RNA–Protein interactions for RNA: ENST00000475716.5

SNX5-208, Transcript of sorting nexin 5, humanhuman

TSL 3

Gene SNX5, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-208ENST00000475716 HECW1Q76N89 1606 aa16.95■□□□□ 0.3
SNX5-208ENST00000475716 ZMYM4Q5VZL5 1548 aa16.95■□□□□ 0.3
SNX5-208ENST00000475716 EFCAB5A4FU69 1503 aa16.94■□□□□ 0.3
SNX5-208ENST00000475716 ATP10AO60312 1499 aa16.93■□□□□ 0.3
SNX5-208ENST00000475716 TTC37Q6PGP7 1564 aa16.92■□□□□ 0.3
SNX5-208ENST00000475716 PLCH2O75038 1416 aa16.91■□□□□ 0.3
SNX5-208ENST00000475716 ARHGEF12Q9NZN5 1544 aa16.91■□□□□ 0.3
SNX5-208ENST00000475716 FER1L4A9Z1Z3 1794 aa16.9■□□□□ 0.3
SNX5-208ENST00000475716 STRCQ7RTU9 1775 aa16.89■□□□□ 0.3
SNX5-208ENST00000475716 EFCAB2Q5VUJ9 269 aa16.89■□□□□ 0.29
SNX5-208ENST00000475716 AFAP1Q8N556 730 aa16.89■□□□□ 0.29
SNX5-208ENST00000475716 CFAP74Q9C0B2 1584 aa16.89■□□□□ 0.29
SNX5-208ENST00000475716 ATP1B4Q9UN42 357 aaPredicted RBP16.87■□□□□ 0.29
SNX5-208ENST00000475716 C9orf84Q5VXU9 1444 aa16.87■□□□□ 0.29
SNX5-208ENST00000475716 CDK13Q14004 1512 aaKnown RBP16.86■□□□□ 0.29
SNX5-208ENST00000475716 MYT1LQ9UL68 1186 aa16.85■□□□□ 0.29
SNX5-208ENST00000475716 UHRF1BP1Q6BDS2 1440 aa16.85■□□□□ 0.29
SNX5-208ENST00000475716 PREX1Q8TCU6 1659 aa16.85■□□□□ 0.29
SNX5-208ENST00000475716 PTPRTO14522 1441 aa16.83■□□□□ 0.28
SNX5-208ENST00000475716 SPATA31D1Q6ZQQ2 1576 aa16.81■□□□□ 0.28
SNX5-208ENST00000475716 LTBP4Q8N2S1 1624 aa16.79■□□□□ 0.28
SNX5-208ENST00000475716 EHMT2Q96KQ7 1210 aa16.78■□□□□ 0.28
SNX5-208ENST00000475716 SETD1BQ9UPS6 1966 aaKnown RBP16.77■□□□□ 0.28
SNX5-208ENST00000475716 ESF1Q9H501 851 aaKnown RBP16.76■□□□□ 0.27
SNX5-208ENST00000475716 NCKAP5LQ9HCH0 1330 aa16.74■□□□□ 0.27
SNX5-208ENST00000475716 TRAPPC8Q9Y2L5 1435 aa16.74■□□□□ 0.27
SNX5-208ENST00000475716 CDK11AQ9UQ88 783 aaPredicted RBP16.74■□□□□ 0.27
SNX5-208ENST00000475716 ZNF518AQ6AHZ1 1483 aa16.73■□□□□ 0.27
SNX5-208ENST00000475716 UBAP1LF5GYI3 381 aa16.73■□□□□ 0.27
SNX5-208ENST00000475716 ZNF335Q9H4Z2 1342 aaPredicted RBP16.71■□□□□ 0.27
SNX5-208ENST00000475716 NCOA1Q15788 1441 aa16.71■□□□□ 0.27
SNX5-208ENST00000475716 C3P01024 1663 aa16.7■□□□□ 0.26
SNX5-208ENST00000475716 DIP2CQ9Y2E4 1556 aa16.7■□□□□ 0.26
SNX5-208ENST00000475716 KIF14Q15058 1648 aa16.7■□□□□ 0.26
SNX5-208ENST00000475716 ARHGAP5Q13017 1502 aa16.7■□□□□ 0.26
SNX5-208ENST00000475716 KDM5CP41229 1560 aa16.69■□□□□ 0.26
SNX5-208ENST00000475716 MYO5CQ9NQX4 1742 aa16.67■□□□□ 0.26
SNX5-208ENST00000475716 IQSEC2Q5JU85 1478 aa16.67■□□□□ 0.26
SNX5-208ENST00000475716 MLH3Q9UHC1 1453 aa16.67■□□□□ 0.26
SNX5-208ENST00000475716 UBTFP17480 764 aaKnown RBP16.67■□□□□ 0.26
SNX5-208ENST00000475716 TROQ12816 1431 aaPredicted RBP16.67■□□□□ 0.26
SNX5-208ENST00000475716 EEA1Q15075 1411 aa16.67■□□□□ 0.26
SNX5-208ENST00000475716 ABCA6Q8N139 1617 aa16.65■□□□□ 0.26
SNX5-208ENST00000475716 ZMYM3Q14202 1370 aa16.64■□□□□ 0.26
SNX5-208ENST00000475716 CAMSAP1Q5T5Y3 1602 aa16.64■□□□□ 0.25
SNX5-208ENST00000475716 AGLP35573 1532 aa16.64■□□□□ 0.25
SNX5-208ENST00000475716 REREQ9P2R6 1566 aa16.64■□□□□ 0.25
SNX5-208ENST00000475716 FMN1Q68DA7 1419 aa16.63■□□□□ 0.25
SNX5-208ENST00000475716 ARHGAP35Q9NRY4 1499 aa16.61■□□□□ 0.25
SNX5-208ENST00000475716 HSPA1LP34931 641 aa16.61■□□□□ 0.25
SNX5-208ENST00000475716 CNTLNQ9NXG0 1405 aa16.61■□□□□ 0.25
SNX5-208ENST00000475716 ZNF777Q9ULD5 760 aaPredicted RBP16.6■□□□□ 0.25
SNX5-208ENST00000475716 CLIP1P30622 1438 aa16.6■□□□□ 0.25
SNX5-208ENST00000475716 PKD2Q13563 968 aa16.59■□□□□ 0.25
SNX5-208ENST00000475716 CDC42BPBQ9Y5S2 1711 aa16.59■□□□□ 0.25
SNX5-208ENST00000475716 HNRNPMP52272 730 aaKnown RBP eCLIP16.58■□□□□ 0.241e-21■□□□□ 8.7
SNX5-208ENST00000475716 PIP4K2BP78356 416 aa16.58■□□□□ 0.24
SNX5-208ENST00000475716 SCAF1Q9H7N4 1312 aaKnown RBP16.58■□□□□ 0.24
SNX5-208ENST00000475716 NPATQ14207 1427 aa16.58■□□□□ 0.24
SNX5-208ENST00000475716 KIDINS220Q9ULH0 1771 aa16.56■□□□□ 0.24
SNX5-208ENST00000475716 GGT6Q6P531 493 aa16.55■□□□□ 0.24
SNX5-208ENST00000475716 ABCC1P33527 1531 aa16.55■□□□□ 0.24
SNX5-208ENST00000475716 SPAG9O60271 1321 aaKnown RBP16.54■□□□□ 0.24
SNX5-208ENST00000475716 PPP6R1Q9UPN7 881 aa16.54■□□□□ 0.24
SNX5-208ENST00000475716 PTPRKQ15262 1439 aa16.52■□□□□ 0.23
SNX5-208ENST00000475716 LRRIQ1Q96JM4 1722 aa16.51■□□□□ 0.23
SNX5-208ENST00000475716 TCOF1Q13428 1488 aaKnown RBP16.51■□□□□ 0.23
SNX5-208ENST00000475716 ITSN2Q9NZM3 1697 aa16.5■□□□□ 0.23
SNX5-208ENST00000475716 PLA2R1Q13018 1463 aa16.49■□□□□ 0.23
SNX5-208ENST00000475716 TOM1O60784 492 aa16.49■□□□□ 0.23
SNX5-208ENST00000475716 SAMD9LQ8IVG5 1584 aa16.49■□□□□ 0.23
SNX5-208ENST00000475716 PREX2Q70Z35 1606 aa16.48■□□□□ 0.23
SNX5-208ENST00000475716 SUPT6HQ7KZ85 1726 aaKnown RBP16.47■□□□□ 0.23
SNX5-208ENST00000475716 MED1Q15648 1581 aaPredicted RBP16.47■□□□□ 0.23
SNX5-208ENST00000475716 MROH2AA6NES4 1674 aa16.46■□□□□ 0.23
SNX5-208ENST00000475716 FBXO31Q5XUX0 539 aaPredicted RBP16.46■□□□□ 0.23
SNX5-208ENST00000475716 SENP3Q9H4L4 574 aaPredicted RBP16.46■□□□□ 0.23
SNX5-208ENST00000475716 CLTCQ00610 1675 aaKnown RBP16.46■□□□□ 0.23
SNX5-208ENST00000475716 CEP170BQ9Y4F5 1589 aaPredicted RBP16.45■□□□□ 0.22
SNX5-208ENST00000475716 PHF23Q9BUL5 403 aaPredicted RBP16.44■□□□□ 0.22
SNX5-208ENST00000475716 MYO3AQ8NEV4 1616 aa16.44■□□□□ 0.22
SNX5-208ENST00000475716 GPATCH8Q9UKJ3 1502 aaKnown RBP16.44■□□□□ 0.22
SNX5-208ENST00000475716 CASKIN1Q8WXD9 1431 aa16.44■□□□□ 0.22
SNX5-208ENST00000475716 A2MP01023 1474 aa16.43■□□□□ 0.22
SNX5-208ENST00000475716 CFDP1Q9UEE9 299 aaPredicted RBP16.43■□□□□ 0.22
SNX5-208ENST00000475716 SYCP2Q9BX26 1530 aa16.43■□□□□ 0.22
SNX5-208ENST00000475716 CDC42BPAQ5VT25 1732 aa16.42■□□□□ 0.22
SNX5-208ENST00000475716 ZNF644Q9H582 1327 aaPredicted RBP16.41■□□□□ 0.22
SNX5-208ENST00000475716 A2ML1A8K2U0 1454 aa16.41■□□□□ 0.22
SNX5-208ENST00000475716 SHANK2Q9UPX8 1470 aa16.41■□□□□ 0.22
SNX5-208ENST00000475716 ZNF142P52746 1687 aaPredicted RBP16.4■□□□□ 0.22
SNX5-208ENST00000475716 CCDC18Q5T9S5 1454 aa16.4■□□□□ 0.22
SNX5-208ENST00000475716 ATP7AQ04656 1500 aa16.4■□□□□ 0.22
SNX5-208ENST00000475716 DNMT1P26358 1616 aaKnown RBP16.38■□□□□ 0.21
SNX5-208ENST00000475716 KIAA1107Q9UPP5 1409 aa16.38■□□□□ 0.21
SNX5-208ENST00000475716 ANKLE2Q86XL3 938 aa16.38■□□□□ 0.21
SNX5-208ENST00000475716 PLXNC1O60486 1568 aa16.38■□□□□ 0.21
SNX5-208ENST00000475716 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.37■□□□□ 0.21
SNX5-208ENST00000475716 CPS1P31327 1500 aa16.35■□□□□ 0.21
SNX5-208ENST00000475716 RGS17Q9UGC6 210 aaPredicted RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms