RNA–Protein interactions for RNA: ENST00000468531.1

PTP4A2-202, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 3

Gene PTP4A2, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-202ENST00000468531 MKRN3Q13064 507 aaKnown RBP11.33□□□□□ -0.6
PTP4A2-202ENST00000468531 PDCD7Q8N8D1 485 aaKnown RBP11.32□□□□□ -0.6
PTP4A2-202ENST00000468531 ILDR1Q86SU0 546 aaPredicted RBP11.3□□□□□ -0.6
PTP4A2-202ENST00000468531 EMP3P54852 163 aa11.29□□□□□ -0.6
PTP4A2-202ENST00000468531 C3orf67Q6ZVT6 689 aa11.28□□□□□ -0.6
PTP4A2-202ENST00000468531 EFCAB3Q8N7B9 438 aa11.28□□□□□ -0.6
PTP4A2-202ENST00000468531 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.28□□□□□ -0.6
PTP4A2-202ENST00000468531 RSF1Q96T23 1441 aaPredicted RBP11.26□□□□□ -0.61
PTP4A2-202ENST00000468531 L3MBTL3Q96JM7 780 aaPredicted RBP11.26□□□□□ -0.61
PTP4A2-202ENST00000468531 BCL11BQ9C0K0 894 aaPredicted RBP11.25□□□□□ -0.61
PTP4A2-202ENST00000468531 TAOK2Q9UL54 1235 aa11.23□□□□□ -0.61
PTP4A2-202ENST00000468531 NESP48681 1621 aa11.23□□□□□ -0.61
PTP4A2-202ENST00000468531 DPY19L2Q6NUT2 758 aa11.21□□□□□ -0.61
PTP4A2-202ENST00000468531 TOP2AP11388 1531 aaKnown RBP11.2□□□□□ -0.62
PTP4A2-202ENST00000468531 FAM205CA6NFA0 338 aa11.2□□□□□ -0.62
PTP4A2-202ENST00000468531 STK25O00506 426 aa11.2□□□□□ -0.62
PTP4A2-202ENST00000468531 HS3ST6Q96QI5 342 aa11.2□□□□□ -0.62
PTP4A2-202ENST00000468531 STK24Q9Y6E0 443 aa11.2□□□□□ -0.62
PTP4A2-202ENST00000468531 ERCC6Q03468 1493 aa11.19□□□□□ -0.62
PTP4A2-202ENST00000468531 KRTAP3-3Q9BYR6 98 aa11.18□□□□□ -0.62
PTP4A2-202ENST00000468531 KRTAP3-2Q9BYR7 98 aa11.18□□□□□ -0.62
PTP4A2-202ENST00000468531 LAMC3Q9Y6N6 1575 aa11.18□□□□□ -0.62
PTP4A2-202ENST00000468531 KIF21AQ7Z4S6 1674 aa11.17□□□□□ -0.62
PTP4A2-202ENST00000468531 SOX12O15370 315 aa11.16□□□□□ -0.62
PTP4A2-202ENST00000468531 PHF8Q9UPP1 1060 aa11.16□□□□□ -0.62
PTP4A2-202ENST00000468531 POTEB3A0JP26 581 aa11.15□□□□□ -0.62
PTP4A2-202ENST00000468531 POTEBQ6S5H4 581 aa11.15□□□□□ -0.62
PTP4A2-202ENST00000468531 MS4A4AQ96JQ5 239 aa11.15□□□□□ -0.62
PTP4A2-202ENST00000468531 MFRPQ9BY79 579 aa11.12□□□□□ -0.63
PTP4A2-202ENST00000468531 PRDM2Q13029 1718 aa11.12□□□□□ -0.63
PTP4A2-202ENST00000468531 FBXO22Q8NEZ5 403 aa11.11□□□□□ -0.63
PTP4A2-202ENST00000468531 HS6ST3Q8IZP7 471 aa11.1□□□□□ -0.63
PTP4A2-202ENST00000468531 BOLA1Q9Y3E2 137 aa11.1□□□□□ -0.63
PTP4A2-202ENST00000468531 CADPSQ9ULU8 1353 aa11.1□□□□□ -0.63
PTP4A2-202ENST00000468531 PDS5BQ9NTI5 1447 aa11.08□□□□□ -0.64
PTP4A2-202ENST00000468531 THOC2Q8NI27 1593 aaKnown RBP11.07□□□□□ -0.64
PTP4A2-202ENST00000468531 NLRP6P59044 892 aa11.07□□□□□ -0.64
PTP4A2-202ENST00000468531 CCDC88BA6NC98 1476 aa11.06□□□□□ -0.64
PTP4A2-202ENST00000468531 G3V3G9 751 aa11.06□□□□□ -0.64
PTP4A2-202ENST00000468531 CHGAP10645 457 aaKnown RBP11.05□□□□□ -0.64
PTP4A2-202ENST00000468531 CUX2O14529 1486 aa11.05□□□□□ -0.64
PTP4A2-202ENST00000468531 MICALL2Q8IY33 904 aa11.04□□□□□ -0.64
PTP4A2-202ENST00000468531 SUPT5HO00267 1087 aaKnown RBP11.03□□□□□ -0.64
PTP4A2-202ENST00000468531 CFTRP13569 1480 aa11.02□□□□□ -0.65
PTP4A2-202ENST00000468531 ZNF710Q8N1W2 664 aa11.02□□□□□ -0.65
PTP4A2-202ENST00000468531 RTN4Q9NQC3 1192 aaKnown RBP11.01□□□□□ -0.65
PTP4A2-202ENST00000468531 FANCD2Q9BXW9 1451 aa11□□□□□ -0.65
PTP4A2-202ENST00000468531 CEP164Q9UPV0 1460 aa11□□□□□ -0.65
PTP4A2-202ENST00000468531 DNAJC5Q9H3Z4 198 aa11□□□□□ -0.65
PTP4A2-202ENST00000468531 HOXB3P14651 431 aaPredicted RBP10.99□□□□□ -0.65
PTP4A2-202ENST00000468531 HOXB1P14653 301 aaPredicted RBP10.99□□□□□ -0.65
PTP4A2-202ENST00000468531 NKX1-1Q15270 411 aaPredicted RBP10.99□□□□□ -0.65
PTP4A2-202ENST00000468531 AMER1Q5JTC6 1135 aaPredicted RBP10.99□□□□□ -0.65
PTP4A2-202ENST00000468531 ERBB3P21860 1342 aa10.98□□□□□ -0.65
PTP4A2-202ENST00000468531 MRC2Q9UBG0 1479 aa10.98□□□□□ -0.65
PTP4A2-202ENST00000468531 DOK7Q18PE1 504 aa10.97□□□□□ -0.65
PTP4A2-202ENST00000468531 RNF166Q96A37 237 aaPredicted RBP10.97□□□□□ -0.65
PTP4A2-202ENST00000468531 TMEM92Q6UXU6 159 aa10.96□□□□□ -0.65
PTP4A2-202ENST00000468531 PPP1R37O75864 691 aa10.95□□□□□ -0.66
PTP4A2-202ENST00000468531 WDR62O43379 1518 aa10.94□□□□□ -0.66
PTP4A2-202ENST00000468531 RIMBP2O15034 1052 aa10.92□□□□□ -0.66
PTP4A2-202ENST00000468531 URB2Q14146 1524 aaKnown RBP10.9□□□□□ -0.66
PTP4A2-202ENST00000468531 MYT1LQ9UL68 1186 aa10.9□□□□□ -0.66
PTP4A2-202ENST00000468531 VARS2Q5ST30 1063 aaKnown RBP10.87□□□□□ -0.67
PTP4A2-202ENST00000468531 TOPBP1Q92547 1522 aa10.84□□□□□ -0.67
PTP4A2-202ENST00000468531 KIF3CO14782 793 aa10.83□□□□□ -0.68
PTP4A2-202ENST00000468531 DNMBPQ6XZF7 1577 aa10.82□□□□□ -0.68
PTP4A2-202ENST00000468531 GTPBP6O43824 516 aaPredicted RBP10.82□□□□□ -0.68
PTP4A2-202ENST00000468531 ZSWIM6Q9HCJ5 1215 aa10.82□□□□□ -0.68
PTP4A2-202ENST00000468531 PTGER2P43116 358 aa10.81□□□□□ -0.68
PTP4A2-202ENST00000468531 ZNF687Q8N1G0 1237 aa10.81□□□□□ -0.68
PTP4A2-202ENST00000468531 ABCC8Q09428 1581 aa10.81□□□□□ -0.68
PTP4A2-202ENST00000468531 C2orf72A6NCS6 295 aa10.8□□□□□ -0.68
PTP4A2-202ENST00000468531 RYDENQ9NUL5 291 aaKnown RBP10.79□□□□□ -0.68
PTP4A2-202ENST00000468531 IFT140Q96RY7 1462 aa10.74□□□□□ -0.69
PTP4A2-202ENST00000468531 CUX1P39880 1505 aa10.74□□□□□ -0.69
PTP4A2-202ENST00000468531 TMC2Q8TDI7 906 aa10.74□□□□□ -0.69
PTP4A2-202ENST00000468531 TARBP1Q13395 1621 aaKnown RBP10.73□□□□□ -0.69
PTP4A2-202ENST00000468531 POLA1P09884 1462 aaPredicted RBP10.73□□□□□ -0.69
PTP4A2-202ENST00000468531 ZNF608Q9ULD9 1512 aaPredicted RBP10.73□□□□□ -0.69
PTP4A2-202ENST00000468531 GPR153Q6NV75 609 aa10.72□□□□□ -0.69
PTP4A2-202ENST00000468531 BBXQ8WY36 941 aaPredicted RBP10.72□□□□□ -0.69
PTP4A2-202ENST00000468531 EIF4G3O43432 1585 aaKnown RBP10.72□□□□□ -0.69
PTP4A2-202ENST00000468531 FGD5Q6ZNL6 1462 aa10.71□□□□□ -0.69
PTP4A2-202ENST00000468531 ANKRD13DQ6ZTN6 518 aa10.71□□□□□ -0.69
PTP4A2-202ENST00000468531 RAD54L2Q9Y4B4 1467 aa10.7□□□□□ -0.7
PTP4A2-202ENST00000468531 SOGA1O94964 1423 aa10.69□□□□□ -0.7
PTP4A2-202ENST00000468531 GPHNQ9NQX3 736 aaPredicted RBP10.69□□□□□ -0.7
PTP4A2-202ENST00000468531 BIVM-ERCC5R4GMW8 1640 aa10.68□□□□□ -0.7
PTP4A2-202ENST00000468531 WDR97A6NE52 1622 aa10.67□□□□□ -0.7
PTP4A2-202ENST00000468531 CRISPLD2Q9H0B8 497 aa10.67□□□□□ -0.7
PTP4A2-202ENST00000468531 CHD1O14646 1710 aa10.67□□□□□ -0.7
PTP4A2-202ENST00000468531 NCKAP5LQ9HCH0 1330 aa10.66□□□□□ -0.7
PTP4A2-202ENST00000468531 SYNJ1O43426 1573 aa10.66□□□□□ -0.7
PTP4A2-202ENST00000468531 FOXK1P85037 733 aa10.66□□□□□ -0.7
PTP4A2-202ENST00000468531 AQRO60306 1485 aaKnown RBP eCLIP10.66□□□□□ -0.75e-8■□□□□ 9
PTP4A2-202ENST00000468531 DSG2Q14126 1118 aa10.65□□□□□ -0.7
PTP4A2-202ENST00000468531 ARSIQ5FYB1 569 aa10.65□□□□□ -0.7
PTP4A2-202ENST00000468531 PBRM1Q86U86 1689 aa10.65□□□□□ -0.7
PTP4A2-202ENST00000468531 TOP2BQ02880 1626 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms