RNA–Protein interactions for RNA: ENST00000465057.5

CMTM1-207, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 797 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-207ENST00000465057 SCUBE2Q9NQ36 999 aa10.3□□□□□ -0.76
CMTM1-207ENST00000465057 STK25O00506 426 aa10.29□□□□□ -0.76
CMTM1-207ENST00000465057 CADPSQ9ULU8 1353 aa10.28□□□□□ -0.76
CMTM1-207ENST00000465057 SOX12O15370 315 aa10.28□□□□□ -0.76
CMTM1-207ENST00000465057 STK24Q9Y6E0 443 aa10.28□□□□□ -0.76
CMTM1-207ENST00000465057 MRC2Q9UBG0 1479 aa10.26□□□□□ -0.77
CMTM1-207ENST00000465057 WDR62O43379 1518 aa10.26□□□□□ -0.77
CMTM1-207ENST00000465057 TOP2AP11388 1531 aaKnown RBP10.25□□□□□ -0.77
CMTM1-207ENST00000465057 L3MBTL3Q96JM7 780 aaPredicted RBP10.25□□□□□ -0.77
CMTM1-207ENST00000465057 RSF1Q96T23 1441 aaPredicted RBP10.24□□□□□ -0.77
CMTM1-207ENST00000465057 DPY19L2Q6NUT2 758 aa10.24□□□□□ -0.77
CMTM1-207ENST00000465057 PRDM2Q13029 1718 aa10.24□□□□□ -0.77
CMTM1-207ENST00000465057 CEP164Q9UPV0 1460 aa10.23□□□□□ -0.77
CMTM1-207ENST00000465057 FANCD2Q9BXW9 1451 aa10.22□□□□□ -0.77
CMTM1-207ENST00000465057 PHF8Q9UPP1 1060 aa10.21□□□□□ -0.77
CMTM1-207ENST00000465057 CFTRP13569 1480 aa10.19□□□□□ -0.78
CMTM1-207ENST00000465057 HS6ST3Q8IZP7 471 aa10.19□□□□□ -0.78
CMTM1-207ENST00000465057 NLRP6P59044 892 aa10.18□□□□□ -0.78
CMTM1-207ENST00000465057 MS4A4AQ96JQ5 239 aa10.18□□□□□ -0.78
CMTM1-207ENST00000465057 BOLA1Q9Y3E2 137 aa10.18□□□□□ -0.78
CMTM1-207ENST00000465057 FBXO22Q8NEZ5 403 aa10.17□□□□□ -0.78
CMTM1-207ENST00000465057 MFRPQ9BY79 579 aa10.17□□□□□ -0.78
CMTM1-207ENST00000465057 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.17□□□□□ -0.78
CMTM1-207ENST00000465057 AMER1Q5JTC6 1135 aaPredicted RBP10.16□□□□□ -0.78
CMTM1-207ENST00000465057 SLAIN1Q8ND83 568 aa10.16□□□□□ -0.78
CMTM1-207ENST00000465057 POTEMA6NI47 508 aa10.15□□□□□ -0.78
CMTM1-207ENST00000465057 G3V3G9 751 aa10.15□□□□□ -0.78
CMTM1-207ENST00000465057 CHGAP10645 457 aaKnown RBP10.15□□□□□ -0.78
CMTM1-207ENST00000465057 URB2Q14146 1524 aaKnown RBP10.15□□□□□ -0.78
CMTM1-207ENST00000465057 C3orf67Q6ZVT6 689 aa10.14□□□□□ -0.79
CMTM1-207ENST00000465057 TMEM121BQ9BXQ6 578 aaPredicted RBP10.14□□□□□ -0.79
CMTM1-207ENST00000465057 POTEGQ6S5H5 508 aa10.12□□□□□ -0.79
CMTM1-207ENST00000465057 CCDC88BA6NC98 1476 aa10.11□□□□□ -0.79
CMTM1-207ENST00000465057 MICALL2Q8IY33 904 aa10.09□□□□□ -0.79
CMTM1-207ENST00000465057 RTN4Q9NQC3 1192 aaKnown RBP10.09□□□□□ -0.79
CMTM1-207ENST00000465057 PCDH10Q9P2E7 1040 aa10.07□□□□□ -0.8
CMTM1-207ENST00000465057 NKX1-1Q15270 411 aaPredicted RBP10.04□□□□□ -0.8
CMTM1-207ENST00000465057 TOPBP1Q92547 1522 aa10.03□□□□□ -0.8
CMTM1-207ENST00000465057 FAM163AQ96GL9 167 aaPredicted RBP10.03□□□□□ -0.8
CMTM1-207ENST00000465057 ZNF608Q9ULD9 1512 aaPredicted RBP10.02□□□□□ -0.8
CMTM1-207ENST00000465057 EIF4G3O43432 1585 aaKnown RBP10.01□□□□□ -0.81
CMTM1-207ENST00000465057 SNPHO15079 494 aa10.01□□□□□ -0.81
CMTM1-207ENST00000465057 PPP1R37O75864 691 aa10.01□□□□□ -0.81
CMTM1-207ENST00000465057 DNMBPQ6XZF7 1577 aa10.01□□□□□ -0.81
CMTM1-207ENST00000465057 LCE2DQ5TA82 110 aaPredicted RBP10□□□□□ -0.81
CMTM1-207ENST00000465057 TMEM92Q6UXU6 159 aa10□□□□□ -0.81
CMTM1-207ENST00000465057 IFT140Q96RY7 1462 aa9.99□□□□□ -0.81
CMTM1-207ENST00000465057 RYDENQ9NUL5 291 aaKnown RBP9.98□□□□□ -0.81
CMTM1-207ENST00000465057 CHD1O14646 1710 aa9.98□□□□□ -0.81
CMTM1-207ENST00000465057 TARBP1Q13395 1621 aaKnown RBP9.97□□□□□ -0.81
CMTM1-207ENST00000465057 RIMBP3CA6NJZ7 1639 aa9.96□□□□□ -0.81
CMTM1-207ENST00000465057 RIMBP3BA6NNM3 1639 aa9.96□□□□□ -0.81
CMTM1-207ENST00000465057 RIMBP3Q9UFD9 1639 aa9.96□□□□□ -0.81
CMTM1-207ENST00000465057 ST18O60284 1047 aa9.95□□□□□ -0.82
CMTM1-207ENST00000465057 ABCC8Q09428 1581 aa9.95□□□□□ -0.82
CMTM1-207ENST00000465057 POLA1P09884 1462 aaPredicted RBP9.93□□□□□ -0.82
CMTM1-207ENST00000465057 GTPBP6O43824 516 aaPredicted RBP9.93□□□□□ -0.82
CMTM1-207ENST00000465057 KIF3CO14782 793 aa9.91□□□□□ -0.82
CMTM1-207ENST00000465057 HOXB3P14651 431 aaPredicted RBP9.91□□□□□ -0.82
CMTM1-207ENST00000465057 AQRO60306 1485 aaKnown RBP eCLIP9.91□□□□□ -0.82
CMTM1-207ENST00000465057 ARHGEF11O15085 1522 aa9.9□□□□□ -0.82
CMTM1-207ENST00000465057 RAD54L2Q9Y4B4 1467 aa9.9□□□□□ -0.83
CMTM1-207ENST00000465057 BBXQ8WY36 941 aaPredicted RBP9.89□□□□□ -0.83
CMTM1-207ENST00000465057 C2orf72A6NCS6 295 aa9.88□□□□□ -0.83
CMTM1-207ENST00000465057 DOK7Q18PE1 504 aa9.88□□□□□ -0.83
CMTM1-207ENST00000465057 WDR97A6NE52 1622 aa9.88□□□□□ -0.83
CMTM1-207ENST00000465057 CUX1P39880 1505 aa9.87□□□□□ -0.83
CMTM1-207ENST00000465057 FGD5Q6ZNL6 1462 aa9.87□□□□□ -0.83
CMTM1-207ENST00000465057 TMC2Q8TDI7 906 aa9.86□□□□□ -0.83
CMTM1-207ENST00000465057 PBRM1Q86U86 1689 aa9.86□□□□□ -0.83
CMTM1-207ENST00000465057 SOGA1O94964 1423 aa9.84□□□□□ -0.83
CMTM1-207ENST00000465057 ZNF710Q8N1W2 664 aa9.84□□□□□ -0.83
CMTM1-207ENST00000465057 TDRD9Q8NDG6 1382 aaKnown RBP9.83□□□□□ -0.84
CMTM1-207ENST00000465057 SNAPC4Q5SXM2 1469 aa9.83□□□□□ -0.84
CMTM1-207ENST00000465057 RIMBP2O15034 1052 aa9.82□□□□□ -0.84
CMTM1-207ENST00000465057 ZSWIM6Q9HCJ5 1215 aa9.81□□□□□ -0.84
CMTM1-207ENST00000465057 GPHNQ9NQX3 736 aaPredicted RBP9.81□□□□□ -0.84
CMTM1-207ENST00000465057 ARAP1Q96P48 1450 aa9.8□□□□□ -0.84
CMTM1-207ENST00000465057 SUPT5HO00267 1087 aaKnown RBP9.8□□□□□ -0.84
CMTM1-207ENST00000465057 HOXB1P14653 301 aaPredicted RBP9.8□□□□□ -0.84
CMTM1-207ENST00000465057 MARVELD3Q96A59 401 aa9.8□□□□□ -0.84
CMTM1-207ENST00000465057 CLASP1Q7Z460 1538 aa9.79□□□□□ -0.84
CMTM1-207ENST00000465057 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.79□□□□□ -0.84
CMTM1-207ENST00000465057 ABCA5Q8WWZ7 1642 aa9.78□□□□□ -0.84
CMTM1-207ENST00000465057 FOXK1P85037 733 aa9.78□□□□□ -0.84
CMTM1-207ENST00000465057 SYNJ1O43426 1573 aa9.77□□□□□ -0.85
CMTM1-207ENST00000465057 EMP3P54852 163 aa9.77□□□□□ -0.85
CMTM1-207ENST00000465057 GPR153Q6NV75 609 aa9.77□□□□□ -0.85
CMTM1-207ENST00000465057 SPRYD3Q8NCJ5 442 aa9.77□□□□□ -0.85
CMTM1-207ENST00000465057 CRISPLD2Q9H0B8 497 aa9.77□□□□□ -0.85
CMTM1-207ENST00000465057 GRIN2BQ13224 1484 aa9.77□□□□□ -0.85
CMTM1-207ENST00000465057 MAGI1Q96QZ7 1491 aaPredicted RBP9.77□□□□□ -0.85
CMTM1-207ENST00000465057 SLC34A2O95436 690 aa9.76□□□□□ -0.85
CMTM1-207ENST00000465057 CYB5RLQ6IPT4 315 aa9.76□□□□□ -0.85
CMTM1-207ENST00000465057 BIVM-ERCC5R4GMW8 1640 aa9.75□□□□□ -0.85
CMTM1-207ENST00000465057 PDE4AP27815 886 aa9.75□□□□□ -0.85
CMTM1-207ENST00000465057 DSG2Q14126 1118 aa9.75□□□□□ -0.85
CMTM1-207ENST00000465057 SYNJ2O15056 1496 aa9.74□□□□□ -0.85
CMTM1-207ENST00000465057 GAPVD1Q14C86 1478 aa9.74□□□□□ -0.85
CMTM1-207ENST00000465057 ABCA10Q8WWZ4 1543 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms