RNA–Protein interactions for RNA: ENST00000476967.1

CNOT10-214, Transcript of CCR4-NOT transcription complex subunit 10, humanhuman

TSL 2

Gene CNOT10, Length 354 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT10-214ENST00000476967 AEBP2Q6ZN18 517 aaPredicted RBP14.08□□□□□ -0.16
CNOT10-214ENST00000476967 CHIC1Q5VXU3 224 aa13.02□□□□□ -0.33
CNOT10-214ENST00000476967 SENP3Q9H4L4 574 aaPredicted RBP11.94□□□□□ -0.5
CNOT10-214ENST00000476967 PHF23Q9BUL5 403 aaPredicted RBP11.8□□□□□ -0.52
CNOT10-214ENST00000476967 FOXD1Q16676 465 aa11.25□□□□□ -0.61
CNOT10-214ENST00000476967 POTEDQ86YR6 584 aa10.9□□□□□ -0.66
CNOT10-214ENST00000476967 MSH5O43196 834 aa10.55□□□□□ -0.72
CNOT10-214ENST00000476967 PIAS4Q8N2W9 510 aaPredicted RBP10.36□□□□□ -0.75
CNOT10-214ENST00000476967 PPP6R1Q9UPN7 881 aa10.32□□□□□ -0.76
CNOT10-214ENST00000476967 ADRA2BP18089 450 aa10.23□□□□□ -0.77
CNOT10-214ENST00000476967 PLPPR3Q6T4P5 718 aa10.2□□□□□ -0.78
CNOT10-214ENST00000476967 MAPK8IP2Q13387 824 aaPredicted RBP9.51□□□□□ -0.89
CNOT10-214ENST00000476967 DMRT2Q9Y5R5 561 aa9.47□□□□□ -0.89
CNOT10-214ENST00000476967 CACNB1Q02641 598 aaPredicted RBP9.24□□□□□ -0.93
CNOT10-214ENST00000476967 SCAF1Q9H7N4 1312 aaKnown RBP9.24□□□□□ -0.93
CNOT10-214ENST00000476967 RNF39Q9H2S5 420 aa9.03□□□□□ -0.96
CNOT10-214ENST00000476967 HOXD11P31277 338 aaPredicted RBP9.01□□□□□ -0.97
CNOT10-214ENST00000476967 DCAF8L1A6NGE4 600 aa9□□□□□ -0.97
CNOT10-214ENST00000476967 PPP4R3CPQ6ZMV5 832 aa8.94□□□□□ -0.98
CNOT10-214ENST00000476967 C1QBPQ07021 282 aaKnown RBP8.84□□□□□ -0.99
CNOT10-214ENST00000476967 RNF216Q9NWF9 866 aaPredicted RBP8.83□□□□□ -1
CNOT10-214ENST00000476967 CNKSR2Q8WXI2 1034 aa8.82□□□□□ -1
CNOT10-214ENST00000476967 DNAJC5BQ9UF47 199 aa8.74□□□□□ -1.01
CNOT10-214ENST00000476967 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.5□□□□□ -1.05
CNOT10-214ENST00000476967 POTEHQ6S545 545 aa8.45□□□□□ -1.06
CNOT10-214ENST00000476967 NCBP3Q53F19 620 aaKnown RBP8.42□□□□□ -1.06
CNOT10-214ENST00000476967 NPM3O75607 178 aaKnown RBP8.4□□□□□ -1.06
CNOT10-214ENST00000476967 U3KPZ7 1027 aaPredicted RBP8.38□□□□□ -1.07
CNOT10-214ENST00000476967 DSG3P32926 999 aa8.37□□□□□ -1.07
CNOT10-214ENST00000476967 SPINK5Q9NQ38 1064 aaPredicted RBP8.35□□□□□ -1.07
CNOT10-214ENST00000476967 CAPN15O75808 1086 aa8.26□□□□□ -1.09
CNOT10-214ENST00000476967 SLC4A2P04920 1241 aa8.14□□□□□ -1.11
CNOT10-214ENST00000476967 ABCB7O75027 752 aa8.08□□□□□ -1.12
CNOT10-214ENST00000476967 TRHP20396 242 aaPredicted RBP8.07□□□□□ -1.12
CNOT10-214ENST00000476967 NISCHQ9Y2I1 1504 aa8.04□□□□□ -1.12
CNOT10-214ENST00000476967 ZNF219Q9P2Y4 722 aaPredicted RBP8.02□□□□□ -1.13
CNOT10-214ENST00000476967 KCNA4P22459 653 aa7.98□□□□□ -1.13
CNOT10-214ENST00000476967 APLP2Q06481 763 aa7.95□□□□□ -1.14
CNOT10-214ENST00000476967 SLC24A1O60721 1099 aa7.92□□□□□ -1.14
CNOT10-214ENST00000476967 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.91□□□□□ -1.14
CNOT10-214ENST00000476967 HNRNPUL2Q1KMD3 747 aaKnown RBP7.91□□□□□ -1.14
CNOT10-214ENST00000476967 CHRDL2Q6WN34 429 aa7.89□□□□□ -1.15
CNOT10-214ENST00000476967 RBM42Q9BTD8 480 aaKnown RBP7.89□□□□□ -1.15
CNOT10-214ENST00000476967 SAMD1Q6SPF0 538 aaPredicted RBP7.87□□□□□ -1.15
CNOT10-214ENST00000476967 EHMT2Q96KQ7 1210 aa7.86□□□□□ -1.15
CNOT10-214ENST00000476967 POLA2Q14181 598 aa7.81□□□□□ -1.16
CNOT10-214ENST00000476967 ABCC9O60706 1549 aa7.78□□□□□ -1.16
CNOT10-214ENST00000476967 SP7Q8TDD2 431 aaPredicted RBP7.77□□□□□ -1.17
CNOT10-214ENST00000476967 MYCNP04198 464 aaPredicted RBP7.72□□□□□ -1.17
CNOT10-214ENST00000476967 AKT1S1Q96B36 256 aa7.69□□□□□ -1.18
CNOT10-214ENST00000476967 PIP4P2Q8N4L2 257 aa7.68□□□□□ -1.18
CNOT10-214ENST00000476967 ATF5Q9Y2D1 282 aaPredicted RBP7.67□□□□□ -1.18
CNOT10-214ENST00000476967 REM2Q8IYK8 340 aaPredicted RBP7.65□□□□□ -1.18
CNOT10-214ENST00000476967 FXR2P51116 673 aaKnown RBP eCLIP7.59□□□□□ -1.19
CNOT10-214ENST00000476967 PITPNM1O00562 1244 aa7.57□□□□□ -1.2
CNOT10-214ENST00000476967 OSCARQ8IYS5 282 aa7.57□□□□□ -1.2
CNOT10-214ENST00000476967 EVX2Q03828 476 aa7.56□□□□□ -1.2
CNOT10-214ENST00000476967 HAX1O00165 279 aa7.55□□□□□ -1.2
CNOT10-214ENST00000476967 ZBTB12Q9Y330 459 aaPredicted RBP7.55□□□□□ -1.2
CNOT10-214ENST00000476967 CSRNP3Q8WYN3 585 aa7.54□□□□□ -1.2
CNOT10-214ENST00000476967 FOXD4L1Q9NU39 408 aa7.48□□□□□ -1.21
CNOT10-214ENST00000476967 DNAJC5Q9H3Z4 198 aa7.45□□□□□ -1.22
CNOT10-214ENST00000476967 CCDC180Q9P1Z9 1646 aa7.43□□□□□ -1.22
CNOT10-214ENST00000476967 SLC4A1APQ9BWU0 796 aaKnown RBP7.4□□□□□ -1.22
CNOT10-214ENST00000476967 ZBTB22O15209 634 aa7.37□□□□□ -1.23
CNOT10-214ENST00000476967 AMER1Q5JTC6 1135 aaPredicted RBP7.36□□□□□ -1.23
CNOT10-214ENST00000476967 SPDYE2BA6NHP3 402 aa7.35□□□□□ -1.23
CNOT10-214ENST00000476967 C19orf67A6NJJ6 358 aa7.35□□□□□ -1.23
CNOT10-214ENST00000476967 SPDYE6P0CI01 402 aa7.35□□□□□ -1.23
CNOT10-214ENST00000476967 PRKAR2AP13861 404 aaKnown RBP7.35□□□□□ -1.23
CNOT10-214ENST00000476967 SPDYE2Q495Y8 402 aa7.35□□□□□ -1.23
CNOT10-214ENST00000476967 GABBR2O75899 941 aa7.32□□□□□ -1.24
CNOT10-214ENST00000476967 MKRN4PQ13434 485 aaPredicted RBP7.29□□□□□ -1.24
CNOT10-214ENST00000476967 RTN4Q9NQC3 1192 aaKnown RBP7.29□□□□□ -1.24
CNOT10-214ENST00000476967 ATXN8OSP0DMR3 200 aa7.28□□□□□ -1.24
CNOT10-214ENST00000476967 LHX8Q68G74 356 aa7.28□□□□□ -1.24
CNOT10-214ENST00000476967 RB1CC1Q8TDY2 1594 aa7.28□□□□□ -1.24
CNOT10-214ENST00000476967 SPDYE1Q8NFV5 336 aaPredicted RBP7.27□□□□□ -1.25
CNOT10-214ENST00000476967 CLEC11AQ9Y240 323 aa7.27□□□□□ -1.25
CNOT10-214ENST00000476967 SSUH2Q9Y2M2 353 aa7.26□□□□□ -1.25
CNOT10-214ENST00000476967 FBLN2P98095 1184 aa7.24□□□□□ -1.25
CNOT10-214ENST00000476967 CHADLQ6NUI6 762 aa7.22□□□□□ -1.25
CNOT10-214ENST00000476967 POTEIP0CG38 1075 aa7.21□□□□□ -1.26
CNOT10-214ENST00000476967 ZNF692Q9BU19 519 aaPredicted RBP7.19□□□□□ -1.26
CNOT10-214ENST00000476967 PABPN1Q86U42 306 aaKnown RBP eCLIP7.18□□□□□ -1.26
CNOT10-214ENST00000476967 NACADO15069 1562 aa7.14□□□□□ -1.27
CNOT10-214ENST00000476967 PRR29P0C7W0 189 aa7.11□□□□□ -1.27
CNOT10-214ENST00000476967 UNC13AQ9UPW8 1703 aa7.09□□□□□ -1.27
CNOT10-214ENST00000476967 CECR2Q9BXF3 1484 aa7.09□□□□□ -1.27
CNOT10-214ENST00000476967 CD44P16070 742 aaKnown RBP7.08□□□□□ -1.28
CNOT10-214ENST00000476967 FARP1Q9Y4F1 1045 aaPredicted RBP7.07□□□□□ -1.28
CNOT10-214ENST00000476967 CC2D2AQ9P2K1 1620 aa7.05□□□□□ -1.28
CNOT10-214ENST00000476967 BICRAQ9NZM4 1560 aa7.04□□□□□ -1.28
CNOT10-214ENST00000476967 DAXXQ9UER7 740 aaPredicted RBP7.03□□□□□ -1.28
CNOT10-214ENST00000476967 PLSCR2Q9NRY7 297 aa7.02□□□□□ -1.29
CNOT10-214ENST00000476967 CLCN6P51797 869 aa7.01□□□□□ -1.29
CNOT10-214ENST00000476967 SHROOM4Q9ULL8 1493 aa6.98□□□□□ -1.29
CNOT10-214ENST00000476967 ZNF579Q8NAF0 562 aaKnown RBP6.98□□□□□ -1.29
CNOT10-214ENST00000476967 POTEB2H3BUK9 544 aa6.97□□□□□ -1.29
CNOT10-214ENST00000476967 OTUD5Q96G74 571 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms