RNA–Protein interactions for RNA: ENST00000474839.5

SKIV2L-208, Transcript of Ski2 like RNA helicase, humanhuman

TSL 2

Gene SKIV2L, Length 3,378 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIV2L-208ENST00000474839 RTL5Q5HYW3 569 aaPredicted RBP16.35■□□□□ 0.21
SKIV2L-208ENST00000474839 ZNF644Q9H582 1327 aaPredicted RBP16.35■□□□□ 0.21
SKIV2L-208ENST00000474839 ANO8Q9HCE9 1232 aaPredicted RBP16.35■□□□□ 0.21
SKIV2L-208ENST00000474839 FYCO1Q9BQS8 1478 aa16.34■□□□□ 0.21
SKIV2L-208ENST00000474839 KIF7Q2M1P5 1343 aa16.34■□□□□ 0.21
SKIV2L-208ENST00000474839 CCDC7Q96M83 1385 aa16.34■□□□□ 0.21
SKIV2L-208ENST00000474839 AKNAQ7Z591 1439 aa16.34■□□□□ 0.21
SKIV2L-208ENST00000474839 MYOM3Q5VTT5 1437 aa16.33■□□□□ 0.2
SKIV2L-208ENST00000474839 DAXXQ9UER7 740 aaPredicted RBP16.33■□□□□ 0.2
SKIV2L-208ENST00000474839 TARBP1Q13395 1621 aaKnown RBP16.32■□□□□ 0.2
SKIV2L-208ENST00000474839 ZBED9Q6R2W3 1325 aa16.32■□□□□ 0.2
SKIV2L-208ENST00000474839 IFT140Q96RY7 1462 aa16.32■□□□□ 0.2
SKIV2L-208ENST00000474839 ZBTB47Q9UFB7 747 aaPredicted RBP16.32■□□□□ 0.2
SKIV2L-208ENST00000474839 CNTLNQ9NXG0 1405 aa16.32■□□□□ 0.2
SKIV2L-208ENST00000474839 GRIN2BQ13224 1484 aa16.3■□□□□ 0.2
SKIV2L-208ENST00000474839 WDR62O43379 1518 aa16.3■□□□□ 0.2
SKIV2L-208ENST00000474839 RTN4Q9NQC3 1192 aaKnown RBP16.29■□□□□ 0.2
SKIV2L-208ENST00000474839 LAS1LQ9Y4W2 734 aaKnown RBP16.28■□□□□ 0.2
SKIV2L-208ENST00000474839 PTPN23Q9H3S7 1636 aa16.28■□□□□ 0.2
SKIV2L-208ENST00000474839 ERICH6BQ5W0A0 696 aa16.28■□□□□ 0.2
SKIV2L-208ENST00000474839 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.27■□□□□ 0.19
SKIV2L-208ENST00000474839 JPH4Q96JJ6 628 aa16.25■□□□□ 0.19
SKIV2L-208ENST00000474839 PLEKHG5O94827 1062 aa16.25■□□□□ 0.19
SKIV2L-208ENST00000474839 THOC2Q8NI27 1593 aaKnown RBP16.25■□□□□ 0.19
SKIV2L-208ENST00000474839 NUDCQ9Y266 331 aa16.24■□□□□ 0.19
SKIV2L-208ENST00000474839 ABCA5Q8WWZ7 1642 aa16.24■□□□□ 0.19
SKIV2L-208ENST00000474839 CFAP43Q8NDM7 1665 aa16.23■□□□□ 0.19
SKIV2L-208ENST00000474839 EIF4G3O43432 1585 aaKnown RBP16.23■□□□□ 0.19
SKIV2L-208ENST00000474839 CARD11Q9BXL7 1154 aa16.21■□□□□ 0.19
SKIV2L-208ENST00000474839 PKD2Q13563 968 aa16.21■□□□□ 0.18
SKIV2L-208ENST00000474839 IPO9Q96P70 1041 aaKnown RBP16.2■□□□□ 0.18
SKIV2L-208ENST00000474839 SKAP1Q86WV1 359 aa16.2■□□□□ 0.18
SKIV2L-208ENST00000474839 EXOC6Q8TAG9 804 aa16.19■□□□□ 0.18
SKIV2L-208ENST00000474839 CFDP1Q9UEE9 299 aaPredicted RBP16.17■□□□□ 0.18
SKIV2L-208ENST00000474839 PLIN1O60240 522 aa16.17■□□□□ 0.18
SKIV2L-208ENST00000474839 RGL3Q3MIN7 710 aa16.17■□□□□ 0.18
SKIV2L-208ENST00000474839 EFCAB5A4FU69 1503 aa16.17■□□□□ 0.18
SKIV2L-208ENST00000474839 NCOA1Q15788 1441 aa16.17■□□□□ 0.18
SKIV2L-208ENST00000474839 MYT1LQ9UL68 1186 aa16.15■□□□□ 0.18
SKIV2L-208ENST00000474839 ST20-MTHFSA0A0A6YYL1 179 aa16.14■□□□□ 0.17
SKIV2L-208ENST00000474839 DCAF11Q8TEB1 546 aa16.14■□□□□ 0.17
SKIV2L-208ENST00000474839 KDM6BO15054 1643 aa16.14■□□□□ 0.17
SKIV2L-208ENST00000474839 GRIN2AQ12879 1464 aa16.14■□□□□ 0.17
SKIV2L-208ENST00000474839 PBRM1Q86U86 1689 aa16.14■□□□□ 0.17
SKIV2L-208ENST00000474839 USP47Q96K76 1375 aa16.14■□□□□ 0.17
SKIV2L-208ENST00000474839 CDK13Q14004 1512 aaKnown RBP16.13■□□□□ 0.17
SKIV2L-208ENST00000474839 KDM5BQ9UGL1 1544 aa16.13■□□□□ 0.17
SKIV2L-208ENST00000474839 CUL7Q14999 1698 aa16.13■□□□□ 0.17
SKIV2L-208ENST00000474839 NEFMP07197 916 aa16.13■□□□□ 0.17
SKIV2L-208ENST00000474839 CC2D1BQ5T0F9 858 aaKnown RBP16.12■□□□□ 0.17
SKIV2L-208ENST00000474839 ANKRD30BQ9BXX2 1392 aa16.12■□□□□ 0.17
SKIV2L-208ENST00000474839 PNISRQ8TF01 805 aaKnown RBP16.11■□□□□ 0.17
SKIV2L-208ENST00000474839 DENND4BO75064 1496 aaPredicted RBP16.11■□□□□ 0.17
SKIV2L-208ENST00000474839 ADAMTS12P58397 1594 aa16.1■□□□□ 0.17
SKIV2L-208ENST00000474839 CDCA7LQ96GN5 454 aa16.1■□□□□ 0.17
SKIV2L-208ENST00000474839 MAGI3Q5TCQ9 1506 aa16.09■□□□□ 0.17
SKIV2L-208ENST00000474839 RCAN3Q9UKA8 241 aa16.09■□□□□ 0.17
SKIV2L-208ENST00000474839 SUPT6HQ7KZ85 1726 aaKnown RBP16.09■□□□□ 0.17
SKIV2L-208ENST00000474839 SLC4A3P48751 1232 aa16.09■□□□□ 0.17
SKIV2L-208ENST00000474839 IL27Q8NEV9 243 aa16.09■□□□□ 0.17
SKIV2L-208ENST00000474839 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.09■□□□□ 0.175e-7■■■□□ 17.1
SKIV2L-208ENST00000474839 SYNJ2O15056 1496 aa16.08■□□□□ 0.16
SKIV2L-208ENST00000474839 UBE2Q2Q8WVN8 375 aa16.07■□□□□ 0.16
SKIV2L-208ENST00000474839 PDE4AP27815 886 aa16.06■□□□□ 0.16
SKIV2L-208ENST00000474839 RRP1P56182 461 aaKnown RBP16.06■□□□□ 0.16
SKIV2L-208ENST00000474839 SMG6Q86US8 1419 aaKnown RBP16.06■□□□□ 0.16
SKIV2L-208ENST00000474839 EHBP1L1Q8N3D4 1523 aa16.06■□□□□ 0.16
SKIV2L-208ENST00000474839 IQGAP2Q13576 1575 aa16.05■□□□□ 0.16
SKIV2L-208ENST00000474839 UGGT2Q9NYU1 1516 aa16.03■□□□□ 0.16
SKIV2L-208ENST00000474839 PLB1Q6P1J6 1458 aa16.03■□□□□ 0.16
SKIV2L-208ENST00000474839 NUP155O75694 1391 aa16.02■□□□□ 0.16
SKIV2L-208ENST00000474839 MAGI1Q96QZ7 1491 aaPredicted RBP16.02■□□□□ 0.16
SKIV2L-208ENST00000474839 EPRSP07814 1512 aaKnown RBP16.02■□□□□ 0.16
SKIV2L-208ENST00000474839 PRG4Q92954 1404 aaPredicted RBP16.02■□□□□ 0.15
SKIV2L-208ENST00000474839 RPRD2Q5VT52 1461 aaKnown RBP16.02■□□□□ 0.15
SKIV2L-208ENST00000474839 KIAA0586Q9BVV6 1533 aa16.01■□□□□ 0.15
SKIV2L-208ENST00000474839 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.01■□□□□ 0.15
SKIV2L-208ENST00000474839 DHX29Q7Z478 1369 aaKnown RBP16.01■□□□□ 0.15
SKIV2L-208ENST00000474839 DAPK1P53355 1430 aa16.01■□□□□ 0.15
SKIV2L-208ENST00000474839 CEP170Q5SW79 1584 aa16■□□□□ 0.15
SKIV2L-208ENST00000474839 CTTNBP2Q8WZ74 1663 aa16■□□□□ 0.15
SKIV2L-208ENST00000474839 ABCC5O15440 1437 aa16■□□□□ 0.15
SKIV2L-208ENST00000474839 TSPY4P0CV99 314 aa15.99■□□□□ 0.15
SKIV2L-208ENST00000474839 TSPY10P0CW01 314 aa15.99■□□□□ 0.15
SKIV2L-208ENST00000474839 HNRNPMP52272 730 aaKnown RBP eCLIP15.97■□□□□ 0.15
SKIV2L-208ENST00000474839 CRBNQ96SW2 442 aa15.97■□□□□ 0.15
SKIV2L-208ENST00000474839 MYBBP1AQ9BQG0 1328 aaKnown RBP15.97■□□□□ 0.15
SKIV2L-208ENST00000474839 SPATA31E1Q6ZUB1 1445 aa15.97■□□□□ 0.15
SKIV2L-208ENST00000474839 RGS3P49796 1198 aa15.96■□□□□ 0.15
SKIV2L-208ENST00000474839 TCERG1O14776 1098 aaKnown RBP15.96■□□□□ 0.15
SKIV2L-208ENST00000474839 LRRIQ1Q96JM4 1722 aa15.96■□□□□ 0.14
SKIV2L-208ENST00000474839 NBPF1Q3BBV0 1214 aa15.95■□□□□ 0.14
SKIV2L-208ENST00000474839 DISP1Q96F81 1524 aa15.95■□□□□ 0.14
SKIV2L-208ENST00000474839 ROCK2O75116 1388 aaKnown RBP15.95■□□□□ 0.14
SKIV2L-208ENST00000474839 KIF15Q9NS87 1388 aa15.95■□□□□ 0.14
SKIV2L-208ENST00000474839 MIA2Q96PC5 1412 aa15.94■□□□□ 0.14
SKIV2L-208ENST00000474839 CARMIL2Q6F5E8 1435 aa15.94■□□□□ 0.14
SKIV2L-208ENST00000474839 TEX14Q8IWB6 1497 aa15.94■□□□□ 0.14
SKIV2L-208ENST00000474839 PTPRGP23470 1445 aa15.94■□□□□ 0.14
SKIV2L-208ENST00000474839 RALBP1Q15311 655 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 231.9 ms