RNA–Protein interactions for RNA: ENST00000461194.5

NUP50-212, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-212ENST00000461194 BMP2KQ9NSY1 1161 aaPredicted RBP12.17□□□□□ -0.46
NUP50-212ENST00000461194 GOLGA2Q08379 1002 aa12.16□□□□□ -0.46
NUP50-212ENST00000461194 GTPBP6O43824 516 aaPredicted RBP12.14□□□□□ -0.47
NUP50-212ENST00000461194 HAP1P54257 671 aaPredicted RBP12.14□□□□□ -0.47
NUP50-212ENST00000461194 POLA1P09884 1462 aaPredicted RBP12.14□□□□□ -0.47
NUP50-212ENST00000461194 ZNF608Q9ULD9 1512 aaPredicted RBP12.13□□□□□ -0.47
NUP50-212ENST00000461194 SP7Q8TDD2 431 aaPredicted RBP12.13□□□□□ -0.47
NUP50-212ENST00000461194 CUX1P39880 1505 aa12.11□□□□□ -0.47
NUP50-212ENST00000461194 SOGA1O94964 1423 aa12.11□□□□□ -0.47
NUP50-212ENST00000461194 MKRN3Q13064 507 aaKnown RBP12.1□□□□□ -0.47
NUP50-212ENST00000461194 DCBLD2Q96PD2 775 aa12.1□□□□□ -0.47
NUP50-212ENST00000461194 SOX12O15370 315 aa12.09□□□□□ -0.47
NUP50-212ENST00000461194 ATMINO43313 823 aaPredicted RBP12.09□□□□□ -0.47
NUP50-212ENST00000461194 ATN1P54259 1190 aaPredicted RBP12.09□□□□□ -0.47
NUP50-212ENST00000461194 TRIM35Q9UPQ4 493 aa12.09□□□□□ -0.47
NUP50-212ENST00000461194 FGD5Q6ZNL6 1462 aa12.08□□□□□ -0.47
NUP50-212ENST00000461194 RAD54L2Q9Y4B4 1467 aa12.08□□□□□ -0.47
NUP50-212ENST00000461194 TARBP1Q13395 1621 aaKnown RBP12.08□□□□□ -0.48
NUP50-212ENST00000461194 MFRPQ9BY79 579 aa12.08□□□□□ -0.48
NUP50-212ENST00000461194 RYDENQ9NUL5 291 aaKnown RBP12.08□□□□□ -0.48
NUP50-212ENST00000461194 PHF8Q9UPP1 1060 aa12.07□□□□□ -0.48
NUP50-212ENST00000461194 AQRO60306 1485 aaKnown RBP eCLIP12.07□□□□□ -0.48
NUP50-212ENST00000461194 NLRP6P59044 892 aa12.06□□□□□ -0.48
NUP50-212ENST00000461194 ASTLQ6HA08 431 aaPredicted RBP12.05□□□□□ -0.48
NUP50-212ENST00000461194 TSHZ2Q9NRE2 1034 aa12.05□□□□□ -0.48
NUP50-212ENST00000461194 TDRD9Q8NDG6 1382 aaKnown RBP12.05□□□□□ -0.48
NUP50-212ENST00000461194 EIF4G3O43432 1585 aaKnown RBP12.04□□□□□ -0.48
NUP50-212ENST00000461194 WRNQ14191 1432 aaPredicted RBP eCLIP12.03□□□□□ -0.48
NUP50-212ENST00000461194 FBXO22Q8NEZ5 403 aa12.02□□□□□ -0.49
NUP50-212ENST00000461194 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.01□□□□□ -0.494e-6■□□□□ 11.2
NUP50-212ENST00000461194 WDR97A6NE52 1622 aa12□□□□□ -0.49
NUP50-212ENST00000461194 PELP1Q8IZL8 1130 aaKnown RBP11.99□□□□□ -0.49
NUP50-212ENST00000461194 ABCA10Q8WWZ4 1543 aa11.98□□□□□ -0.49
NUP50-212ENST00000461194 TOP2BQ02880 1626 aa11.97□□□□□ -0.49
NUP50-212ENST00000461194 PPP1R37O75864 691 aa11.97□□□□□ -0.49
NUP50-212ENST00000461194 MS4A4AQ96JQ5 239 aa11.97□□□□□ -0.49
NUP50-212ENST00000461194 SYNJ1O43426 1573 aa11.96□□□□□ -0.49
NUP50-212ENST00000461194 POTEIP0CG38 1075 aa11.96□□□□□ -0.49
NUP50-212ENST00000461194 GRIN2BQ13224 1484 aa11.95□□□□□ -0.5
NUP50-212ENST00000461194 BIVM-ERCC5R4GMW8 1640 aa11.95□□□□□ -0.5
NUP50-212ENST00000461194 GAPVD1Q14C86 1478 aa11.95□□□□□ -0.5
NUP50-212ENST00000461194 SNAPC4Q5SXM2 1469 aa11.94□□□□□ -0.5
NUP50-212ENST00000461194 IER5LQ5T953 404 aa11.93□□□□□ -0.5
NUP50-212ENST00000461194 MAGI1Q96QZ7 1491 aaPredicted RBP11.93□□□□□ -0.5
NUP50-212ENST00000461194 DPY19L2Q6NUT2 758 aa11.91□□□□□ -0.5
NUP50-212ENST00000461194 VSIG10Q8N0Z9 540 aa11.91□□□□□ -0.5
NUP50-212ENST00000461194 CHMP7Q8WUX9 453 aaPredicted RBP11.91□□□□□ -0.5
NUP50-212ENST00000461194 OCEL1Q9H607 264 aa11.91□□□□□ -0.5
NUP50-212ENST00000461194 ABCA5Q8WWZ7 1642 aa11.9□□□□□ -0.5
NUP50-212ENST00000461194 SEC24BO95487 1268 aa11.9□□□□□ -0.5
NUP50-212ENST00000461194 IRX5P78411 483 aaPredicted RBP11.9□□□□□ -0.5
NUP50-212ENST00000461194 ILDR1Q86SU0 546 aaPredicted RBP11.9□□□□□ -0.5
NUP50-212ENST00000461194 SLC39A7Q92504 469 aa11.89□□□□□ -0.51
NUP50-212ENST00000461194 KDM2AQ9Y2K7 1162 aa11.89□□□□□ -0.51
NUP50-212ENST00000461194 SYNJ2O15056 1496 aa11.89□□□□□ -0.51
NUP50-212ENST00000461194 C7P10643 843 aa11.88□□□□□ -0.51
NUP50-212ENST00000461194 PLCG2P16885 1265 aa11.88□□□□□ -0.51
NUP50-212ENST00000461194 PDCD7Q8N8D1 485 aaKnown RBP11.87□□□□□ -0.51
NUP50-212ENST00000461194 COLQQ9Y215 455 aaPredicted RBP11.87□□□□□ -0.51
NUP50-212ENST00000461194 CHD1O14646 1710 aa11.86□□□□□ -0.51
NUP50-212ENST00000461194 METRNQ9UJH8 293 aa11.85□□□□□ -0.51
NUP50-212ENST00000461194 PBRM1Q86U86 1689 aa11.84□□□□□ -0.51
NUP50-212ENST00000461194 CADPS2Q86UW7 1296 aa11.83□□□□□ -0.52
NUP50-212ENST00000461194 ERICH3Q5RHP9 1530 aa11.82□□□□□ -0.52
NUP50-212ENST00000461194 FHAD1B1AJZ9 1412 aa11.82□□□□□ -0.52
NUP50-212ENST00000461194 ARHGEF11O15085 1522 aa11.81□□□□□ -0.52
NUP50-212ENST00000461194 POTEFA5A3E0 1075 aa11.8□□□□□ -0.52
NUP50-212ENST00000461194 CLASP1Q7Z460 1538 aa11.8□□□□□ -0.52
NUP50-212ENST00000461194 ADAMTS12P58397 1594 aa11.79□□□□□ -0.52
NUP50-212ENST00000461194 RIMBP3CA6NJZ7 1639 aa11.79□□□□□ -0.52
NUP50-212ENST00000461194 RIMBP3BA6NNM3 1639 aa11.79□□□□□ -0.52
NUP50-212ENST00000461194 RIMBP3Q9UFD9 1639 aa11.79□□□□□ -0.52
NUP50-212ENST00000461194 KIF27Q86VH2 1401 aa11.79□□□□□ -0.52
NUP50-212ENST00000461194 GRIN2AQ12879 1464 aa11.79□□□□□ -0.52
NUP50-212ENST00000461194 G3V3G9 751 aa11.78□□□□□ -0.52
NUP50-212ENST00000461194 IGF1RP08069 1367 aa11.78□□□□□ -0.52
NUP50-212ENST00000461194 L3MBTL3Q96JM7 780 aaPredicted RBP11.77□□□□□ -0.53
NUP50-212ENST00000461194 BOLA1Q9Y3E2 137 aa11.77□□□□□ -0.53
NUP50-212ENST00000461194 NUP160Q12769 1436 aa11.77□□□□□ -0.53
NUP50-212ENST00000461194 MICALL2Q8IY33 904 aa11.76□□□□□ -0.53
NUP50-212ENST00000461194 CYB5RLQ6IPT4 315 aa11.75□□□□□ -0.53
NUP50-212ENST00000461194 ARAP1Q96P48 1450 aa11.72□□□□□ -0.53
NUP50-212ENST00000461194 WDR70Q9NW82 654 aa11.72□□□□□ -0.53
NUP50-212ENST00000461194 CEP170Q5SW79 1584 aa11.71□□□□□ -0.53
NUP50-212ENST00000461194 TMEM121BQ9BXQ6 578 aaPredicted RBP11.71□□□□□ -0.53
NUP50-212ENST00000461194 PDE4AP27815 886 aa11.7□□□□□ -0.54
NUP50-212ENST00000461194 LARP6Q9BRS8 491 aaKnown RBP11.7□□□□□ -0.54
NUP50-212ENST00000461194 CARMIL1Q5VZK9 1371 aa11.69□□□□□ -0.54
NUP50-212ENST00000461194 NCKAP5LQ9HCH0 1330 aa11.68□□□□□ -0.54
NUP50-212ENST00000461194 JPH4Q96JJ6 628 aa11.67□□□□□ -0.54
NUP50-212ENST00000461194 CUL7Q14999 1698 aa11.66□□□□□ -0.54
NUP50-212ENST00000461194 CRISPLD2Q9H0B8 497 aa11.65□□□□□ -0.54
NUP50-212ENST00000461194 RUSC2Q8N2Y8 1516 aa11.65□□□□□ -0.55
NUP50-212ENST00000461194 TMC2Q8TDI7 906 aa11.64□□□□□ -0.55
NUP50-212ENST00000461194 KIAA0586Q9BVV6 1533 aa11.63□□□□□ -0.55
NUP50-212ENST00000461194 SHROOM2Q13796 1616 aa11.63□□□□□ -0.55
NUP50-212ENST00000461194 ERCC6L2Q5T890 1561 aa11.62□□□□□ -0.55
NUP50-212ENST00000461194 PRG4Q92954 1404 aaPredicted RBP11.62□□□□□ -0.55
NUP50-212ENST00000461194 C3orf67Q6ZVT6 689 aa11.62□□□□□ -0.55
NUP50-212ENST00000461194 GPHNQ9NQX3 736 aaPredicted RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms