RNA–Protein interactions for RNA: ENST00000476646.5

NFIA-209, Transcript of nuclear factor I A, humanhuman

TSL 3

Gene NFIA, Length 730 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIA-209ENST00000476646 CADPSQ9ULU8 1353 aa7.12□□□□□ -1.27
NFIA-209ENST00000476646 GTPBP6O43824 516 aaPredicted RBP7.11□□□□□ -1.27
NFIA-209ENST00000476646 TSHZ2Q9NRE2 1034 aa7.11□□□□□ -1.27
NFIA-209ENST00000476646 RUSC2Q8N2Y8 1516 aa7.11□□□□□ -1.27
NFIA-209ENST00000476646 VSIG10Q8N0Z9 540 aa7.09□□□□□ -1.27
NFIA-209ENST00000476646 CUX1P39880 1505 aa7.09□□□□□ -1.27
NFIA-209ENST00000476646 LAMC3Q9Y6N6 1575 aa7.08□□□□□ -1.28
NFIA-209ENST00000476646 PPARGC1BQ86YN6 1023 aaKnown RBP7.08□□□□□ -1.28
NFIA-209ENST00000476646 CCER1Q8TC90 406 aaPredicted RBP7.08□□□□□ -1.28
NFIA-209ENST00000476646 FANCD2Q9BXW9 1451 aa7.07□□□□□ -1.28
NFIA-209ENST00000476646 MS4A3Q96HJ5 214 aa7.07□□□□□ -1.28
NFIA-209ENST00000476646 VPS8Q8N3P4 1428 aa7.07□□□□□ -1.28
NFIA-209ENST00000476646 RANGAP1P46060 587 aaPredicted RBP7.06□□□□□ -1.28
NFIA-209ENST00000476646 CABP2Q9NPB3 220 aa7.06□□□□□ -1.28
NFIA-209ENST00000476646 TRPC6Q9Y210 931 aa7.06□□□□□ -1.28
NFIA-209ENST00000476646 KDM2AQ9Y2K7 1162 aa7.06□□□□□ -1.28
NFIA-209ENST00000476646 DNMBPQ6XZF7 1577 aa7.06□□□□□ -1.28
NFIA-209ENST00000476646 RAPGEF2Q9Y4G8 1499 aa7.05□□□□□ -1.28
NFIA-209ENST00000476646 TTBK1Q5TCY1 1321 aaPredicted RBP7.05□□□□□ -1.28
NFIA-209ENST00000476646 PDS5BQ9NTI5 1447 aa7.05□□□□□ -1.28
NFIA-209ENST00000476646 EFCAB3Q8N7B9 438 aa7.05□□□□□ -1.28
NFIA-209ENST00000476646 GABBR2O75899 941 aa7.04□□□□□ -1.28
NFIA-209ENST00000476646 TMEM106CQ9BVX2 250 aa7.04□□□□□ -1.28
NFIA-209ENST00000476646 RYDENQ9NUL5 291 aaKnown RBP7.04□□□□□ -1.28
NFIA-209ENST00000476646 FGD5Q6ZNL6 1462 aa7.04□□□□□ -1.28
NFIA-209ENST00000476646 CUL7Q14999 1698 aa7.03□□□□□ -1.28
NFIA-209ENST00000476646 PRXQ9BXM0 1461 aa7.03□□□□□ -1.28
NFIA-209ENST00000476646 GALR2O43603 387 aaPredicted RBP7.02□□□□□ -1.29
NFIA-209ENST00000476646 MFRPQ9BY79 579 aa7.02□□□□□ -1.29
NFIA-209ENST00000476646 THOC2Q8NI27 1593 aaKnown RBP7.02□□□□□ -1.29
NFIA-209ENST00000476646 SOX12O15370 315 aa7.01□□□□□ -1.29
NFIA-209ENST00000476646 PHF8Q9UPP1 1060 aa7□□□□□ -1.29
NFIA-209ENST00000476646 CARMIL1Q5VZK9 1371 aa6.99□□□□□ -1.29
NFIA-209ENST00000476646 TIE1P35590 1138 aa6.99□□□□□ -1.29
NFIA-209ENST00000476646 GOLGA2Q08379 1002 aa6.99□□□□□ -1.29
NFIA-209ENST00000476646 TOPBP1Q92547 1522 aa6.99□□□□□ -1.29
NFIA-209ENST00000476646 CTTNBP2Q8WZ74 1663 aa6.99□□□□□ -1.29
NFIA-209ENST00000476646 TTLL13PA6NNM8 815 aa6.98□□□□□ -1.29
NFIA-209ENST00000476646 CLCN6P51797 869 aa6.98□□□□□ -1.29
NFIA-209ENST00000476646 NLRP6P59044 892 aa6.98□□□□□ -1.29
NFIA-209ENST00000476646 BMP2KQ9NSY1 1161 aaPredicted RBP6.98□□□□□ -1.29
NFIA-209ENST00000476646 FHAD1B1AJZ9 1412 aa6.98□□□□□ -1.29
NFIA-209ENST00000476646 ABCA10Q8WWZ4 1543 aa6.97□□□□□ -1.29
NFIA-209ENST00000476646 KIF21AQ7Z4S6 1674 aa6.97□□□□□ -1.29
NFIA-209ENST00000476646 FBXO22Q8NEZ5 403 aa6.97□□□□□ -1.29
NFIA-209ENST00000476646 EFCAB5A4FU69 1503 aa6.96□□□□□ -1.29
NFIA-209ENST00000476646 PPP1R37O75864 691 aa6.96□□□□□ -1.3
NFIA-209ENST00000476646 MKRN3Q13064 507 aaKnown RBP6.96□□□□□ -1.3
NFIA-209ENST00000476646 IGF1RP08069 1367 aa6.95□□□□□ -1.3
NFIA-209ENST00000476646 POLA1P09884 1462 aaPredicted RBP6.94□□□□□ -1.3
NFIA-209ENST00000476646 ATP1B4Q9UN42 357 aaPredicted RBP6.94□□□□□ -1.3
NFIA-209ENST00000476646 TRIM35Q9UPQ4 493 aa6.94□□□□□ -1.3
NFIA-209ENST00000476646 ARAP1Q96P48 1450 aa6.93□□□□□ -1.3
NFIA-209ENST00000476646 MS4A4AQ96JQ5 239 aa6.93□□□□□ -1.3
NFIA-209ENST00000476646 WDR97A6NE52 1622 aa6.93□□□□□ -1.3
NFIA-209ENST00000476646 ATN1P54259 1190 aaPredicted RBP6.92□□□□□ -1.3
NFIA-209ENST00000476646 LHX8Q68G74 356 aa6.92□□□□□ -1.3
NFIA-209ENST00000476646 CADPS2Q86UW7 1296 aa6.92□□□□□ -1.3
NFIA-209ENST00000476646 GAPVD1Q14C86 1478 aa6.92□□□□□ -1.3
NFIA-209ENST00000476646 MAP3K1Q13233 1512 aa6.91□□□□□ -1.3
NFIA-209ENST00000476646 PBRM1Q86U86 1689 aa6.91□□□□□ -1.3
NFIA-209ENST00000476646 ATMINO43313 823 aaPredicted RBP6.91□□□□□ -1.3
NFIA-209ENST00000476646 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.91□□□□□ -1.31e-7■■□□□ 12.3
NFIA-209ENST00000476646 FMN1Q68DA7 1419 aa6.91□□□□□ -1.3
NFIA-209ENST00000476646 ARHGAP35Q9NRY4 1499 aa6.91□□□□□ -1.3
NFIA-209ENST00000476646 MRC2Q9UBG0 1479 aa6.91□□□□□ -1.3
NFIA-209ENST00000476646 RAD54L2Q9Y4B4 1467 aa6.91□□□□□ -1.3
NFIA-209ENST00000476646 URB2Q14146 1524 aaKnown RBP6.91□□□□□ -1.3
NFIA-209ENST00000476646 ABCA5Q8WWZ7 1642 aa6.9□□□□□ -1.31
NFIA-209ENST00000476646 CFAP43Q8NDM7 1665 aa6.9□□□□□ -1.31
NFIA-209ENST00000476646 POTEIP0CG38 1075 aa6.89□□□□□ -1.31
NFIA-209ENST00000476646 ASTLQ6HA08 431 aaPredicted RBP6.89□□□□□ -1.31
NFIA-209ENST00000476646 BCANQ96GW7 911 aa6.89□□□□□ -1.31
NFIA-209ENST00000476646 TIAM1Q13009 1591 aa6.89□□□□□ -1.31
NFIA-209ENST00000476646 FYCO1Q9BQS8 1478 aa6.88□□□□□ -1.31
NFIA-209ENST00000476646 CLSPNQ9HAW4 1339 aa6.88□□□□□ -1.31
NFIA-209ENST00000476646 ILDR1Q86SU0 546 aaPredicted RBP6.88□□□□□ -1.31
NFIA-209ENST00000476646 CCNB3Q8WWL7 1395 aa6.87□□□□□ -1.31
NFIA-209ENST00000476646 DPY19L2Q6NUT2 758 aa6.87□□□□□ -1.31
NFIA-209ENST00000476646 DCBLD2Q96PD2 775 aa6.87□□□□□ -1.31
NFIA-209ENST00000476646 AQRO60306 1485 aaKnown RBP eCLIP6.86□□□□□ -1.311e-7■■□□□ 12.1
NFIA-209ENST00000476646 P3H3Q8IVL6 736 aa6.86□□□□□ -1.31
NFIA-209ENST00000476646 WDR70Q9NW82 654 aa6.86□□□□□ -1.31
NFIA-209ENST00000476646 PCF11O94913 1555 aaKnown RBP6.86□□□□□ -1.31
NFIA-209ENST00000476646 IFT140Q96RY7 1462 aa6.85□□□□□ -1.31
NFIA-209ENST00000476646 TDRD9Q8NDG6 1382 aaKnown RBP6.85□□□□□ -1.31
NFIA-209ENST00000476646 PELP1Q8IZL8 1130 aaKnown RBP6.85□□□□□ -1.31
NFIA-209ENST00000476646 GRIN2BQ13224 1484 aa6.85□□□□□ -1.31
NFIA-209ENST00000476646 CASKIN1Q8WXD9 1431 aa6.84□□□□□ -1.31
NFIA-209ENST00000476646 MTUS2Q5JR59 1369 aa6.84□□□□□ -1.31
NFIA-209ENST00000476646 TARBP1Q13395 1621 aaKnown RBP6.84□□□□□ -1.31
NFIA-209ENST00000476646 ITGAEP38570 1179 aa6.84□□□□□ -1.31
NFIA-209ENST00000476646 IRX5P78411 483 aaPredicted RBP6.84□□□□□ -1.31
NFIA-209ENST00000476646 FAM50AQ14320 339 aaKnown RBP6.84□□□□□ -1.31
NFIA-209ENST00000476646 OCEL1Q9H607 264 aa6.84□□□□□ -1.31
NFIA-209ENST00000476646 CCDC18Q5T9S5 1454 aa6.84□□□□□ -1.31
NFIA-209ENST00000476646 LRRC9Q6ZRR7 1453 aa6.84□□□□□ -1.31
NFIA-209ENST00000476646 RRBP1Q9P2E9 1410 aaKnown RBP6.84□□□□□ -1.32
NFIA-209ENST00000476646 RIMBP3CA6NJZ7 1639 aa6.83□□□□□ -1.32
NFIA-209ENST00000476646 RIMBP3BA6NNM3 1639 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms