RNA–Protein interactions for RNA: ENST00000463687.1

VPS8-216, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 568 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-216ENST00000463687 AEBP2Q6ZN18 517 aaPredicted RBP23.97■■□□□ 1.43
VPS8-216ENST00000463687 CHIC1Q5VXU3 224 aa22.51■■□□□ 1.19
VPS8-216ENST00000463687 SENP3Q9H4L4 574 aaPredicted RBP20.48■□□□□ 0.87
VPS8-216ENST00000463687 PHF23Q9BUL5 403 aaPredicted RBP20.21■□□□□ 0.83
VPS8-216ENST00000463687 FOXD1Q16676 465 aa19.14■□□□□ 0.65
VPS8-216ENST00000463687 PLPPR3Q6T4P5 718 aa18.03■□□□□ 0.48
VPS8-216ENST00000463687 POTEDQ86YR6 584 aa18.02■□□□□ 0.48
VPS8-216ENST00000463687 MSH5O43196 834 aa17.99■□□□□ 0.47
VPS8-216ENST00000463687 PIAS4Q8N2W9 510 aaPredicted RBP17.83■□□□□ 0.44
VPS8-216ENST00000463687 PPP6R1Q9UPN7 881 aa17.71■□□□□ 0.43
VPS8-216ENST00000463687 ADRA2BP18089 450 aa17.65■□□□□ 0.42
VPS8-216ENST00000463687 MAPK8IP2Q13387 824 aaPredicted RBP16.31■□□□□ 0.2
VPS8-216ENST00000463687 DMRT2Q9Y5R5 561 aa16.19■□□□□ 0.18
VPS8-216ENST00000463687 SCAF1Q9H7N4 1312 aaKnown RBP16.15■□□□□ 0.18
VPS8-216ENST00000463687 PPP4R3CPQ6ZMV5 832 aa15.95■□□□□ 0.14
VPS8-216ENST00000463687 NISCHQ9Y2I1 1504 aa15.89■□□□□ 0.13
VPS8-216ENST00000463687 EHMT2Q96KQ7 1210 aa15.82■□□□□ 0.12
VPS8-216ENST00000463687 KCNA4P22459 653 aa15.72■□□□□ 0.11
VPS8-216ENST00000463687 CACNB1Q02641 598 aaPredicted RBP15.65■□□□□ 0.1
VPS8-216ENST00000463687 DCAF8L1A6NGE4 600 aa15.63■□□□□ 0.09
VPS8-216ENST00000463687 NCBP3Q53F19 620 aaKnown RBP15.51■□□□□ 0.07
VPS8-216ENST00000463687 HOXD11P31277 338 aaPredicted RBP15.5■□□□□ 0.07
VPS8-216ENST00000463687 CNKSR2Q8WXI2 1034 aa15.44■□□□□ 0.06
VPS8-216ENST00000463687 NPM3O75607 178 aaKnown RBP15.33■□□□□ 0.04
VPS8-216ENST00000463687 RNF39Q9H2S5 420 aa15.33■□□□□ 0.04
VPS8-216ENST00000463687 RNF216Q9NWF9 866 aaPredicted RBP15.32■□□□□ 0.04
VPS8-216ENST00000463687 SLC4A1APQ9BWU0 796 aaKnown RBP15.17■□□□□ 0.02
VPS8-216ENST00000463687 CSRNP3Q8WYN3 585 aa15.13■□□□□ 0.01
VPS8-216ENST00000463687 C1QBPQ07021 282 aaKnown RBP15.09■□□□□ 0.01
VPS8-216ENST00000463687 DNAJC5BQ9UF47 199 aa14.98□□□□□ -0.01
VPS8-216ENST00000463687 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.82□□□□□ -0.04
VPS8-216ENST00000463687 ZBTB22O15209 634 aa14.48□□□□□ -0.09
VPS8-216ENST00000463687 SLC4A2P04920 1241 aa14.47□□□□□ -0.09
VPS8-216ENST00000463687 U3KPZ7 1027 aaPredicted RBP14.44□□□□□ -0.1
VPS8-216ENST00000463687 FOXD4L1Q9NU39 408 aa14.38□□□□□ -0.11
VPS8-216ENST00000463687 CAPN15O75808 1086 aa14.34□□□□□ -0.11
VPS8-216ENST00000463687 SPINK5Q9NQ38 1064 aaPredicted RBP14.34□□□□□ -0.11
VPS8-216ENST00000463687 SLC24A1O60721 1099 aa14.32□□□□□ -0.12
VPS8-216ENST00000463687 DSG3P32926 999 aa14.28□□□□□ -0.12
VPS8-216ENST00000463687 AMER1Q5JTC6 1135 aaPredicted RBP14.17□□□□□ -0.14
VPS8-216ENST00000463687 MYCNP04198 464 aaPredicted RBP14.12□□□□□ -0.15
VPS8-216ENST00000463687 RTN4Q9NQC3 1192 aaKnown RBP14.09□□□□□ -0.15
VPS8-216ENST00000463687 POTEHQ6S545 545 aa14.07□□□□□ -0.16
VPS8-216ENST00000463687 TRHP20396 242 aaPredicted RBP14.06□□□□□ -0.16
VPS8-216ENST00000463687 APLP2Q06481 763 aa14.01□□□□□ -0.17
VPS8-216ENST00000463687 ABCB7O75027 752 aa13.99□□□□□ -0.17
VPS8-216ENST00000463687 ZNF219Q9P2Y4 722 aaPredicted RBP13.97□□□□□ -0.17
VPS8-216ENST00000463687 CCDC180Q9P1Z9 1646 aa13.95□□□□□ -0.18
VPS8-216ENST00000463687 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.94□□□□□ -0.18
VPS8-216ENST00000463687 HNRNPUL2Q1KMD3 747 aaKnown RBP13.94□□□□□ -0.18
VPS8-216ENST00000463687 SAMD1Q6SPF0 538 aaPredicted RBP13.89□□□□□ -0.19
VPS8-216ENST00000463687 ATF5Q9Y2D1 282 aaPredicted RBP13.84□□□□□ -0.19
VPS8-216ENST00000463687 ATXN8OSP0DMR3 200 aa13.81□□□□□ -0.2
VPS8-216ENST00000463687 ABCC9O60706 1549 aa13.69□□□□□ -0.22
VPS8-216ENST00000463687 FKBP8Q14318 412 aa13.69□□□□□ -0.22
VPS8-216ENST00000463687 RBM42Q9BTD8 480 aaKnown RBP13.62□□□□□ -0.23
VPS8-216ENST00000463687 POLA2Q14181 598 aa13.61□□□□□ -0.23
VPS8-216ENST00000463687 CHRDL2Q6WN34 429 aa13.44□□□□□ -0.26
VPS8-216ENST00000463687 DCAF8L2P0C7V8 631 aa13.35□□□□□ -0.27
VPS8-216ENST00000463687 AKT1S1Q96B36 256 aa13.26□□□□□ -0.29
VPS8-216ENST00000463687 ZBTB12Q9Y330 459 aaPredicted RBP13.26□□□□□ -0.29
VPS8-216ENST00000463687 ZCCHC6Q5VYS8 1495 aaKnown RBP13.25□□□□□ -0.29
VPS8-216ENST00000463687 MKRN4PQ13434 485 aaPredicted RBP13.21□□□□□ -0.29
VPS8-216ENST00000463687 NACADO15069 1562 aa13.2□□□□□ -0.3
VPS8-216ENST00000463687 MYO15BQ96JP2 1530 aa13.19□□□□□ -0.3
VPS8-216ENST00000463687 RB1CC1Q8TDY2 1594 aa13.17□□□□□ -0.3
VPS8-216ENST00000463687 FBLN2P98095 1184 aa13.17□□□□□ -0.3
VPS8-216ENST00000463687 DCAF1Q9Y4B6 1507 aa13.15□□□□□ -0.3
VPS8-216ENST00000463687 REM2Q8IYK8 340 aaPredicted RBP13.15□□□□□ -0.3
VPS8-216ENST00000463687 OSCARQ8IYS5 282 aa13.15□□□□□ -0.3
VPS8-216ENST00000463687 PIP4P2Q8N4L2 257 aa13.07□□□□□ -0.32
VPS8-216ENST00000463687 SP7Q8TDD2 431 aaPredicted RBP13.07□□□□□ -0.32
VPS8-216ENST00000463687 PITPNM1O00562 1244 aa13.01□□□□□ -0.33
VPS8-216ENST00000463687 FBXO3Q9UK99 471 aa13.01□□□□□ -0.33
VPS8-216ENST00000463687 PLCB2Q00722 1185 aa13□□□□□ -0.33
VPS8-216ENST00000463687 HAX1O00165 279 aa12.95□□□□□ -0.34
VPS8-216ENST00000463687 SPDYE4A6NLX3 237 aa12.94□□□□□ -0.34
VPS8-216ENST00000463687 FXR2P51116 673 aaKnown RBP eCLIP12.94□□□□□ -0.34
VPS8-216ENST00000463687 PABPN1Q86U42 306 aaKnown RBP eCLIP12.89□□□□□ -0.35
VPS8-216ENST00000463687 HAP1P54257 671 aaPredicted RBP12.87□□□□□ -0.35
VPS8-216ENST00000463687 SPDYE2BA6NHP3 402 aa12.84□□□□□ -0.35
VPS8-216ENST00000463687 SPDYE6P0CI01 402 aa12.84□□□□□ -0.35
VPS8-216ENST00000463687 SPDYE2Q495Y8 402 aa12.84□□□□□ -0.35
VPS8-216ENST00000463687 ZNF692Q9BU19 519 aaPredicted RBP12.83□□□□□ -0.36
VPS8-216ENST00000463687 BCANQ96GW7 911 aa12.8□□□□□ -0.36
VPS8-216ENST00000463687 SCRIBQ14160 1630 aa12.79□□□□□ -0.36
VPS8-216ENST00000463687 EVX2Q03828 476 aa12.75□□□□□ -0.37
VPS8-216ENST00000463687 CLEC11AQ9Y240 323 aa12.74□□□□□ -0.37
VPS8-216ENST00000463687 BICRAQ9NZM4 1560 aa12.73□□□□□ -0.37
VPS8-216ENST00000463687 VASPP50552 380 aaPredicted RBP12.73□□□□□ -0.37
VPS8-216ENST00000463687 SSUH2Q9Y2M2 353 aa12.73□□□□□ -0.37
VPS8-216ENST00000463687 SHROOM4Q9ULL8 1493 aa12.7□□□□□ -0.38
VPS8-216ENST00000463687 PRKAR2AP13861 404 aaKnown RBP12.69□□□□□ -0.38
VPS8-216ENST00000463687 SPDYE1Q8NFV5 336 aaPredicted RBP12.69□□□□□ -0.38
VPS8-216ENST00000463687 VSIG10Q8N0Z9 540 aa12.67□□□□□ -0.38
VPS8-216ENST00000463687 PROM2Q8N271 834 aa12.67□□□□□ -0.38
VPS8-216ENST00000463687 UNC13AQ9UPW8 1703 aa12.67□□□□□ -0.38
VPS8-216ENST00000463687 PRKCSHP14314 528 aaPredicted RBP12.6□□□□□ -0.39
VPS8-216ENST00000463687 TAOK2Q9UL54 1235 aa12.6□□□□□ -0.39
VPS8-216ENST00000463687 IFNLR1Q8IU57 520 aaPredicted RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 119.2 ms