RNA–Protein interactions for RNA: ENST00000464395.1

PITRM1-209, Transcript of pitrilysin metallopeptidase 1, humanhuman

TSL 1 (best)

Gene PITRM1, Length 3,240 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITRM1-209ENST00000464395 ERCC6Q03468 1493 aa15.71■□□□□ 0.11
PITRM1-209ENST00000464395 PRG4Q92954 1404 aaPredicted RBP15.71■□□□□ 0.11
PITRM1-209ENST00000464395 TONSLQ96HA7 1378 aa15.71■□□□□ 0.11
PITRM1-209ENST00000464395 ADGRL2O95490 1459 aa15.7■□□□□ 0.1
PITRM1-209ENST00000464395 CAMSAP2Q08AD1 1489 aa15.7■□□□□ 0.1
PITRM1-209ENST00000464395 TEX14Q8IWB6 1497 aa15.69■□□□□ 0.1
PITRM1-209ENST00000464395 POLR1AO95602 1720 aaPredicted RBP15.69■□□□□ 0.1
PITRM1-209ENST00000464395 DDX10Q13206 875 aaKnown RBP15.68■□□□□ 0.1
PITRM1-209ENST00000464395 ABCC10Q5T3U5 1492 aa15.68■□□□□ 0.1
PITRM1-209ENST00000464395 ANKRD30BQ9BXX2 1392 aa15.68■□□□□ 0.1
PITRM1-209ENST00000464395 ZNF644Q9H582 1327 aaPredicted RBP15.67■□□□□ 0.1
PITRM1-209ENST00000464395 PZPP20742 1482 aa15.67■□□□□ 0.1
PITRM1-209ENST00000464395 CHIC2Q9UKJ5 165 aa15.67■□□□□ 0.1
PITRM1-209ENST00000464395 RPRD2Q5VT52 1461 aaKnown RBP15.67■□□□□ 0.1
PITRM1-209ENST00000464395 MYT1Q01538 1121 aa15.66■□□□□ 0.1
PITRM1-209ENST00000464395 MPHOSPH9Q99550 1183 aa15.66■□□□□ 0.1
PITRM1-209ENST00000464395 HIRIP3Q9BW71 556 aaPredicted RBP15.65■□□□□ 0.1
PITRM1-209ENST00000464395 NCOA1Q15788 1441 aa15.63■□□□□ 0.09
PITRM1-209ENST00000464395 ARID3CA6NKF2 412 aa15.63■□□□□ 0.09
PITRM1-209ENST00000464395 ATP10BO94823 1461 aa15.62■□□□□ 0.09
PITRM1-209ENST00000464395 CCER2I3L3R5 266 aa15.62■□□□□ 0.09
PITRM1-209ENST00000464395 SHROOM2Q13796 1616 aa15.62■□□□□ 0.09
PITRM1-209ENST00000464395 MBD5Q9P267 1494 aa15.62■□□□□ 0.09
PITRM1-209ENST00000464395 CHD1O14646 1710 aa15.6■□□□□ 0.09
PITRM1-209ENST00000464395 CARMIL2Q6F5E8 1435 aa15.59■□□□□ 0.09
PITRM1-209ENST00000464395 JPH4Q96JJ6 628 aa15.59■□□□□ 0.09
PITRM1-209ENST00000464395 SUPT16HQ9Y5B9 1047 aaKnown RBP15.59■□□□□ 0.09
PITRM1-209ENST00000464395 SPATA31E1Q6ZUB1 1445 aa15.59■□□□□ 0.09
PITRM1-209ENST00000464395 SHANK2Q9UPX8 1470 aa15.59■□□□□ 0.09
PITRM1-209ENST00000464395 CDC42BPBQ9Y5S2 1711 aa15.58■□□□□ 0.09
PITRM1-209ENST00000464395 CHMP7Q8WUX9 453 aaPredicted RBP15.58■□□□□ 0.08
PITRM1-209ENST00000464395 KDM5DQ9BY66 1539 aa15.57■□□□□ 0.08
PITRM1-209ENST00000464395 WASHC2AQ641Q2 1341 aa15.56■□□□□ 0.08
PITRM1-209ENST00000464395 ARHGEF5Q12774 1597 aa15.56■□□□□ 0.08
PITRM1-209ENST00000464395 FOXD1Q16676 465 aa15.55■□□□□ 0.08
PITRM1-209ENST00000464395 L3MBTL2Q969R5 705 aa15.55■□□□□ 0.08
PITRM1-209ENST00000464395 CDK11AQ9UQ88 783 aaPredicted RBP15.55■□□□□ 0.08
PITRM1-209ENST00000464395 PREX2Q70Z35 1606 aa15.54■□□□□ 0.08
PITRM1-209ENST00000464395 HSPA5P11021 654 aaKnown RBP15.53■□□□□ 0.08
PITRM1-209ENST00000464395 NBPF8Q3BBV2 869 aa15.53■□□□□ 0.08
PITRM1-209ENST00000464395 SAMD9LQ8IVG5 1584 aa15.52■□□□□ 0.08
PITRM1-209ENST00000464395 TRIM52Q96A61 297 aa15.52■□□□□ 0.08
PITRM1-209ENST00000464395 C11orf95C9JLR9 678 aaPredicted RBP15.5■□□□□ 0.07
PITRM1-209ENST00000464395 PTPRGP23470 1445 aa15.5■□□□□ 0.07
PITRM1-209ENST00000464395 BCORL1Q5H9F3 1711 aa15.5■□□□□ 0.07
PITRM1-209ENST00000464395 KIAA1107Q9UPP5 1409 aa15.5■□□□□ 0.07
PITRM1-209ENST00000464395 CFDP1Q9UEE9 299 aaPredicted RBP15.49■□□□□ 0.07
PITRM1-209ENST00000464395 CNTLNQ9NXG0 1405 aa15.48■□□□□ 0.07
PITRM1-209ENST00000464395 KDM5CP41229 1560 aa15.47■□□□□ 0.07
PITRM1-209ENST00000464395 ANP32CO43423 234 aa15.47■□□□□ 0.07
PITRM1-209ENST00000464395 MAST1Q9Y2H9 1570 aa15.46■□□□□ 0.07
PITRM1-209ENST00000464395 CCDC7Q96M83 1385 aa15.46■□□□□ 0.06
PITRM1-209ENST00000464395 C9orf84Q5VXU9 1444 aa15.45■□□□□ 0.06
PITRM1-209ENST00000464395 ERCC6L2Q5T890 1561 aa15.45■□□□□ 0.06
PITRM1-209ENST00000464395 ANKRD50Q9ULJ7 1429 aa15.45■□□□□ 0.06
PITRM1-209ENST00000464395 TTC37Q6PGP7 1564 aa15.45■□□□□ 0.06
PITRM1-209ENST00000464395 ANKRD30AQ9BXX3 1397 aa15.44■□□□□ 0.06
PITRM1-209ENST00000464395 UHRF1BP1Q6BDS2 1440 aa15.44■□□□□ 0.06
PITRM1-209ENST00000464395 EIF4G2P78344 907 aaKnown RBP eCLIP15.43■□□□□ 0.06
PITRM1-209ENST00000464395 FBLN2P98095 1184 aa15.43■□□□□ 0.06
PITRM1-209ENST00000464395 SLC4A1APQ9BWU0 796 aaKnown RBP15.43■□□□□ 0.06
PITRM1-209ENST00000464395 UNC13BO14795 1591 aa15.42■□□□□ 0.06
PITRM1-209ENST00000464395 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.42■□□□□ 0.06
PITRM1-209ENST00000464395 ARHGEF12Q9NZN5 1544 aa15.41■□□□□ 0.06
PITRM1-209ENST00000464395 CLASP1Q7Z460 1538 aa15.39■□□□□ 0.05
PITRM1-209ENST00000464395 PLEKHD1A6NEE1 506 aa15.39■□□□□ 0.05
PITRM1-209ENST00000464395 MYO5CQ9NQX4 1742 aa15.39■□□□□ 0.05
PITRM1-209ENST00000464395 PLXNC1O60486 1568 aa15.39■□□□□ 0.05
PITRM1-209ENST00000464395 ABCC2Q92887 1545 aa15.38■□□□□ 0.05
PITRM1-209ENST00000464395 CCDC141Q6ZP82 1450 aa15.38■□□□□ 0.05
PITRM1-209ENST00000464395 RALGAPBQ86X10 1494 aa15.38■□□□□ 0.05
PITRM1-209ENST00000464395 E9PCH4 1651 aa15.37■□□□□ 0.05
PITRM1-209ENST00000464395 KIF7Q2M1P5 1343 aa15.36■□□□□ 0.05
PITRM1-209ENST00000464395 CCDC184Q52MB2 194 aa15.36■□□□□ 0.05
PITRM1-209ENST00000464395 DHX29Q7Z478 1369 aaKnown RBP15.35■□□□□ 0.05
PITRM1-209ENST00000464395 SYCP2Q9BX26 1530 aa15.35■□□□□ 0.05
PITRM1-209ENST00000464395 FAM135AQ9P2D6 1515 aa15.35■□□□□ 0.05
PITRM1-209ENST00000464395 IQGAP3Q86VI3 1631 aa15.35■□□□□ 0.05
PITRM1-209ENST00000464395 PKD2Q13563 968 aa15.34■□□□□ 0.05
PITRM1-209ENST00000464395 ZNF777Q9ULD5 760 aaPredicted RBP15.34■□□□□ 0.05
PITRM1-209ENST00000464395 MAGI2Q86UL8 1455 aa15.34■□□□□ 0.05
PITRM1-209ENST00000464395 ZCCHC11Q5TAX3 1644 aaKnown RBP15.34■□□□□ 0.05
PITRM1-209ENST00000464395 KIF15Q9NS87 1388 aa15.33■□□□□ 0.04
PITRM1-209ENST00000464395 TRPM1Q7Z4N2 1603 aa15.33■□□□□ 0.04
PITRM1-209ENST00000464395 PRKRIP1Q9H875 184 aaPredicted RBP15.32■□□□□ 0.04
PITRM1-209ENST00000464395 PLA2R1Q13018 1463 aa15.31■□□□□ 0.04
PITRM1-209ENST00000464395 UHRF1BP1LA0JNW5 1464 aa15.31■□□□□ 0.04
PITRM1-209ENST00000464395 NUP155O75694 1391 aa15.31■□□□□ 0.04
PITRM1-209ENST00000464395 HNRNPMP52272 730 aaKnown RBP eCLIP15.3■□□□□ 0.04
PITRM1-209ENST00000464395 LAMC1P11047 1609 aa15.29■□□□□ 0.04
PITRM1-209ENST00000464395 TSHZ2Q9NRE2 1034 aa15.29■□□□□ 0.04
PITRM1-209ENST00000464395 USP47Q96K76 1375 aa15.28■□□□□ 0.04
PITRM1-209ENST00000464395 ARHGAP5Q13017 1502 aa15.26■□□□□ 0.03
PITRM1-209ENST00000464395 FKBP8Q14318 412 aa15.26■□□□□ 0.03
PITRM1-209ENST00000464395 ATP10AO60312 1499 aa15.26■□□□□ 0.03
PITRM1-209ENST00000464395 ABCC1P33527 1531 aa15.25■□□□□ 0.03
PITRM1-209ENST00000464395 RSPH4AQ5TD94 716 aa15.25■□□□□ 0.03
PITRM1-209ENST00000464395 ARID4BQ4LE39 1312 aaPredicted RBP15.25■□□□□ 0.03
PITRM1-209ENST00000464395 DUOX2Q9NRD8 1548 aa15.23■□□□□ 0.03
PITRM1-209ENST00000464395 PLEKHH2Q8IVE3 1493 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms