RNA–Protein interactions for RNA: ENST00000463687.1

VPS8-216, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 568 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-216ENST00000463687 SLC39A7Q92504 469 aa11.6□□□□□ -0.55
VPS8-216ENST00000463687 CHRM1P11229 460 aaPredicted RBP11.59□□□□□ -0.55
VPS8-216ENST00000463687 DAXXQ9UER7 740 aaPredicted RBP11.59□□□□□ -0.55
VPS8-216ENST00000463687 WDR62O43379 1518 aa11.59□□□□□ -0.55
VPS8-216ENST00000463687 THOC2Q8NI27 1593 aaKnown RBP11.58□□□□□ -0.55
VPS8-216ENST00000463687 URB2Q14146 1524 aaKnown RBP11.58□□□□□ -0.56
VPS8-216ENST00000463687 KIF21AQ7Z4S6 1674 aa11.58□□□□□ -0.56
VPS8-216ENST00000463687 POTEMA6NI47 508 aa11.57□□□□□ -0.56
VPS8-216ENST00000463687 C14orf37Q86TY3 774 aa11.57□□□□□ -0.56
VPS8-216ENST00000463687 ABCC8Q09428 1581 aa11.57□□□□□ -0.56
VPS8-216ENST00000463687 MAP3K13O43283 966 aa11.56□□□□□ -0.56
VPS8-216ENST00000463687 KIF12Q96FN5 646 aa11.56□□□□□ -0.56
VPS8-216ENST00000463687 POTEJP0CG39 1038 aa11.54□□□□□ -0.56
VPS8-216ENST00000463687 PCDHB8Q9UN66 801 aa11.54□□□□□ -0.56
VPS8-216ENST00000463687 PCDHB13Q9Y5F0 798 aa11.54□□□□□ -0.56
VPS8-216ENST00000463687 ATN1P54259 1190 aaPredicted RBP11.53□□□□□ -0.56
VPS8-216ENST00000463687 POTEGQ6S5H5 508 aa11.53□□□□□ -0.56
VPS8-216ENST00000463687 TOPBP1Q92547 1522 aa11.53□□□□□ -0.56
VPS8-216ENST00000463687 STK24Q9Y6E0 443 aa11.51□□□□□ -0.57
VPS8-216ENST00000463687 MAMSTRQ6ZN01 415 aa11.5□□□□□ -0.57
VPS8-216ENST00000463687 IFNL1Q8IU54 200 aa11.5□□□□□ -0.57
VPS8-216ENST00000463687 HOMEZQ8IX15 550 aa11.5□□□□□ -0.57
VPS8-216ENST00000463687 WDR70Q9NW82 654 aa11.49□□□□□ -0.57
VPS8-216ENST00000463687 WRNQ14191 1432 aaPredicted RBP eCLIP11.49□□□□□ -0.57
VPS8-216ENST00000463687 DNMBPQ6XZF7 1577 aa11.49□□□□□ -0.57
VPS8-216ENST00000463687 SGIP1Q9BQI5 828 aa11.48□□□□□ -0.57
VPS8-216ENST00000463687 IFT140Q96RY7 1462 aa11.48□□□□□ -0.57
VPS8-216ENST00000463687 PRDM2Q13029 1718 aa11.48□□□□□ -0.57
VPS8-216ENST00000463687 BCL11BQ9C0K0 894 aaPredicted RBP11.47□□□□□ -0.57
VPS8-216ENST00000463687 ZNF467Q7Z7K2 595 aaPredicted RBP11.46□□□□□ -0.57
VPS8-216ENST00000463687 BMP2KQ9NSY1 1161 aaPredicted RBP11.46□□□□□ -0.57
VPS8-216ENST00000463687 TRPC6Q9Y210 931 aa11.46□□□□□ -0.57
VPS8-216ENST00000463687 CUX1P39880 1505 aa11.45□□□□□ -0.58
VPS8-216ENST00000463687 POLA1P09884 1462 aaPredicted RBP11.45□□□□□ -0.58
VPS8-216ENST00000463687 SOGA1O94964 1423 aa11.45□□□□□ -0.58
VPS8-216ENST00000463687 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.44□□□□□ -0.58
VPS8-216ENST00000463687 ZFP91Q96JP5 570 aaPredicted RBP11.44□□□□□ -0.58
VPS8-216ENST00000463687 LMOD2Q6P5Q4 547 aa11.43□□□□□ -0.58
VPS8-216ENST00000463687 SCUBE2Q9NQ36 999 aa11.43□□□□□ -0.58
VPS8-216ENST00000463687 FGD5Q6ZNL6 1462 aa11.43□□□□□ -0.58
VPS8-216ENST00000463687 RAD54L2Q9Y4B4 1467 aa11.41□□□□□ -0.58
VPS8-216ENST00000463687 POTEFA5A3E0 1075 aa11.41□□□□□ -0.58
VPS8-216ENST00000463687 FAM163AQ96GL9 167 aaPredicted RBP11.41□□□□□ -0.58
VPS8-216ENST00000463687 TIE1P35590 1138 aa11.4□□□□□ -0.58
VPS8-216ENST00000463687 PSEN1P49768 467 aa11.4□□□□□ -0.58
VPS8-216ENST00000463687 PDAP1Q13442 181 aaKnown RBP11.39□□□□□ -0.59
VPS8-216ENST00000463687 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.39□□□□□ -0.59
VPS8-216ENST00000463687 ZNF608Q9ULD9 1512 aaPredicted RBP11.38□□□□□ -0.59
VPS8-216ENST00000463687 TDRD9Q8NDG6 1382 aaKnown RBP11.38□□□□□ -0.59
VPS8-216ENST00000463687 PCDH10Q9P2E7 1040 aa11.37□□□□□ -0.59
VPS8-216ENST00000463687 AQRO60306 1485 aaKnown RBP eCLIP11.37□□□□□ -0.59
VPS8-216ENST00000463687 TOP2BQ02880 1626 aa11.36□□□□□ -0.59
VPS8-216ENST00000463687 KCNV2Q8TDN2 545 aa11.35□□□□□ -0.59
VPS8-216ENST00000463687 SYNJ1O43426 1573 aa11.35□□□□□ -0.59
VPS8-216ENST00000463687 TTLL13PA6NNM8 815 aa11.34□□□□□ -0.59
VPS8-216ENST00000463687 SEC24BO95487 1268 aa11.34□□□□□ -0.59
VPS8-216ENST00000463687 LCE2DQ5TA82 110 aaPredicted RBP11.34□□□□□ -0.59
VPS8-216ENST00000463687 ABCA10Q8WWZ4 1543 aa11.34□□□□□ -0.59
VPS8-216ENST00000463687 COLQQ9Y215 455 aaPredicted RBP11.33□□□□□ -0.6
VPS8-216ENST00000463687 TARBP1Q13395 1621 aaKnown RBP11.33□□□□□ -0.6
VPS8-216ENST00000463687 TMEM106CQ9BVX2 250 aa11.32□□□□□ -0.6
VPS8-216ENST00000463687 BIVM-ERCC5R4GMW8 1640 aa11.31□□□□□ -0.6
VPS8-216ENST00000463687 BRPF1P55201 1214 aaPredicted RBP11.3□□□□□ -0.6
VPS8-216ENST00000463687 GAPVD1Q14C86 1478 aa11.29□□□□□ -0.6
VPS8-216ENST00000463687 GRIN2BQ13224 1484 aa11.28□□□□□ -0.6
VPS8-216ENST00000463687 TRIM35Q9UPQ4 493 aa11.28□□□□□ -0.6
VPS8-216ENST00000463687 WDR97A6NE52 1622 aa11.27□□□□□ -0.6
VPS8-216ENST00000463687 CABP2Q9NPB3 220 aa11.27□□□□□ -0.61
VPS8-216ENST00000463687 EIF4G3O43432 1585 aaKnown RBP11.26□□□□□ -0.61
VPS8-216ENST00000463687 NEUROD2Q15784 382 aa11.26□□□□□ -0.61
VPS8-216ENST00000463687 CHMP7Q8WUX9 453 aaPredicted RBP11.26□□□□□ -0.61
VPS8-216ENST00000463687 KIF27Q86VH2 1401 aa11.26□□□□□ -0.61
VPS8-216ENST00000463687 CADPS2Q86UW7 1296 aa11.25□□□□□ -0.61
VPS8-216ENST00000463687 IER5LQ5T953 404 aa11.24□□□□□ -0.61
VPS8-216ENST00000463687 SNAPC4Q5SXM2 1469 aa11.24□□□□□ -0.61
VPS8-216ENST00000463687 MAGI1Q96QZ7 1491 aaPredicted RBP11.23□□□□□ -0.61
VPS8-216ENST00000463687 IGF1RP08069 1367 aa11.22□□□□□ -0.61
VPS8-216ENST00000463687 EFCAB3Q8N7B9 438 aa11.22□□□□□ -0.61
VPS8-216ENST00000463687 ZC3H15Q8WU90 426 aaKnown RBP11.22□□□□□ -0.61
VPS8-216ENST00000463687 ARHGEF1Q92888 912 aaKnown RBP11.22□□□□□ -0.61
VPS8-216ENST00000463687 ABCA5Q8WWZ7 1642 aa11.2□□□□□ -0.62
VPS8-216ENST00000463687 GOLGA2Q08379 1002 aa11.19□□□□□ -0.62
VPS8-216ENST00000463687 ERICH3Q5RHP9 1530 aa11.19□□□□□ -0.62
VPS8-216ENST00000463687 SYNJ2O15056 1496 aa11.19□□□□□ -0.62
VPS8-216ENST00000463687 FHAD1B1AJZ9 1412 aa11.18□□□□□ -0.62
VPS8-216ENST00000463687 SLAIN1Q8ND83 568 aa11.16□□□□□ -0.62
VPS8-216ENST00000463687 SLC24A3Q9HC58 644 aa11.16□□□□□ -0.62
VPS8-216ENST00000463687 MKRN3Q13064 507 aaKnown RBP11.15□□□□□ -0.62
VPS8-216ENST00000463687 E2F4Q16254 413 aa11.15□□□□□ -0.62
VPS8-216ENST00000463687 CARMIL1Q5VZK9 1371 aa11.15□□□□□ -0.63
VPS8-216ENST00000463687 PHF8Q9UPP1 1060 aa11.14□□□□□ -0.63
VPS8-216ENST00000463687 PLCG2P16885 1265 aa11.13□□□□□ -0.63
VPS8-216ENST00000463687 SMYD5Q6GMV2 418 aa11.13□□□□□ -0.63
VPS8-216ENST00000463687 MFRPQ9BY79 579 aa11.13□□□□□ -0.63
VPS8-216ENST00000463687 CDAN1Q8IWY9 1227 aa11.12□□□□□ -0.63
VPS8-216ENST00000463687 RUSC2Q8N2Y8 1516 aa11.12□□□□□ -0.63
VPS8-216ENST00000463687 GRIN2AQ12879 1464 aa11.12□□□□□ -0.63
VPS8-216ENST00000463687 TESPA1A2RU30 521 aaPredicted RBP11.11□□□□□ -0.63
VPS8-216ENST00000463687 SEMA3EO15041 775 aa11.1□□□□□ -0.63
VPS8-216ENST00000463687 SOX12O15370 315 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms