RNA–Protein interactions for RNA: ENST00000462279.5

ERCC8-204, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 5

Gene ERCC8, Length 3,424 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-204ENST00000462279 ZNF326Q5BKZ1 582 aaKnown RBP10.76□□□□□ -0.69
ERCC8-204ENST00000462279 TMC1Q8TDI8 760 aa10.76□□□□□ -0.69
ERCC8-204ENST00000462279 KIF21AQ7Z4S6 1674 aa10.75□□□□□ -0.69
ERCC8-204ENST00000462279 NCOA2Q15596 1464 aa10.75□□□□□ -0.69
ERCC8-204ENST00000462279 HFM1A2PYH4 1435 aa10.75□□□□□ -0.69
ERCC8-204ENST00000462279 FRAT1Q92837 279 aaPredicted RBP10.74□□□□□ -0.69
ERCC8-204ENST00000462279 BACH2Q9BYV9 841 aa10.74□□□□□ -0.69
ERCC8-204ENST00000462279 SAMD9Q5K651 1589 aa10.74□□□□□ -0.69
ERCC8-204ENST00000462279 NFKBIBQ15653 356 aa10.74□□□□□ -0.69
ERCC8-204ENST00000462279 NAIPQ13075 1403 aa10.74□□□□□ -0.69
ERCC8-204ENST00000462279 RNF123Q5XPI4 1314 aa10.73□□□□□ -0.69
ERCC8-204ENST00000462279 NCOA1Q15788 1441 aa10.73□□□□□ -0.69
ERCC8-204ENST00000462279 FMN1Q68DA7 1419 aa10.73□□□□□ -0.69
ERCC8-204ENST00000462279 NBPF8Q3BBV2 869 aa10.73□□□□□ -0.69
ERCC8-204ENST00000462279 CC2D2AQ9P2K1 1620 aa10.73□□□□□ -0.69
ERCC8-204ENST00000462279 GCC2Q8IWJ2 1684 aa10.72□□□□□ -0.69
ERCC8-204ENST00000462279 RRP1P56182 461 aaKnown RBP10.71□□□□□ -0.69
ERCC8-204ENST00000462279 PTPN23Q9H3S7 1636 aa10.71□□□□□ -0.69
ERCC8-204ENST00000462279 ARHGEF11O15085 1522 aa10.71□□□□□ -0.7
ERCC8-204ENST00000462279 MPHOSPH9Q99550 1183 aa10.71□□□□□ -0.7
ERCC8-204ENST00000462279 CUL7Q14999 1698 aa10.7□□□□□ -0.7
ERCC8-204ENST00000462279 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.7□□□□□ -0.7
ERCC8-204ENST00000462279 RCAN3Q9UKA8 241 aa10.7□□□□□ -0.7
ERCC8-204ENST00000462279 PLIN1O60240 522 aa10.69□□□□□ -0.7
ERCC8-204ENST00000462279 DDRGK1Q96HY6 314 aa10.69□□□□□ -0.7
ERCC8-204ENST00000462279 SNAPC4Q5SXM2 1469 aa10.68□□□□□ -0.7
ERCC8-204ENST00000462279 PNISRQ8TF01 805 aaKnown RBP10.68□□□□□ -0.7
ERCC8-204ENST00000462279 EFCAB5A4FU69 1503 aa10.67□□□□□ -0.7
ERCC8-204ENST00000462279 MS4A1P11836 297 aa10.66□□□□□ -0.7
ERCC8-204ENST00000462279 ABCA5Q8WWZ7 1642 aa10.66□□□□□ -0.7
ERCC8-204ENST00000462279 HECW1Q76N89 1606 aa10.66□□□□□ -0.7
ERCC8-204ENST00000462279 ARID3CA6NKF2 412 aa10.66□□□□□ -0.7
ERCC8-204ENST00000462279 FRAT2O75474 233 aaPredicted RBP10.66□□□□□ -0.7
ERCC8-204ENST00000462279 THOC2Q8NI27 1593 aaKnown RBP10.65□□□□□ -0.7
ERCC8-204ENST00000462279 DENND4BO75064 1496 aaPredicted RBP10.65□□□□□ -0.7
ERCC8-204ENST00000462279 ARXQ96QS3 562 aa10.65□□□□□ -0.7
ERCC8-204ENST00000462279 FYCO1Q9BQS8 1478 aa10.64□□□□□ -0.71
ERCC8-204ENST00000462279 CASKIN1Q8WXD9 1431 aa10.64□□□□□ -0.71
ERCC8-204ENST00000462279 RSPH6AQ9H0K4 717 aa10.64□□□□□ -0.71
ERCC8-204ENST00000462279 FGD5Q6ZNL6 1462 aa10.63□□□□□ -0.71
ERCC8-204ENST00000462279 DCAF11Q8TEB1 546 aa10.63□□□□□ -0.71
ERCC8-204ENST00000462279 CDCA7LQ96GN5 454 aa10.63□□□□□ -0.71
ERCC8-204ENST00000462279 SLC4A1APQ9BWU0 796 aaKnown RBP10.63□□□□□ -0.71
ERCC8-204ENST00000462279 DHX29Q7Z478 1369 aaKnown RBP10.62□□□□□ -0.71
ERCC8-204ENST00000462279 MYOM3Q5VTT5 1437 aa10.62□□□□□ -0.71
ERCC8-204ENST00000462279 PKNOX2Q96KN3 472 aa10.61□□□□□ -0.71
ERCC8-204ENST00000462279 CRBNQ96SW2 442 aa10.61□□□□□ -0.71
ERCC8-204ENST00000462279 DNMBPQ6XZF7 1577 aa10.61□□□□□ -0.71
ERCC8-204ENST00000462279 ABCA10Q8WWZ4 1543 aa10.6□□□□□ -0.71
ERCC8-204ENST00000462279 FAM43AQ8N2R8 423 aa10.59□□□□□ -0.71
ERCC8-204ENST00000462279 RGS3P49796 1198 aa10.59□□□□□ -0.71
ERCC8-204ENST00000462279 USP47Q96K76 1375 aa10.58□□□□□ -0.72
ERCC8-204ENST00000462279 SPATA31E1Q6ZUB1 1445 aa10.58□□□□□ -0.72
ERCC8-204ENST00000462279 KDM6BO15054 1643 aa10.57□□□□□ -0.72
ERCC8-204ENST00000462279 VSIG10Q8N0Z9 540 aa10.56□□□□□ -0.72
ERCC8-204ENST00000462279 C20orf194Q5TEA3 1177 aa10.56□□□□□ -0.72
ERCC8-204ENST00000462279 POGKQ9P215 609 aa10.55□□□□□ -0.72
ERCC8-204ENST00000462279 ANKRD30BQ9BXX2 1392 aa10.55□□□□□ -0.72
ERCC8-204ENST00000462279 GRIN2BQ13224 1484 aa10.55□□□□□ -0.72
ERCC8-204ENST00000462279 GLIPR1L2Q4G1C9 344 aa10.55□□□□□ -0.72
ERCC8-204ENST00000462279 KDM2AQ9Y2K7 1162 aa10.55□□□□□ -0.72
ERCC8-204ENST00000462279 NAP1L5Q96NT1 182 aaPredicted RBP10.54□□□□□ -0.72
ERCC8-204ENST00000462279 MYBBP1AQ9BQG0 1328 aaKnown RBP10.54□□□□□ -0.72
ERCC8-204ENST00000462279 TCOF1Q13428 1488 aaKnown RBP10.54□□□□□ -0.72
ERCC8-204ENST00000462279 MAGI3Q5TCQ9 1506 aa10.54□□□□□ -0.72
ERCC8-204ENST00000462279 CARD11Q9BXL7 1154 aa10.54□□□□□ -0.72
ERCC8-204ENST00000462279 RPRD2Q5VT52 1461 aaKnown RBP10.54□□□□□ -0.72
ERCC8-204ENST00000462279 SLKQ9H2G2 1235 aaPredicted RBP10.54□□□□□ -0.72
ERCC8-204ENST00000462279 UGGT2Q9NYU1 1516 aa10.53□□□□□ -0.72
ERCC8-204ENST00000462279 FAM161AQ3B820 660 aa10.53□□□□□ -0.72
ERCC8-204ENST00000462279 RRAGDQ9NQL2 400 aaPredicted RBP10.53□□□□□ -0.72
ERCC8-204ENST00000462279 KIF15Q9NS87 1388 aa10.52□□□□□ -0.72
ERCC8-204ENST00000462279 SUPT6HQ7KZ85 1726 aaKnown RBP10.52□□□□□ -0.73
ERCC8-204ENST00000462279 ST20-MTHFSA0A0A6YYL1 179 aa10.52□□□□□ -0.73
ERCC8-204ENST00000462279 TEX14Q8IWB6 1497 aa10.52□□□□□ -0.73
ERCC8-204ENST00000462279 PDE3BQ13370 1112 aa10.51□□□□□ -0.73
ERCC8-204ENST00000462279 BRD4O60885 1362 aaPredicted RBP10.51□□□□□ -0.73
ERCC8-204ENST00000462279 LRPPRCP42704 1394 aaKnown RBP10.51□□□□□ -0.73
ERCC8-204ENST00000462279 RALBP1Q15311 655 aa10.51□□□□□ -0.73
ERCC8-204ENST00000462279 C8orf34Q49A92 452 aa10.51□□□□□ -0.73
ERCC8-204ENST00000462279 MIA2Q96PC5 1412 aa10.51□□□□□ -0.73
ERCC8-204ENST00000462279 CC2D1BQ5T0F9 858 aaKnown RBP10.5□□□□□ -0.73
ERCC8-204ENST00000462279 PBRM1Q86U86 1689 aa10.5□□□□□ -0.73
ERCC8-204ENST00000462279 TARBP1Q13395 1621 aaKnown RBP10.5□□□□□ -0.73
ERCC8-204ENST00000462279 ZMYND15Q9H091 742 aa10.5□□□□□ -0.73
ERCC8-204ENST00000462279 BCORL1Q5H9F3 1711 aa10.5□□□□□ -0.73
ERCC8-204ENST00000462279 LAMC3Q9Y6N6 1575 aa10.5□□□□□ -0.73
ERCC8-204ENST00000462279 NLRP13Q86W25 1043 aa10.49□□□□□ -0.73
ERCC8-204ENST00000462279 RAD54L2Q9Y4B4 1467 aa10.49□□□□□ -0.73
ERCC8-204ENST00000462279 CROCC2H7BZ55 1655 aa10.49□□□□□ -0.73
ERCC8-204ENST00000462279 KTN1Q86UP2 1357 aaKnown RBP10.49□□□□□ -0.73
ERCC8-204ENST00000462279 CENPQQ7L2Z9 268 aaPredicted RBP10.49□□□□□ -0.73
ERCC8-204ENST00000462279 GZF1Q9H116 711 aaPredicted RBP10.48□□□□□ -0.73
ERCC8-204ENST00000462279 ARID4BQ4LE39 1312 aaPredicted RBP10.48□□□□□ -0.73
ERCC8-204ENST00000462279 ZNF644Q9H582 1327 aaPredicted RBP10.48□□□□□ -0.73
ERCC8-204ENST00000462279 PNNQ9H307 717 aaKnown RBP10.48□□□□□ -0.73
ERCC8-204ENST00000462279 E9PCH4 1651 aa10.47□□□□□ -0.73
ERCC8-204ENST00000462279 HSP90AA2PQ14568 343 aaPredicted RBP10.47□□□□□ -0.73
ERCC8-204ENST00000462279 ROCK2O75116 1388 aaKnown RBP10.47□□□□□ -0.73
ERCC8-204ENST00000462279 PKD2Q13563 968 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms