RNA–Protein interactions for RNA: ENST00000479234.1

SCAF8-206, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 5

Gene SCAF8, Length 281 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-206ENST00000479234 EMP3P54852 163 aa9.84□□□□□ -0.83
SCAF8-206ENST00000479234 ILDR1Q86SU0 546 aaPredicted RBP9.84□□□□□ -0.83
SCAF8-206ENST00000479234 TNIKQ9UKE5 1360 aa9.84□□□□□ -0.83
SCAF8-206ENST00000479234 BAZ1BQ9UIG0 1483 aaKnown RBP9.83□□□□□ -0.84
SCAF8-206ENST00000479234 WRNQ14191 1432 aaPredicted RBP eCLIP9.82□□□□□ -0.84
SCAF8-206ENST00000479234 PDAP1Q13442 181 aaKnown RBP9.81□□□□□ -0.84
SCAF8-206ENST00000479234 SOGA1O94964 1423 aa9.81□□□□□ -0.84
SCAF8-206ENST00000479234 PPARGC1BQ86YN6 1023 aaKnown RBP9.79□□□□□ -0.84
SCAF8-206ENST00000479234 NCAPD3P42695 1498 aa9.77□□□□□ -0.85
SCAF8-206ENST00000479234 HS3ST6Q96QI5 342 aa9.76□□□□□ -0.85
SCAF8-206ENST00000479234 GOLGA3Q08378 1498 aa9.75□□□□□ -0.85
SCAF8-206ENST00000479234 CEP162Q5TB80 1403 aa9.74□□□□□ -0.85
SCAF8-206ENST00000479234 RUSC2Q8N2Y8 1516 aa9.74□□□□□ -0.85
SCAF8-206ENST00000479234 G3V3G9 751 aa9.74□□□□□ -0.85
SCAF8-206ENST00000479234 UBTFP17480 764 aaKnown RBP9.74□□□□□ -0.85
SCAF8-206ENST00000479234 KRTAP3-3Q9BYR6 98 aa9.74□□□□□ -0.85
SCAF8-206ENST00000479234 KRTAP3-2Q9BYR7 98 aa9.74□□□□□ -0.85
SCAF8-206ENST00000479234 SPOCK2Q92563 424 aa9.73□□□□□ -0.85
SCAF8-206ENST00000479234 HMGXB3Q12766 1538 aa9.72□□□□□ -0.85
SCAF8-206ENST00000479234 POTEB3A0JP26 581 aa9.72□□□□□ -0.85
SCAF8-206ENST00000479234 FAM205CA6NFA0 338 aa9.72□□□□□ -0.85
SCAF8-206ENST00000479234 POTEBQ6S5H4 581 aa9.72□□□□□ -0.85
SCAF8-206ENST00000479234 CABP2Q9NPB3 220 aa9.72□□□□□ -0.85
SCAF8-206ENST00000479234 BOLA1Q9Y3E2 137 aa9.72□□□□□ -0.85
SCAF8-206ENST00000479234 CEP164Q9UPV0 1460 aa9.72□□□□□ -0.85
SCAF8-206ENST00000479234 DPY19L2Q6NUT2 758 aa9.7□□□□□ -0.86
SCAF8-206ENST00000479234 SYNJ1O43426 1573 aa9.7□□□□□ -0.86
SCAF8-206ENST00000479234 KIF21BO75037 1637 aa9.68□□□□□ -0.86
SCAF8-206ENST00000479234 HOXB3P14651 431 aaPredicted RBP9.68□□□□□ -0.86
SCAF8-206ENST00000479234 CIZ1Q9ULV3 898 aaPredicted RBP9.68□□□□□ -0.86
SCAF8-206ENST00000479234 HOXB1P14653 301 aaPredicted RBP9.66□□□□□ -0.86
SCAF8-206ENST00000479234 DOK7Q18PE1 504 aa9.66□□□□□ -0.86
SCAF8-206ENST00000479234 IFNLR1Q8IU57 520 aaPredicted RBP9.66□□□□□ -0.86
SCAF8-206ENST00000479234 TOP2BQ02880 1626 aa9.66□□□□□ -0.86
SCAF8-206ENST00000479234 ZNF710Q8N1W2 664 aa9.64□□□□□ -0.87
SCAF8-206ENST00000479234 CFTRP13569 1480 aa9.63□□□□□ -0.87
SCAF8-206ENST00000479234 BIVM-ERCC5R4GMW8 1640 aa9.62□□□□□ -0.87
SCAF8-206ENST00000479234 CLIP1P30622 1438 aa9.61□□□□□ -0.87
SCAF8-206ENST00000479234 RIMBP2O15034 1052 aa9.6□□□□□ -0.87
SCAF8-206ENST00000479234 CCER1Q8TC90 406 aaPredicted RBP9.59□□□□□ -0.87
SCAF8-206ENST00000479234 ERBB3P21860 1342 aa9.58□□□□□ -0.88
SCAF8-206ENST00000479234 PRXQ9BXM0 1461 aa9.58□□□□□ -0.88
SCAF8-206ENST00000479234 RAPGEF2Q9Y4G8 1499 aa9.58□□□□□ -0.88
SCAF8-206ENST00000479234 VPS8Q8N3P4 1428 aa9.57□□□□□ -0.88
SCAF8-206ENST00000479234 ERICH3Q5RHP9 1530 aa9.57□□□□□ -0.88
SCAF8-206ENST00000479234 EFCAB3Q8N7B9 438 aa9.57□□□□□ -0.88
SCAF8-206ENST00000479234 KIF27Q86VH2 1401 aa9.56□□□□□ -0.88
SCAF8-206ENST00000479234 ZSWIM6Q9HCJ5 1215 aa9.56□□□□□ -0.88
SCAF8-206ENST00000479234 CUX1P39880 1505 aa9.56□□□□□ -0.88
SCAF8-206ENST00000479234 CADPSQ9ULU8 1353 aa9.55□□□□□ -0.88
SCAF8-206ENST00000479234 MICALL2Q8IY33 904 aa9.54□□□□□ -0.88
SCAF8-206ENST00000479234 SOX12O15370 315 aa9.51□□□□□ -0.89
SCAF8-206ENST00000479234 VARS2Q5ST30 1063 aaKnown RBP9.51□□□□□ -0.89
SCAF8-206ENST00000479234 RNF166Q96A37 237 aaPredicted RBP9.51□□□□□ -0.89
SCAF8-206ENST00000479234 TMEM92Q6UXU6 159 aa9.49□□□□□ -0.89
SCAF8-206ENST00000479234 TTBK1Q5TCY1 1321 aaPredicted RBP9.49□□□□□ -0.89
SCAF8-206ENST00000479234 RIOK3O14730 519 aaKnown RBP9.47□□□□□ -0.89
SCAF8-206ENST00000479234 PTGER2P43116 358 aa9.47□□□□□ -0.89
SCAF8-206ENST00000479234 AMER1Q5JTC6 1135 aaPredicted RBP9.47□□□□□ -0.89
SCAF8-206ENST00000479234 ZNF687Q8N1G0 1237 aa9.47□□□□□ -0.89
SCAF8-206ENST00000479234 PRDM2Q13029 1718 aa9.47□□□□□ -0.89
SCAF8-206ENST00000479234 IGF1RP08069 1367 aa9.47□□□□□ -0.89
SCAF8-206ENST00000479234 GPR153Q6NV75 609 aa9.46□□□□□ -0.9
SCAF8-206ENST00000479234 MS4A4AQ96JQ5 239 aa9.46□□□□□ -0.9
SCAF8-206ENST00000479234 MYT1LQ9UL68 1186 aa9.46□□□□□ -0.9
SCAF8-206ENST00000479234 VGFO15240 615 aaPredicted RBP9.45□□□□□ -0.9
SCAF8-206ENST00000479234 ARAP1Q96P48 1450 aa9.45□□□□□ -0.9
SCAF8-206ENST00000479234 CC2D2AQ9P2K1 1620 aa9.45□□□□□ -0.9
SCAF8-206ENST00000479234 CUX2O14529 1486 aa9.43□□□□□ -0.9
SCAF8-206ENST00000479234 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.43□□□□□ -0.9
SCAF8-206ENST00000479234 RNF25Q96BH1 459 aaPredicted RBP9.43□□□□□ -0.9
SCAF8-206ENST00000479234 ZFP91Q96JP5 570 aaPredicted RBP9.43□□□□□ -0.9
SCAF8-206ENST00000479234 RTN4Q9NQC3 1192 aaKnown RBP9.43□□□□□ -0.9
SCAF8-206ENST00000479234 CARMIL1Q5VZK9 1371 aa9.42□□□□□ -0.9
SCAF8-206ENST00000479234 RANGAP1P46060 587 aaPredicted RBP9.41□□□□□ -0.9
SCAF8-206ENST00000479234 PHF8Q9UPP1 1060 aa9.41□□□□□ -0.9
SCAF8-206ENST00000479234 FANCD2Q9BXW9 1451 aa9.4□□□□□ -0.9
SCAF8-206ENST00000479234 FGD5Q6ZNL6 1462 aa9.4□□□□□ -0.91
SCAF8-206ENST00000479234 CLSPNQ9HAW4 1339 aa9.39□□□□□ -0.91
SCAF8-206ENST00000479234 ARHGAP35Q9NRY4 1499 aa9.39□□□□□ -0.91
SCAF8-206ENST00000479234 MAP3K1Q13233 1512 aa9.37□□□□□ -0.91
SCAF8-206ENST00000479234 ZNF316A6NFI3 1004 aaPredicted RBP9.37□□□□□ -0.91
SCAF8-206ENST00000479234 KANK4Q5T7N3 995 aaPredicted RBP9.37□□□□□ -0.91
SCAF8-206ENST00000479234 DIEXFQ68CQ4 756 aaKnown RBP9.37□□□□□ -0.91
SCAF8-206ENST00000479234 NLRP6P59044 892 aa9.36□□□□□ -0.91
SCAF8-206ENST00000479234 ARSIQ5FYB1 569 aa9.36□□□□□ -0.91
SCAF8-206ENST00000479234 RRBP1Q9P2E9 1410 aaKnown RBP9.36□□□□□ -0.91
SCAF8-206ENST00000479234 DNMBPQ6XZF7 1577 aa9.36□□□□□ -0.91
SCAF8-206ENST00000479234 ABCA10Q8WWZ4 1543 aa9.36□□□□□ -0.91
SCAF8-206ENST00000479234 TAOK2Q9UL54 1235 aa9.35□□□□□ -0.91
SCAF8-206ENST00000479234 TOPBP1Q92547 1522 aa9.33□□□□□ -0.92
SCAF8-206ENST00000479234 FBXO22Q8NEZ5 403 aa9.33□□□□□ -0.92
SCAF8-206ENST00000479234 LAMC3Q9Y6N6 1575 aa9.33□□□□□ -0.92
SCAF8-206ENST00000479234 FHAD1B1AJZ9 1412 aa9.32□□□□□ -0.92
SCAF8-206ENST00000479234 LSM11P83369 360 aaKnown RBP eCLIP9.31□□□□□ -0.92
SCAF8-206ENST00000479234 CCNB3Q8WWL7 1395 aa9.31□□□□□ -0.92
SCAF8-206ENST00000479234 POLA1P09884 1462 aaPredicted RBP9.31□□□□□ -0.92
SCAF8-206ENST00000479234 PDS5BQ9NTI5 1447 aa9.31□□□□□ -0.92
SCAF8-206ENST00000479234 PBX2P40425 430 aa9.3□□□□□ -0.92
SCAF8-206ENST00000479234 RAD54L2Q9Y4B4 1467 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms