RNA–Protein interactions for RNA: ENST00000479234.1

SCAF8-206, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 5

Gene SCAF8, Length 281 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-206ENST00000479234 AEBP2Q6ZN18 517 aaPredicted RBP21.87■■□□□ 1.09
SCAF8-206ENST00000479234 CHIC1Q5VXU3 224 aa20.58■□□□□ 0.89
SCAF8-206ENST00000479234 SENP3Q9H4L4 574 aaPredicted RBP18.77■□□□□ 0.6
SCAF8-206ENST00000479234 PHF23Q9BUL5 403 aaPredicted RBP18.43■□□□□ 0.54
SCAF8-206ENST00000479234 FOXD1Q16676 465 aa17.46■□□□□ 0.39
SCAF8-206ENST00000479234 MSH5O43196 834 aa16.52■□□□□ 0.24
SCAF8-206ENST00000479234 POTEDQ86YR6 584 aa16.47■□□□□ 0.23
SCAF8-206ENST00000479234 PLPPR3Q6T4P5 718 aa16.35■□□□□ 0.21
SCAF8-206ENST00000479234 PIAS4Q8N2W9 510 aaPredicted RBP16.27■□□□□ 0.2
SCAF8-206ENST00000479234 PPP6R1Q9UPN7 881 aa16.09■□□□□ 0.17
SCAF8-206ENST00000479234 ADRA2BP18089 450 aa16.02■□□□□ 0.16
SCAF8-206ENST00000479234 DMRT2Q9Y5R5 561 aa14.83□□□□□ -0.04
SCAF8-206ENST00000479234 MAPK8IP2Q13387 824 aaPredicted RBP14.77□□□□□ -0.05
SCAF8-206ENST00000479234 SCAF1Q9H7N4 1312 aaKnown RBP14.76□□□□□ -0.05
SCAF8-206ENST00000479234 CACNB1Q02641 598 aaPredicted RBP14.26□□□□□ -0.13
SCAF8-206ENST00000479234 PPP4R3CPQ6ZMV5 832 aa14.26□□□□□ -0.13
SCAF8-206ENST00000479234 HOXD11P31277 338 aaPredicted RBP14.2□□□□□ -0.14
SCAF8-206ENST00000479234 DCAF8L1A6NGE4 600 aa14.16□□□□□ -0.14
SCAF8-206ENST00000479234 CNKSR2Q8WXI2 1034 aa14.09□□□□□ -0.15
SCAF8-206ENST00000479234 RNF39Q9H2S5 420 aa14.04□□□□□ -0.16
SCAF8-206ENST00000479234 RNF216Q9NWF9 866 aaPredicted RBP14.04□□□□□ -0.16
SCAF8-206ENST00000479234 C1QBPQ07021 282 aaKnown RBP13.84□□□□□ -0.19
SCAF8-206ENST00000479234 DNAJC5BQ9UF47 199 aa13.84□□□□□ -0.19
SCAF8-206ENST00000479234 NCBP3Q53F19 620 aaKnown RBP13.69□□□□□ -0.22
SCAF8-206ENST00000479234 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.48□□□□□ -0.25
SCAF8-206ENST00000479234 NPM3O75607 178 aaKnown RBP13.44□□□□□ -0.26
SCAF8-206ENST00000479234 NISCHQ9Y2I1 1504 aa13.28□□□□□ -0.28
SCAF8-206ENST00000479234 U3KPZ7 1027 aaPredicted RBP13.19□□□□□ -0.3
SCAF8-206ENST00000479234 CAPN15O75808 1086 aa13.04□□□□□ -0.32
SCAF8-206ENST00000479234 DSG3P32926 999 aa13.04□□□□□ -0.32
SCAF8-206ENST00000479234 SPINK5Q9NQ38 1064 aaPredicted RBP13.03□□□□□ -0.32
SCAF8-206ENST00000479234 KCNA4P22459 653 aa12.94□□□□□ -0.34
SCAF8-206ENST00000479234 APLP2Q06481 763 aa12.89□□□□□ -0.35
SCAF8-206ENST00000479234 SLC4A2P04920 1241 aa12.88□□□□□ -0.35
SCAF8-206ENST00000479234 POTEHQ6S545 545 aa12.87□□□□□ -0.35
SCAF8-206ENST00000479234 ZNF219Q9P2Y4 722 aaPredicted RBP12.82□□□□□ -0.36
SCAF8-206ENST00000479234 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.79□□□□□ -0.36
SCAF8-206ENST00000479234 HNRNPUL2Q1KMD3 747 aaKnown RBP12.79□□□□□ -0.36
SCAF8-206ENST00000479234 TRHP20396 242 aaPredicted RBP12.76□□□□□ -0.37
SCAF8-206ENST00000479234 ABCB7O75027 752 aa12.69□□□□□ -0.38
SCAF8-206ENST00000479234 SAMD1Q6SPF0 538 aaPredicted RBP12.69□□□□□ -0.38
SCAF8-206ENST00000479234 RBM42Q9BTD8 480 aaKnown RBP12.53□□□□□ -0.4
SCAF8-206ENST00000479234 MYCNP04198 464 aaPredicted RBP12.49□□□□□ -0.41
SCAF8-206ENST00000479234 POLA2Q14181 598 aa12.36□□□□□ -0.43
SCAF8-206ENST00000479234 CHRDL2Q6WN34 429 aa12.29□□□□□ -0.44
SCAF8-206ENST00000479234 FOXD4L1Q9NU39 408 aa12.21□□□□□ -0.45
SCAF8-206ENST00000479234 ZBTB12Q9Y330 459 aaPredicted RBP12.2□□□□□ -0.46
SCAF8-206ENST00000479234 SLC4A1APQ9BWU0 796 aaKnown RBP12.19□□□□□ -0.46
SCAF8-206ENST00000479234 AKT1S1Q96B36 256 aa12.15□□□□□ -0.46
SCAF8-206ENST00000479234 ATF5Q9Y2D1 282 aaPredicted RBP12.12□□□□□ -0.47
SCAF8-206ENST00000479234 OSCARQ8IYS5 282 aa12□□□□□ -0.49
SCAF8-206ENST00000479234 REM2Q8IYK8 340 aaPredicted RBP11.99□□□□□ -0.49
SCAF8-206ENST00000479234 SP7Q8TDD2 431 aaPredicted RBP11.96□□□□□ -0.49
SCAF8-206ENST00000479234 PIP4P2Q8N4L2 257 aa11.93□□□□□ -0.5
SCAF8-206ENST00000479234 ATXN8OSP0DMR3 200 aa11.89□□□□□ -0.51
SCAF8-206ENST00000479234 ZBTB22O15209 634 aa11.88□□□□□ -0.51
SCAF8-206ENST00000479234 PITPNM1O00562 1244 aa11.87□□□□□ -0.51
SCAF8-206ENST00000479234 FXR2P51116 673 aaKnown RBP eCLIP11.83□□□□□ -0.52
SCAF8-206ENST00000479234 SPDYE2BA6NHP3 402 aa11.77□□□□□ -0.53
SCAF8-206ENST00000479234 SPDYE6P0CI01 402 aa11.77□□□□□ -0.53
SCAF8-206ENST00000479234 SPDYE2Q495Y8 402 aa11.77□□□□□ -0.53
SCAF8-206ENST00000479234 HAX1O00165 279 aa11.75□□□□□ -0.53
SCAF8-206ENST00000479234 FBLN2P98095 1184 aa11.75□□□□□ -0.53
SCAF8-206ENST00000479234 SPDYE1Q8NFV5 336 aaPredicted RBP11.62□□□□□ -0.55
SCAF8-206ENST00000479234 SSUH2Q9Y2M2 353 aa11.59□□□□□ -0.55
SCAF8-206ENST00000479234 MKRN4PQ13434 485 aaPredicted RBP11.58□□□□□ -0.56
SCAF8-206ENST00000479234 PRKAR2AP13861 404 aaKnown RBP11.55□□□□□ -0.56
SCAF8-206ENST00000479234 EVX2Q03828 476 aa11.55□□□□□ -0.56
SCAF8-206ENST00000479234 CLEC11AQ9Y240 323 aa11.54□□□□□ -0.56
SCAF8-206ENST00000479234 ZNF692Q9BU19 519 aaPredicted RBP11.53□□□□□ -0.56
SCAF8-206ENST00000479234 C19orf67A6NJJ6 358 aa11.47□□□□□ -0.57
SCAF8-206ENST00000479234 EHMT2Q96KQ7 1210 aa11.44□□□□□ -0.58
SCAF8-206ENST00000479234 PABPN1Q86U42 306 aaKnown RBP eCLIP11.36□□□□□ -0.59
SCAF8-206ENST00000479234 PRR29P0C7W0 189 aa11.34□□□□□ -0.59
SCAF8-206ENST00000479234 CCDC180Q9P1Z9 1646 aa11.34□□□□□ -0.59
SCAF8-206ENST00000479234 GABBR2O75899 941 aa11.33□□□□□ -0.6
SCAF8-206ENST00000479234 CHADLQ6NUI6 762 aa11.33□□□□□ -0.6
SCAF8-206ENST00000479234 CSRNP3Q8WYN3 585 aa11.26□□□□□ -0.61
SCAF8-206ENST00000479234 ZCCHC6Q5VYS8 1495 aaKnown RBP11.2□□□□□ -0.62
SCAF8-206ENST00000479234 CD44P16070 742 aaKnown RBP11.19□□□□□ -0.62
SCAF8-206ENST00000479234 LHX8Q68G74 356 aa11.19□□□□□ -0.62
SCAF8-206ENST00000479234 CLCN6P51797 869 aa11.18□□□□□ -0.62
SCAF8-206ENST00000479234 FARP1Q9Y4F1 1045 aaPredicted RBP11.18□□□□□ -0.62
SCAF8-206ENST00000479234 POTEIP0CG38 1075 aa11.07□□□□□ -0.64
SCAF8-206ENST00000479234 SHROOM4Q9ULL8 1493 aa11.06□□□□□ -0.64
SCAF8-206ENST00000479234 ZNF579Q8NAF0 562 aaKnown RBP11.05□□□□□ -0.64
SCAF8-206ENST00000479234 STAG3Q9UJ98 1225 aa11.05□□□□□ -0.64
SCAF8-206ENST00000479234 CREBZFQ9NS37 354 aa11□□□□□ -0.65
SCAF8-206ENST00000479234 DCAF1Q9Y4B6 1507 aa10.99□□□□□ -0.65
SCAF8-206ENST00000479234 DCBLD2Q96PD2 775 aa10.99□□□□□ -0.65
SCAF8-206ENST00000479234 ZRANB1Q9UGI0 708 aa10.97□□□□□ -0.65
SCAF8-206ENST00000479234 SPDYE4A6NLX3 237 aa10.93□□□□□ -0.66
SCAF8-206ENST00000479234 DCAF8L2P0C7V8 631 aa10.91□□□□□ -0.66
SCAF8-206ENST00000479234 PAK3O75914 559 aaPredicted RBP10.89□□□□□ -0.67
SCAF8-206ENST00000479234 SUPT5HO00267 1087 aaKnown RBP10.87□□□□□ -0.67
SCAF8-206ENST00000479234 GALR2O43603 387 aaPredicted RBP10.86□□□□□ -0.67
SCAF8-206ENST00000479234 NPM1P06748 294 aaKnown RBP eCLIP10.84□□□□□ -0.67
SCAF8-206ENST00000479234 MNX1P50219 401 aaPredicted RBP10.79□□□□□ -0.68
SCAF8-206ENST00000479234 PHF12Q96QT6 1004 aa10.79□□□□□ -0.68
SCAF8-206ENST00000479234 MYO15BQ96JP2 1530 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms