RNA–Protein interactions for RNA: ENST00000476967.1

CNOT10-214, Transcript of CCR4-NOT transcription complex subunit 10, humanhuman

TSL 2

Gene CNOT10, Length 354 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT10-214ENST00000476967 SMARCA4P51532 1647 aa6.36□□□□□ -1.39
CNOT10-214ENST00000476967 PLEKHG5O94827 1062 aa6.34□□□□□ -1.39
CNOT10-214ENST00000476967 PLCG2P16885 1265 aa6.34□□□□□ -1.39
CNOT10-214ENST00000476967 TMEM121BQ9BXQ6 578 aaPredicted RBP6.34□□□□□ -1.39
CNOT10-214ENST00000476967 PEG3Q9GZU2 1588 aa6.33□□□□□ -1.4
CNOT10-214ENST00000476967 TMEM132AQ24JP5 1023 aa6.33□□□□□ -1.4
CNOT10-214ENST00000476967 MARVELD3Q96A59 401 aa6.32□□□□□ -1.4
CNOT10-214ENST00000476967 OCEL1Q9H607 264 aa6.32□□□□□ -1.4
CNOT10-214ENST00000476967 PODXL2Q9NZ53 605 aa6.32□□□□□ -1.4
CNOT10-214ENST00000476967 CEP164Q9UPV0 1460 aa6.32□□□□□ -1.4
CNOT10-214ENST00000476967 ARAP1Q96P48 1450 aa6.31□□□□□ -1.4
CNOT10-214ENST00000476967 POTEB3A0JP26 581 aa6.31□□□□□ -1.4
CNOT10-214ENST00000476967 POTEBQ6S5H4 581 aa6.31□□□□□ -1.4
CNOT10-214ENST00000476967 BBXQ8WY36 941 aaPredicted RBP6.31□□□□□ -1.4
CNOT10-214ENST00000476967 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.31□□□□□ -1.4
CNOT10-214ENST00000476967 C14orf37Q86TY3 774 aa6.29□□□□□ -1.4
CNOT10-214ENST00000476967 PLCD3Q8N3E9 789 aa6.29□□□□□ -1.4
CNOT10-214ENST00000476967 RSF1Q96T23 1441 aaPredicted RBP6.29□□□□□ -1.4
CNOT10-214ENST00000476967 MYT1Q01538 1121 aa6.28□□□□□ -1.4
CNOT10-214ENST00000476967 KRTAP3-3Q9BYR6 98 aa6.28□□□□□ -1.4
CNOT10-214ENST00000476967 KRTAP3-2Q9BYR7 98 aa6.28□□□□□ -1.4
CNOT10-214ENST00000476967 SNPHO15079 494 aa6.27□□□□□ -1.41
CNOT10-214ENST00000476967 FANCD2Q9BXW9 1451 aa6.27□□□□□ -1.41
CNOT10-214ENST00000476967 PKD2Q13563 968 aa6.26□□□□□ -1.41
CNOT10-214ENST00000476967 PDCD7Q8N8D1 485 aaKnown RBP6.26□□□□□ -1.41
CNOT10-214ENST00000476967 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.26□□□□□ -1.41
CNOT10-214ENST00000476967 FAM212AQ96EL1 285 aa6.25□□□□□ -1.41
CNOT10-214ENST00000476967 VASPP50552 380 aaPredicted RBP6.24□□□□□ -1.41
CNOT10-214ENST00000476967 ZBTB47Q9UFB7 747 aaPredicted RBP6.24□□□□□ -1.41
CNOT10-214ENST00000476967 PCDHB8Q9UN66 801 aa6.24□□□□□ -1.41
CNOT10-214ENST00000476967 PYGBP11216 843 aa6.23□□□□□ -1.41
CNOT10-214ENST00000476967 PAXIP1Q6ZW49 1069 aaPredicted RBP6.23□□□□□ -1.41
CNOT10-214ENST00000476967 IFT140Q96RY7 1462 aa6.22□□□□□ -1.41
CNOT10-214ENST00000476967 URB2Q14146 1524 aaKnown RBP6.22□□□□□ -1.41
CNOT10-214ENST00000476967 HS3ST6Q96QI5 342 aa6.22□□□□□ -1.41
CNOT10-214ENST00000476967 EMP3P54852 163 aa6.21□□□□□ -1.42
CNOT10-214ENST00000476967 ZNF608Q9ULD9 1512 aaPredicted RBP6.2□□□□□ -1.42
CNOT10-214ENST00000476967 CHD1O14646 1710 aa6.2□□□□□ -1.42
CNOT10-214ENST00000476967 IFNLR1Q8IU57 520 aaPredicted RBP6.2□□□□□ -1.42
CNOT10-214ENST00000476967 CFAP44Q96MT7 982 aa6.2□□□□□ -1.42
CNOT10-214ENST00000476967 CFTRP13569 1480 aa6.2□□□□□ -1.42
CNOT10-214ENST00000476967 FAM205CA6NFA0 338 aa6.19□□□□□ -1.42
CNOT10-214ENST00000476967 NBR1Q14596 966 aa6.19□□□□□ -1.42
CNOT10-214ENST00000476967 NPM2Q86SE8 214 aaKnown RBP6.19□□□□□ -1.42
CNOT10-214ENST00000476967 KLHL34Q8N239 644 aa6.19□□□□□ -1.42
CNOT10-214ENST00000476967 DCAF8Q5TAQ9 597 aa6.18□□□□□ -1.42
CNOT10-214ENST00000476967 SPRYD3Q8NCJ5 442 aa6.17□□□□□ -1.42
CNOT10-214ENST00000476967 EIF4G3O43432 1585 aaKnown RBP6.16□□□□□ -1.42
CNOT10-214ENST00000476967 MROH2BQ7Z745 1585 aa6.16□□□□□ -1.42
CNOT10-214ENST00000476967 KDM4FA0A1W2PPD8 638 aa6.16□□□□□ -1.42
CNOT10-214ENST00000476967 L3MBTL3Q96JM7 780 aaPredicted RBP6.16□□□□□ -1.42
CNOT10-214ENST00000476967 HOXB3P14651 431 aaPredicted RBP6.15□□□□□ -1.42
CNOT10-214ENST00000476967 C3orf67Q6ZVT6 689 aa6.15□□□□□ -1.42
CNOT10-214ENST00000476967 TSHZ2Q9NRE2 1034 aa6.15□□□□□ -1.42
CNOT10-214ENST00000476967 DPY19L2Q6NUT2 758 aa6.14□□□□□ -1.43
CNOT10-214ENST00000476967 FBXO41Q8TF61 875 aa6.14□□□□□ -1.43
CNOT10-214ENST00000476967 CLASP1Q7Z460 1538 aa6.13□□□□□ -1.43
CNOT10-214ENST00000476967 ABCC8Q09428 1581 aa6.13□□□□□ -1.43
CNOT10-214ENST00000476967 MKRN3Q13064 507 aaKnown RBP6.12□□□□□ -1.43
CNOT10-214ENST00000476967 ERCC6L2Q5T890 1561 aa6.12□□□□□ -1.43
CNOT10-214ENST00000476967 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.12□□□□□ -1.43
CNOT10-214ENST00000476967 SYNJ1O43426 1573 aa6.11□□□□□ -1.43
CNOT10-214ENST00000476967 AQRO60306 1485 aaKnown RBP eCLIP6.11□□□□□ -1.431e-7■□□□□ 10.4
CNOT10-214ENST00000476967 GAPVD1Q14C86 1478 aa6.11□□□□□ -1.43
CNOT10-214ENST00000476967 PRDM2Q13029 1718 aa6.11□□□□□ -1.43
CNOT10-214ENST00000476967 TOPBP1Q92547 1522 aa6.09□□□□□ -1.43
CNOT10-214ENST00000476967 KIF13AQ9H1H9 1805 aa6.09□□□□□ -1.43
CNOT10-214ENST00000476967 ECM2O94769 699 aaPredicted RBP6.09□□□□□ -1.43
CNOT10-214ENST00000476967 CHRM1P11229 460 aaPredicted RBP6.09□□□□□ -1.43
CNOT10-214ENST00000476967 HOXB1P14653 301 aaPredicted RBP6.09□□□□□ -1.43
CNOT10-214ENST00000476967 PSEN1P49768 467 aa6.09□□□□□ -1.43
CNOT10-214ENST00000476967 ZNF467Q7Z7K2 595 aaPredicted RBP6.09□□□□□ -1.43
CNOT10-214ENST00000476967 CHMP7Q8WUX9 453 aaPredicted RBP6.09□□□□□ -1.43
CNOT10-214ENST00000476967 LMTK3Q96Q04 1460 aa6.09□□□□□ -1.44
CNOT10-214ENST00000476967 TARBP1Q13395 1621 aaKnown RBP6.08□□□□□ -1.44
CNOT10-214ENST00000476967 SUPT5HO00267 1087 aaKnown RBP6.08□□□□□ -1.44
CNOT10-214ENST00000476967 SOCS7O14512 581 aa6.08□□□□□ -1.44
CNOT10-214ENST00000476967 TRIM26Q12899 539 aaPredicted RBP6.07□□□□□ -1.44
CNOT10-214ENST00000476967 GOLGA2Q08379 1002 aa6.06□□□□□ -1.44
CNOT10-214ENST00000476967 WIZO95785 1651 aa6.06□□□□□ -1.44
CNOT10-214ENST00000476967 GSE1Q14687 1217 aa6.05□□□□□ -1.44
CNOT10-214ENST00000476967 RNF166Q96A37 237 aaPredicted RBP6.05□□□□□ -1.44
CNOT10-214ENST00000476967 BOLA1Q9Y3E2 137 aa6.05□□□□□ -1.44
CNOT10-214ENST00000476967 HECW2Q9P2P5 1572 aa6.05□□□□□ -1.44
CNOT10-214ENST00000476967 MAGI1Q96QZ7 1491 aaPredicted RBP6.04□□□□□ -1.44
CNOT10-214ENST00000476967 WDR97A6NE52 1622 aa6.04□□□□□ -1.44
CNOT10-214ENST00000476967 SPOCK2Q92563 424 aa6.04□□□□□ -1.44
CNOT10-214ENST00000476967 DNMBPQ6XZF7 1577 aa6.04□□□□□ -1.44
CNOT10-214ENST00000476967 KDM6BO15054 1643 aa6.03□□□□□ -1.44
CNOT10-214ENST00000476967 ERBB3P21860 1342 aa6.03□□□□□ -1.44
CNOT10-214ENST00000476967 SNAPC4Q5SXM2 1469 aa6.02□□□□□ -1.44
CNOT10-214ENST00000476967 FAM69CQ0P6D2 419 aa6.02□□□□□ -1.45
CNOT10-214ENST00000476967 SYNJ2O15056 1496 aa6.02□□□□□ -1.45
CNOT10-214ENST00000476967 ABCC10Q5T3U5 1492 aa6.02□□□□□ -1.45
CNOT10-214ENST00000476967 UBTFP17480 764 aaKnown RBP6.01□□□□□ -1.45
CNOT10-214ENST00000476967 PDAP1Q13442 181 aaKnown RBP6.01□□□□□ -1.45
CNOT10-214ENST00000476967 CABP2Q9NPB3 220 aa6.01□□□□□ -1.45
CNOT10-214ENST00000476967 RGL2O15211 777 aa6□□□□□ -1.45
CNOT10-214ENST00000476967 DOK7Q18PE1 504 aa6□□□□□ -1.45
CNOT10-214ENST00000476967 VARS2Q5ST30 1063 aaKnown RBP6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms