RNA–Protein interactions for RNA: ENST00000460657.1

CPNE6-202, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 4,540 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-202ENST00000460657 CC2D1BQ5T0F9 858 aaKnown RBP15.91■□□□□ 0.14
CPNE6-202ENST00000460657 RALBP1Q15311 655 aa15.91■□□□□ 0.14
CPNE6-202ENST00000460657 WDR97A6NE52 1622 aa15.9■□□□□ 0.14
CPNE6-202ENST00000460657 NESP48681 1621 aa15.9■□□□□ 0.14
CPNE6-202ENST00000460657 ROCK2O75116 1388 aaKnown RBP15.9■□□□□ 0.14
CPNE6-202ENST00000460657 ABCA10Q8WWZ4 1543 aa15.89■□□□□ 0.13
CPNE6-202ENST00000460657 NUDCQ9Y266 331 aa15.89■□□□□ 0.13
CPNE6-202ENST00000460657 NOP58Q9Y2X3 529 aaKnown RBP15.89■□□□□ 0.13
CPNE6-202ENST00000460657 PCF11O94913 1555 aaKnown RBP15.89■□□□□ 0.13
CPNE6-202ENST00000460657 CC2D2AQ9P2K1 1620 aa15.88■□□□□ 0.13
CPNE6-202ENST00000460657 JPH4Q96JJ6 628 aa15.88■□□□□ 0.13
CPNE6-202ENST00000460657 KTN1Q86UP2 1357 aaKnown RBP15.88■□□□□ 0.13
CPNE6-202ENST00000460657 EHBP1L1Q8N3D4 1523 aa15.88■□□□□ 0.13
CPNE6-202ENST00000460657 AQRO60306 1485 aaKnown RBP eCLIP15.87■□□□□ 0.13
CPNE6-202ENST00000460657 ZBED9Q6R2W3 1325 aa15.87■□□□□ 0.13
CPNE6-202ENST00000460657 UPF2Q9HAU5 1272 aaKnown RBP15.87■□□□□ 0.13
CPNE6-202ENST00000460657 CCDC7Q96M83 1385 aa15.86■□□□□ 0.13
CPNE6-202ENST00000460657 DDRGK1Q96HY6 314 aa15.86■□□□□ 0.13
CPNE6-202ENST00000460657 WASHC2AQ641Q2 1341 aa15.86■□□□□ 0.13
CPNE6-202ENST00000460657 CNTLNQ9NXG0 1405 aa15.85■□□□□ 0.13
CPNE6-202ENST00000460657 RSPH4AQ5TD94 716 aa15.85■□□□□ 0.13
CPNE6-202ENST00000460657 HNRNPMP52272 730 aaKnown RBP eCLIP15.84■□□□□ 0.13
CPNE6-202ENST00000460657 USP47Q96K76 1375 aa15.84■□□□□ 0.13
CPNE6-202ENST00000460657 ZNF644Q9H582 1327 aaPredicted RBP15.83■□□□□ 0.13
CPNE6-202ENST00000460657 MIA2Q96PC5 1412 aa15.81■□□□□ 0.12
CPNE6-202ENST00000460657 NAIPQ13075 1403 aa15.81■□□□□ 0.12
CPNE6-202ENST00000460657 KIF15Q9NS87 1388 aa15.81■□□□□ 0.12
CPNE6-202ENST00000460657 RCAN3Q9UKA8 241 aa15.81■□□□□ 0.12
CPNE6-202ENST00000460657 KIF7Q2M1P5 1343 aa15.8■□□□□ 0.12
CPNE6-202ENST00000460657 SLC24A1O60721 1099 aa15.8■□□□□ 0.12
CPNE6-202ENST00000460657 NLRP13Q86W25 1043 aa15.8■□□□□ 0.12
CPNE6-202ENST00000460657 GRIN2BQ13224 1484 aa15.8■□□□□ 0.12
CPNE6-202ENST00000460657 ST20-MTHFSA0A0A6YYL1 179 aa15.8■□□□□ 0.12
CPNE6-202ENST00000460657 STAG3Q9UJ98 1225 aa15.79■□□□□ 0.12
CPNE6-202ENST00000460657 CUL7Q14999 1698 aa15.79■□□□□ 0.12
CPNE6-202ENST00000460657 SUPT6HQ7KZ85 1726 aaKnown RBP15.78■□□□□ 0.12
CPNE6-202ENST00000460657 MYBBP1AQ9BQG0 1328 aaKnown RBP15.77■□□□□ 0.11
CPNE6-202ENST00000460657 KANK1Q14678 1352 aa15.76■□□□□ 0.11
CPNE6-202ENST00000460657 EFCAB2Q5VUJ9 269 aa15.76■□□□□ 0.11
CPNE6-202ENST00000460657 CFAP53Q96M91 514 aa15.76■□□□□ 0.11
CPNE6-202ENST00000460657 PPM1GO15355 546 aaPredicted RBP15.76■□□□□ 0.11
CPNE6-202ENST00000460657 PDE3BQ13370 1112 aa15.76■□□□□ 0.11
CPNE6-202ENST00000460657 HECW1Q76N89 1606 aa15.75■□□□□ 0.11
CPNE6-202ENST00000460657 ARID4BQ4LE39 1312 aaPredicted RBP15.75■□□□□ 0.11
CPNE6-202ENST00000460657 MAPKBP1O60336 1514 aa15.74■□□□□ 0.11
CPNE6-202ENST00000460657 CCDC144AA2RUR9 1427 aa15.74■□□□□ 0.11
CPNE6-202ENST00000460657 PRDM2Q13029 1718 aa15.73■□□□□ 0.11
CPNE6-202ENST00000460657 BCL11AQ9H165 835 aa15.73■□□□□ 0.11
CPNE6-202ENST00000460657 TCERG1O14776 1098 aaKnown RBP15.72■□□□□ 0.11
CPNE6-202ENST00000460657 ANKRD50Q9ULJ7 1429 aa15.72■□□□□ 0.11
CPNE6-202ENST00000460657 FANCIQ9NVI1 1328 aa15.71■□□□□ 0.11
CPNE6-202ENST00000460657 EPRSP07814 1512 aaKnown RBP15.7■□□□□ 0.1
CPNE6-202ENST00000460657 NBPF8Q3BBV2 869 aa15.7■□□□□ 0.1
CPNE6-202ENST00000460657 PTPRGP23470 1445 aa15.7■□□□□ 0.1
CPNE6-202ENST00000460657 LAMC3Q9Y6N6 1575 aa15.69■□□□□ 0.1
CPNE6-202ENST00000460657 RGS3P49796 1198 aa15.69■□□□□ 0.1
CPNE6-202ENST00000460657 LAS1LQ9Y4W2 734 aaKnown RBP15.69■□□□□ 0.1
CPNE6-202ENST00000460657 BECN1Q14457 450 aa15.69■□□□□ 0.1
CPNE6-202ENST00000460657 NEUROD2Q15784 382 aa15.69■□□□□ 0.1
CPNE6-202ENST00000460657 ESF1Q9H501 851 aaKnown RBP15.68■□□□□ 0.1
CPNE6-202ENST00000460657 DAPK1P53355 1430 aa15.68■□□□□ 0.1
CPNE6-202ENST00000460657 MRC2Q9UBG0 1479 aa15.67■□□□□ 0.1
CPNE6-202ENST00000460657 PTPN23Q9H3S7 1636 aa15.67■□□□□ 0.1
CPNE6-202ENST00000460657 ROCK1Q13464 1354 aa15.66■□□□□ 0.1
CPNE6-202ENST00000460657 HSP90AA1P07900 732 aaKnown RBP15.65■□□□□ 0.1
CPNE6-202ENST00000460657 CDK13Q14004 1512 aaKnown RBP15.65■□□□□ 0.1
CPNE6-202ENST00000460657 TROQ12816 1431 aaPredicted RBP15.65■□□□□ 0.1
CPNE6-202ENST00000460657 IPO9Q96P70 1041 aaKnown RBP15.65■□□□□ 0.1
CPNE6-202ENST00000460657 IFT140Q96RY7 1462 aa15.65■□□□□ 0.1
CPNE6-202ENST00000460657 DEKP35659 375 aaKnown RBP15.65■□□□□ 0.1
CPNE6-202ENST00000460657 KIAA1107Q9UPP5 1409 aa15.64■□□□□ 0.09
CPNE6-202ENST00000460657 TNNT2P45379 298 aaPredicted RBP15.64■□□□□ 0.09
CPNE6-202ENST00000460657 PANK3Q9H999 370 aa15.64■□□□□ 0.09
CPNE6-202ENST00000460657 IQGAP2Q13576 1575 aa15.64■□□□□ 0.09
CPNE6-202ENST00000460657 FRAT1Q92837 279 aaPredicted RBP15.64■□□□□ 0.09
CPNE6-202ENST00000460657 RRP1P56182 461 aaKnown RBP15.63■□□□□ 0.09
CPNE6-202ENST00000460657 EIF3AQ14152 1382 aaKnown RBP15.63■□□□□ 0.09
CPNE6-202ENST00000460657 SPAG9O60271 1321 aaKnown RBP15.63■□□□□ 0.09
CPNE6-202ENST00000460657 URB2Q14146 1524 aaKnown RBP15.63■□□□□ 0.09
CPNE6-202ENST00000460657 PRG4Q92954 1404 aaPredicted RBP15.62■□□□□ 0.09
CPNE6-202ENST00000460657 MORC1Q86VD1 984 aa15.61■□□□□ 0.09
CPNE6-202ENST00000460657 GOLGA2Q08379 1002 aa15.61■□□□□ 0.09
CPNE6-202ENST00000460657 FTSJ3Q8IY81 847 aaKnown RBP15.61■□□□□ 0.09
CPNE6-202ENST00000460657 KIAA0586Q9BVV6 1533 aa15.6■□□□□ 0.09
CPNE6-202ENST00000460657 CCDC184Q52MB2 194 aa15.6■□□□□ 0.09
CPNE6-202ENST00000460657 SENP3Q9H4L4 574 aaPredicted RBP15.6■□□□□ 0.09
CPNE6-202ENST00000460657 ANKRD30BQ9BXX2 1392 aa15.6■□□□□ 0.09
CPNE6-202ENST00000460657 PTPRKQ15262 1439 aa15.59■□□□□ 0.09
CPNE6-202ENST00000460657 MAPK8IP3Q9UPT6 1336 aa15.59■□□□□ 0.09
CPNE6-202ENST00000460657 BRD4O60885 1362 aaPredicted RBP15.59■□□□□ 0.09
CPNE6-202ENST00000460657 KIF3BO15066 747 aa15.58■□□□□ 0.09
CPNE6-202ENST00000460657 EXOC6Q8TAG9 804 aa15.58■□□□□ 0.09
CPNE6-202ENST00000460657 CFAP43Q8NDM7 1665 aa15.58■□□□□ 0.08
CPNE6-202ENST00000460657 THOC2Q8NI27 1593 aaKnown RBP15.57■□□□□ 0.08
CPNE6-202ENST00000460657 SNAPC4Q5SXM2 1469 aa15.57■□□□□ 0.08
CPNE6-202ENST00000460657 AKNAQ7Z591 1439 aa15.56■□□□□ 0.08
CPNE6-202ENST00000460657 MS4A1P11836 297 aa15.56■□□□□ 0.08
CPNE6-202ENST00000460657 ABCC5O15440 1437 aa15.56■□□□□ 0.08
CPNE6-202ENST00000460657 C9orf84Q5VXU9 1444 aa15.56■□□□□ 0.08
CPNE6-202ENST00000460657 MYH16Q9H6N6 1097 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms