RNA–Protein interactions for RNA: ENST00000462862.1

ERCC4-203, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 3

Gene ERCC4, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-203ENST00000462862 LOC105371045A0A1W2PR82 267 aa6.48□□□□□ -1.37
ERCC4-203ENST00000462862 LCE2DQ5TA82 110 aaPredicted RBP6.48□□□□□ -1.37
ERCC4-203ENST00000462862 SLAIN1Q8ND83 568 aa6.48□□□□□ -1.37
ERCC4-203ENST00000462862 PDS5BQ9NTI5 1447 aa6.48□□□□□ -1.37
ERCC4-203ENST00000462862 TRIM26Q12899 539 aaPredicted RBP6.47□□□□□ -1.37
ERCC4-203ENST00000462862 MKRN3Q13064 507 aaKnown RBP6.47□□□□□ -1.37
ERCC4-203ENST00000462862 SOGA1O94964 1423 aa6.47□□□□□ -1.37
ERCC4-203ENST00000462862 CUX1P39880 1505 aa6.46□□□□□ -1.37
ERCC4-203ENST00000462862 CEP162Q5TB80 1403 aa6.46□□□□□ -1.38
ERCC4-203ENST00000462862 PRXQ9BXM0 1461 aa6.46□□□□□ -1.38
ERCC4-203ENST00000462862 FANCD2Q9BXW9 1451 aa6.46□□□□□ -1.38
ERCC4-203ENST00000462862 DNMBPQ6XZF7 1577 aa6.45□□□□□ -1.38
ERCC4-203ENST00000462862 PDAP1Q13442 181 aaKnown RBP6.45□□□□□ -1.38
ERCC4-203ENST00000462862 FAM9AQ8IZU1 332 aaPredicted RBP6.43□□□□□ -1.38
ERCC4-203ENST00000462862 PDCD7Q8N8D1 485 aaKnown RBP6.43□□□□□ -1.38
ERCC4-203ENST00000462862 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.43□□□□□ -1.38
ERCC4-203ENST00000462862 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.43□□□□□ -1.38
ERCC4-203ENST00000462862 ABCA10Q8WWZ4 1543 aa6.42□□□□□ -1.38
ERCC4-203ENST00000462862 L3MBTL3Q96JM7 780 aaPredicted RBP6.42□□□□□ -1.38
ERCC4-203ENST00000462862 WDR97A6NE52 1622 aa6.42□□□□□ -1.38
ERCC4-203ENST00000462862 CABP2Q9NPB3 220 aa6.41□□□□□ -1.38
ERCC4-203ENST00000462862 UBTFP17480 764 aaKnown RBP6.4□□□□□ -1.38
ERCC4-203ENST00000462862 CLIP1P30622 1438 aa6.4□□□□□ -1.39
ERCC4-203ENST00000462862 FGD5Q6ZNL6 1462 aa6.4□□□□□ -1.39
ERCC4-203ENST00000462862 TOPBP1Q92547 1522 aa6.4□□□□□ -1.39
ERCC4-203ENST00000462862 ST18O60284 1047 aa6.39□□□□□ -1.39
ERCC4-203ENST00000462862 ZEB1P37275 1124 aaPredicted RBP6.39□□□□□ -1.39
ERCC4-203ENST00000462862 VPS8Q8N3P4 1428 aa6.39□□□□□ -1.39
ERCC4-203ENST00000462862 RAPGEF2Q9Y4G8 1499 aa6.39□□□□□ -1.39
ERCC4-203ENST00000462862 CUL7Q14999 1698 aa6.39□□□□□ -1.39
ERCC4-203ENST00000462862 ILDR1Q86SU0 546 aaPredicted RBP6.38□□□□□ -1.39
ERCC4-203ENST00000462862 CUX2O14529 1486 aa6.38□□□□□ -1.39
ERCC4-203ENST00000462862 RUSC2Q8N2Y8 1516 aa6.38□□□□□ -1.39
ERCC4-203ENST00000462862 POLA1P09884 1462 aaPredicted RBP6.37□□□□□ -1.39
ERCC4-203ENST00000462862 SNPHO15079 494 aa6.37□□□□□ -1.39
ERCC4-203ENST00000462862 DPY19L2Q6NUT2 758 aa6.37□□□□□ -1.39
ERCC4-203ENST00000462862 C3orf67Q6ZVT6 689 aa6.37□□□□□ -1.39
ERCC4-203ENST00000462862 IGF1RP08069 1367 aa6.36□□□□□ -1.39
ERCC4-203ENST00000462862 CARMIL1Q5VZK9 1371 aa6.35□□□□□ -1.39
ERCC4-203ENST00000462862 HRCP23327 699 aa6.35□□□□□ -1.39
ERCC4-203ENST00000462862 PCGF6Q9BYE7 350 aa6.35□□□□□ -1.39
ERCC4-203ENST00000462862 EFCAB5A4FU69 1503 aa6.35□□□□□ -1.39
ERCC4-203ENST00000462862 MAP3K1Q13233 1512 aa6.35□□□□□ -1.39
ERCC4-203ENST00000462862 MRC2Q9UBG0 1479 aa6.34□□□□□ -1.39
ERCC4-203ENST00000462862 CDAN1Q8IWY9 1227 aa6.34□□□□□ -1.39
ERCC4-203ENST00000462862 EFCAB3Q8N7B9 438 aa6.34□□□□□ -1.39
ERCC4-203ENST00000462862 FHAD1B1AJZ9 1412 aa6.33□□□□□ -1.4
ERCC4-203ENST00000462862 G3V3G9 751 aa6.33□□□□□ -1.4
ERCC4-203ENST00000462862 RIOK3O14730 519 aaKnown RBP6.33□□□□□ -1.4
ERCC4-203ENST00000462862 RNF25Q96BH1 459 aaPredicted RBP6.33□□□□□ -1.4
ERCC4-203ENST00000462862 BOLA1Q9Y3E2 137 aa6.33□□□□□ -1.4
ERCC4-203ENST00000462862 ABCA5Q8WWZ7 1642 aa6.32□□□□□ -1.4
ERCC4-203ENST00000462862 URB2Q14146 1524 aaKnown RBP6.32□□□□□ -1.4
ERCC4-203ENST00000462862 WDR62O43379 1518 aa6.31□□□□□ -1.4
ERCC4-203ENST00000462862 IFT140Q96RY7 1462 aa6.31□□□□□ -1.4
ERCC4-203ENST00000462862 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.31□□□□□ -1.4
ERCC4-203ENST00000462862 VGFO15240 615 aaPredicted RBP6.31□□□□□ -1.4
ERCC4-203ENST00000462862 ZFP91Q96JP5 570 aaPredicted RBP6.31□□□□□ -1.4
ERCC4-203ENST00000462862 TMEM121BQ9BXQ6 578 aaPredicted RBP6.31□□□□□ -1.4
ERCC4-203ENST00000462862 NESP48681 1621 aa6.31□□□□□ -1.4
ERCC4-203ENST00000462862 AQRO60306 1485 aaKnown RBP eCLIP6.3□□□□□ -1.4
ERCC4-203ENST00000462862 GAPVD1Q14C86 1478 aa6.3□□□□□ -1.4
ERCC4-203ENST00000462862 SOX12O15370 315 aa6.29□□□□□ -1.4
ERCC4-203ENST00000462862 MARVELD3Q96A59 401 aa6.29□□□□□ -1.4
ERCC4-203ENST00000462862 FMN1Q68DA7 1419 aa6.28□□□□□ -1.4
ERCC4-203ENST00000462862 TARBP1Q13395 1621 aaKnown RBP6.28□□□□□ -1.4
ERCC4-203ENST00000462862 GRIN2BQ13224 1484 aa6.28□□□□□ -1.4
ERCC4-203ENST00000462862 ARAP1Q96P48 1450 aa6.28□□□□□ -1.4
ERCC4-203ENST00000462862 THOC2Q8NI27 1593 aaKnown RBP6.27□□□□□ -1.41
ERCC4-203ENST00000462862 ARHGAP35Q9NRY4 1499 aa6.27□□□□□ -1.41
ERCC4-203ENST00000462862 KIF21AQ7Z4S6 1674 aa6.26□□□□□ -1.41
ERCC4-203ENST00000462862 FYCO1Q9BQS8 1478 aa6.26□□□□□ -1.41
ERCC4-203ENST00000462862 RAD54L2Q9Y4B4 1467 aa6.26□□□□□ -1.41
ERCC4-203ENST00000462862 ECM2O94769 699 aaPredicted RBP6.25□□□□□ -1.41
ERCC4-203ENST00000462862 TAOK2Q9UL54 1235 aa6.25□□□□□ -1.41
ERCC4-203ENST00000462862 PHF8Q9UPP1 1060 aa6.25□□□□□ -1.41
ERCC4-203ENST00000462862 CTTNBP2Q8WZ74 1663 aa6.25□□□□□ -1.41
ERCC4-203ENST00000462862 CLSPNQ9HAW4 1339 aa6.25□□□□□ -1.41
ERCC4-203ENST00000462862 ERCC6Q03468 1493 aa6.24□□□□□ -1.41
ERCC4-203ENST00000462862 MAGI1Q96QZ7 1491 aaPredicted RBP6.24□□□□□ -1.41
ERCC4-203ENST00000462862 EMP3P54852 163 aa6.24□□□□□ -1.41
ERCC4-203ENST00000462862 MS4A4AQ96JQ5 239 aa6.24□□□□□ -1.41
ERCC4-203ENST00000462862 ADAMTS12P58397 1594 aa6.23□□□□□ -1.41
ERCC4-203ENST00000462862 MICALL2Q8IY33 904 aa6.23□□□□□ -1.41
ERCC4-203ENST00000462862 BCL11BQ9C0K0 894 aaPredicted RBP6.23□□□□□ -1.41
ERCC4-203ENST00000462862 STK24Q9Y6E0 443 aa6.23□□□□□ -1.41
ERCC4-203ENST00000462862 CASKIN1Q8WXD9 1431 aa6.23□□□□□ -1.41
ERCC4-203ENST00000462862 RRBP1Q9P2E9 1410 aaKnown RBP6.23□□□□□ -1.41
ERCC4-203ENST00000462862 ACIN1Q9UKV3 1341 aaKnown RBP6.23□□□□□ -1.41
ERCC4-203ENST00000462862 SAMD9Q5K651 1589 aa6.23□□□□□ -1.41
ERCC4-203ENST00000462862 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.22□□□□□ -1.41
ERCC4-203ENST00000462862 FAM205CA6NFA0 338 aa6.22□□□□□ -1.41
ERCC4-203ENST00000462862 HOXB3P14651 431 aaPredicted RBP6.22□□□□□ -1.41
ERCC4-203ENST00000462862 PBRM1Q86U86 1689 aa6.22□□□□□ -1.41
ERCC4-203ENST00000462862 NLRP6P59044 892 aa6.21□□□□□ -1.42
ERCC4-203ENST00000462862 PKD2Q13563 968 aa6.21□□□□□ -1.42
ERCC4-203ENST00000462862 ZNF710Q8N1W2 664 aa6.21□□□□□ -1.42
ERCC4-203ENST00000462862 TIAM1Q13009 1591 aa6.21□□□□□ -1.42
ERCC4-203ENST00000462862 CCDC18Q5T9S5 1454 aa6.21□□□□□ -1.42
ERCC4-203ENST00000462862 KIAA0586Q9BVV6 1533 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms