33
CCDC13-205ENST00000479576 SCRIBQ14160 1630 aa12.98□□□□□ -0.33
CCDC13-205ENST00000479576 PITPNM1O00562 1244 aa12.97□□□□□ -0.33
CCDC13-205ENST00000479576 BICRAQ9NZM4 1560 aa12.96□□□□□ -0.33
CCDC13-205ENST00000479576 CLEC11AQ9Y240 323 aa12.94□□□□□ -0.34
CCDC13-205ENST00000479576 STAG3Q9UJ98 1225 aa12.93□□□□□ -0.34
CCDC13-205ENST00000479576 FBXO3Q9UK99 471 aa12.89□□□□□ -0.35
CCDC13-205ENST00000479576 CHRDL2Q6WN34 429 aa12.86□□□□□ -0.35
CCDC13-205ENST00000479576 PRR29P0C7W0 189 aa12.82□□□□□ -0.36
CCDC13-205ENST00000479576 SHROOM4Q9ULL8 1493 aa12.8□□□□□ -0.36
CCDC13-205ENST00000479576 VASPP50552 380 aaPredicted RBP12.73□□□□□ -0.37
CCDC13-205ENST00000479576 FXR2P51116 673 aaKnown RBP eCLIP12.71□□□□□ -0.37
CCDC13-205ENST00000479576 PIP4P2Q8N4L2 257 aa12.69□□□□□ -0.38
CCDC13-205ENST00000479576 MIER1Q8N108 512 aa12.66□□□□□ -0.38
CCDC13-205ENST00000479576 PLCD3Q8N3E9 789 aa12.66□□□□□ -0.38
CCDC13-205ENST00000479576 CREBZFQ9NS37 354 aa12.65□□□□□ -0.38
CCDC13-205ENST00000479576 PRKAR2AP13861 404 aaKnown RBP12.64□□□□□ -0.39
CCDC13-205ENST00000479576 PLEKHG5O94827 1062 aa12.63□□□□□ -0.39
CCDC13-205ENST00000479576 CHADLQ6NUI6 762 aa12.62□□□□□ -0.39
CCDC13-205ENST00000479576 EIF4G1Q04637 1599 aaKnown RBP12.53□□□□□ -0.4
CCDC13-205ENST00000479576 ZBTB47Q9UFB7 747 aaPredicted RBP12.53□□□□□ -0.4
CCDC13-205ENST00000479576 IFNLR1Q8IU57 520 aaPredicted RBP12.52□□□□□ -0.41
CCDC13-205ENST00000479576 CECR2Q9BXF3 1484 aa12.52□□□□□ -0.41
CCDC13-205ENST00000479576 MNX1P50219 401 aaPredicted RBP12.51□□□□□ -0.41
CCDC13-205ENST00000479576 FARP1Q9Y4F1 1045 aaPredicted RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms