RNA–Protein interactions for RNA: ENST00000462862.1

ERCC4-203, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 3

Gene ERCC4, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-203ENST00000462862 AEBP2Q6ZN18 517 aaPredicted RBP13.91□□□□□ -0.18
ERCC4-203ENST00000462862 CHIC1Q5VXU3 224 aa13.23□□□□□ -0.29
ERCC4-203ENST00000462862 SENP3Q9H4L4 574 aaPredicted RBP11.85□□□□□ -0.51
ERCC4-203ENST00000462862 PHF23Q9BUL5 403 aaPredicted RBP11.73□□□□□ -0.53
ERCC4-203ENST00000462862 POTEDQ86YR6 584 aa11.13□□□□□ -0.63
ERCC4-203ENST00000462862 FOXD1Q16676 465 aa11.06□□□□□ -0.64
ERCC4-203ENST00000462862 PLPPR3Q6T4P5 718 aa10.59□□□□□ -0.71
ERCC4-203ENST00000462862 PPP6R1Q9UPN7 881 aa10.37□□□□□ -0.75
ERCC4-203ENST00000462862 ADRA2BP18089 450 aa10.34□□□□□ -0.75
ERCC4-203ENST00000462862 PIAS4Q8N2W9 510 aaPredicted RBP10.34□□□□□ -0.75
ERCC4-203ENST00000462862 MSH5O43196 834 aa10.33□□□□□ -0.76
ERCC4-203ENST00000462862 MAPK8IP2Q13387 824 aaPredicted RBP9.5□□□□□ -0.89
ERCC4-203ENST00000462862 SCAF1Q9H7N4 1312 aaKnown RBP9.46□□□□□ -0.9
ERCC4-203ENST00000462862 DMRT2Q9Y5R5 561 aa9.4□□□□□ -0.9
ERCC4-203ENST00000462862 PPP4R3CPQ6ZMV5 832 aa9.3□□□□□ -0.92
ERCC4-203ENST00000462862 CNKSR2Q8WXI2 1034 aa9.11□□□□□ -0.95
ERCC4-203ENST00000462862 HOXD11P31277 338 aaPredicted RBP9.07□□□□□ -0.96
ERCC4-203ENST00000462862 DCAF8L1A6NGE4 600 aa9.05□□□□□ -0.96
ERCC4-203ENST00000462862 NISCHQ9Y2I1 1504 aa9.04□□□□□ -0.96
ERCC4-203ENST00000462862 RNF216Q9NWF9 866 aaPredicted RBP9.01□□□□□ -0.97
ERCC4-203ENST00000462862 NCBP3Q53F19 620 aaKnown RBP8.94□□□□□ -0.98
ERCC4-203ENST00000462862 CACNB1Q02641 598 aaPredicted RBP8.87□□□□□ -0.99
ERCC4-203ENST00000462862 NPM3O75607 178 aaKnown RBP8.81□□□□□ -1
ERCC4-203ENST00000462862 RNF39Q9H2S5 420 aa8.81□□□□□ -1
ERCC4-203ENST00000462862 DNAJC5BQ9UF47 199 aa8.74□□□□□ -1.01
ERCC4-203ENST00000462862 C1QBPQ07021 282 aaKnown RBP8.69□□□□□ -1.02
ERCC4-203ENST00000462862 KCNA4P22459 653 aa8.67□□□□□ -1.02
ERCC4-203ENST00000462862 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.66□□□□□ -1.02
ERCC4-203ENST00000462862 POTEHQ6S545 545 aa8.48□□□□□ -1.05
ERCC4-203ENST00000462862 U3KPZ7 1027 aaPredicted RBP8.46□□□□□ -1.06
ERCC4-203ENST00000462862 SLC4A2P04920 1241 aa8.4□□□□□ -1.06
ERCC4-203ENST00000462862 SPINK5Q9NQ38 1064 aaPredicted RBP8.34□□□□□ -1.07
ERCC4-203ENST00000462862 CAPN15O75808 1086 aa8.33□□□□□ -1.08
ERCC4-203ENST00000462862 DSG3P32926 999 aa8.27□□□□□ -1.09
ERCC4-203ENST00000462862 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.23□□□□□ -1.09
ERCC4-203ENST00000462862 APLP2Q06481 763 aa8.23□□□□□ -1.09
ERCC4-203ENST00000462862 HNRNPUL2Q1KMD3 747 aaKnown RBP8.23□□□□□ -1.09
ERCC4-203ENST00000462862 TRHP20396 242 aaPredicted RBP8.22□□□□□ -1.09
ERCC4-203ENST00000462862 SAMD1Q6SPF0 538 aaPredicted RBP8.19□□□□□ -1.1
ERCC4-203ENST00000462862 SLC4A1APQ9BWU0 796 aaKnown RBP8.18□□□□□ -1.1
ERCC4-203ENST00000462862 ZNF219Q9P2Y4 722 aaPredicted RBP8.17□□□□□ -1.1
ERCC4-203ENST00000462862 ABCB7O75027 752 aa8.15□□□□□ -1.1
ERCC4-203ENST00000462862 MYCNP04198 464 aaPredicted RBP8.14□□□□□ -1.11
ERCC4-203ENST00000462862 FOXD4L1Q9NU39 408 aa8.07□□□□□ -1.12
ERCC4-203ENST00000462862 POLA2Q14181 598 aa8□□□□□ -1.13
ERCC4-203ENST00000462862 ATF5Q9Y2D1 282 aaPredicted RBP7.97□□□□□ -1.13
ERCC4-203ENST00000462862 ZBTB22O15209 634 aa7.96□□□□□ -1.14
ERCC4-203ENST00000462862 CCDC180Q9P1Z9 1646 aa7.92□□□□□ -1.14
ERCC4-203ENST00000462862 RBM42Q9BTD8 480 aaKnown RBP7.88□□□□□ -1.15
ERCC4-203ENST00000462862 ATXN8OSP0DMR3 200 aa7.82□□□□□ -1.16
ERCC4-203ENST00000462862 ZBTB12Q9Y330 459 aaPredicted RBP7.81□□□□□ -1.16
ERCC4-203ENST00000462862 OSCARQ8IYS5 282 aa7.72□□□□□ -1.17
ERCC4-203ENST00000462862 AKT1S1Q96B36 256 aa7.72□□□□□ -1.17
ERCC4-203ENST00000462862 CHRDL2Q6WN34 429 aa7.7□□□□□ -1.18
ERCC4-203ENST00000462862 FBLN2P98095 1184 aa7.65□□□□□ -1.18
ERCC4-203ENST00000462862 REM2Q8IYK8 340 aaPredicted RBP7.65□□□□□ -1.18
ERCC4-203ENST00000462862 ZCCHC6Q5VYS8 1495 aaKnown RBP7.64□□□□□ -1.19
ERCC4-203ENST00000462862 CSRNP3Q8WYN3 585 aa7.63□□□□□ -1.19
ERCC4-203ENST00000462862 DCAF1Q9Y4B6 1507 aa7.62□□□□□ -1.19
ERCC4-203ENST00000462862 MKRN4PQ13434 485 aaPredicted RBP7.59□□□□□ -1.19
ERCC4-203ENST00000462862 SPDYE2BA6NHP3 402 aa7.58□□□□□ -1.2
ERCC4-203ENST00000462862 SPDYE6P0CI01 402 aa7.58□□□□□ -1.2
ERCC4-203ENST00000462862 SPDYE2Q495Y8 402 aa7.58□□□□□ -1.2
ERCC4-203ENST00000462862 PITPNM1O00562 1244 aa7.55□□□□□ -1.2
ERCC4-203ENST00000462862 EHMT2Q96KQ7 1210 aa7.55□□□□□ -1.2
ERCC4-203ENST00000462862 MYO15BQ96JP2 1530 aa7.53□□□□□ -1.2
ERCC4-203ENST00000462862 PIP4P2Q8N4L2 257 aa7.52□□□□□ -1.21
ERCC4-203ENST00000462862 ZNF692Q9BU19 519 aaPredicted RBP7.52□□□□□ -1.21
ERCC4-203ENST00000462862 FXR2P51116 673 aaKnown RBP eCLIP7.49□□□□□ -1.21
ERCC4-203ENST00000462862 SSUH2Q9Y2M2 353 aa7.47□□□□□ -1.21
ERCC4-203ENST00000462862 CLEC11AQ9Y240 323 aa7.46□□□□□ -1.22
ERCC4-203ENST00000462862 SPDYE1Q8NFV5 336 aaPredicted RBP7.45□□□□□ -1.22
ERCC4-203ENST00000462862 PLSCR2Q9NRY7 297 aa7.43□□□□□ -1.22
ERCC4-203ENST00000462862 HAX1O00165 279 aa7.41□□□□□ -1.22
ERCC4-203ENST00000462862 PABPN1Q86U42 306 aaKnown RBP eCLIP7.4□□□□□ -1.22
ERCC4-203ENST00000462862 SP7Q8TDD2 431 aaPredicted RBP7.39□□□□□ -1.23
ERCC4-203ENST00000462862 PRKAR2AP13861 404 aaKnown RBP7.38□□□□□ -1.23
ERCC4-203ENST00000462862 NACADO15069 1562 aa7.36□□□□□ -1.23
ERCC4-203ENST00000462862 PRR29P0C7W0 189 aa7.33□□□□□ -1.24
ERCC4-203ENST00000462862 EVX2Q03828 476 aa7.31□□□□□ -1.24
ERCC4-203ENST00000462862 CHADLQ6NUI6 762 aa7.31□□□□□ -1.24
ERCC4-203ENST00000462862 C19orf67A6NJJ6 358 aa7.25□□□□□ -1.25
ERCC4-203ENST00000462862 SPDYE4A6NLX3 237 aa7.25□□□□□ -1.25
ERCC4-203ENST00000462862 RB1CC1Q8TDY2 1594 aa7.24□□□□□ -1.25
ERCC4-203ENST00000462862 DCAF8L2P0C7V8 631 aa7.23□□□□□ -1.25
ERCC4-203ENST00000462862 SHROOM4Q9ULL8 1493 aa7.21□□□□□ -1.26
ERCC4-203ENST00000462862 STAG3Q9UJ98 1225 aa7.2□□□□□ -1.26
ERCC4-203ENST00000462862 FARP1Q9Y4F1 1045 aaPredicted RBP7.19□□□□□ -1.26
ERCC4-203ENST00000462862 ABCC9O60706 1549 aa7.18□□□□□ -1.26
ERCC4-203ENST00000462862 GABBR2O75899 941 aa7.14□□□□□ -1.27
ERCC4-203ENST00000462862 CREBZFQ9NS37 354 aa7.14□□□□□ -1.27
ERCC4-203ENST00000462862 CD44P16070 742 aaKnown RBP7.13□□□□□ -1.27
ERCC4-203ENST00000462862 SCRIBQ14160 1630 aa7.11□□□□□ -1.27
ERCC4-203ENST00000462862 PROM2Q8N271 834 aa7.06□□□□□ -1.28
ERCC4-203ENST00000462862 ZRANB1Q9UGI0 708 aa7.05□□□□□ -1.28
ERCC4-203ENST00000462862 SUPT5HO00267 1087 aaKnown RBP7.04□□□□□ -1.28
ERCC4-203ENST00000462862 CLCN6P51797 869 aa7.03□□□□□ -1.28
ERCC4-203ENST00000462862 BAZ1AQ9NRL2 1556 aaPredicted RBP7.03□□□□□ -1.28
ERCC4-203ENST00000462862 NPM1P06748 294 aaKnown RBP eCLIP7.02□□□□□ -1.29
ERCC4-203ENST00000462862 MNX1P50219 401 aaPredicted RBP7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms