RNA–Protein interactions for RNA: ENST00000453246.5

ABCA13-205, Transcript of ATP binding cassette subfamily A member 13, humanhuman

TSL 2

Gene ABCA13, Length 4,275 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA13-205ENST00000453246 PLEKHG5O94827 1062 aa13□□□□□ -0.33
ABCA13-205ENST00000453246 ERICH6BQ5W0A0 696 aa12.99□□□□□ -0.33
ABCA13-205ENST00000453246 STAG3Q9UJ98 1225 aa12.99□□□□□ -0.33
ABCA13-205ENST00000453246 FYCO1Q9BQS8 1478 aa12.99□□□□□ -0.33
ABCA13-205ENST00000453246 ST20-MTHFSA0A0A6YYL1 179 aa12.98□□□□□ -0.33
ABCA13-205ENST00000453246 NUDCQ9Y266 331 aa12.97□□□□□ -0.33
ABCA13-205ENST00000453246 JPH4Q96JJ6 628 aa12.97□□□□□ -0.33
ABCA13-205ENST00000453246 LAS1LQ9Y4W2 734 aaKnown RBP12.97□□□□□ -0.33
ABCA13-205ENST00000453246 ROCK2O75116 1388 aaKnown RBP12.96□□□□□ -0.33
ABCA13-205ENST00000453246 NEUROD2Q15784 382 aa12.96□□□□□ -0.33
ABCA13-205ENST00000453246 POLA1P09884 1462 aaPredicted RBP12.96□□□□□ -0.33
ABCA13-205ENST00000453246 NEFMP07197 916 aa12.96□□□□□ -0.33
ABCA13-205ENST00000453246 TMF1P82094 1093 aa12.96□□□□□ -0.33
ABCA13-205ENST00000453246 CARMIL2Q6F5E8 1435 aa12.96□□□□□ -0.34
ABCA13-205ENST00000453246 AQRO60306 1485 aaKnown RBP eCLIP12.95□□□□□ -0.34
ABCA13-205ENST00000453246 NPM1P06748 294 aaKnown RBP eCLIP12.95□□□□□ -0.34
ABCA13-205ENST00000453246 KIF7Q2M1P5 1343 aa12.95□□□□□ -0.34
ABCA13-205ENST00000453246 CCDC7Q96M83 1385 aa12.95□□□□□ -0.34
ABCA13-205ENST00000453246 TNNT2P45379 298 aaPredicted RBP12.94□□□□□ -0.34
ABCA13-205ENST00000453246 RGS3P49796 1198 aa12.94□□□□□ -0.34
ABCA13-205ENST00000453246 CCDC184Q52MB2 194 aa12.94□□□□□ -0.34
ABCA13-205ENST00000453246 ARXQ96QS3 562 aa12.94□□□□□ -0.34
ABCA13-205ENST00000453246 RCAN3Q9UKA8 241 aa12.94□□□□□ -0.34
ABCA13-205ENST00000453246 ZBED9Q6R2W3 1325 aa12.93□□□□□ -0.34
ABCA13-205ENST00000453246 TOPBP1Q92547 1522 aa12.93□□□□□ -0.34
ABCA13-205ENST00000453246 CDCA8Q53HL2 280 aa12.93□□□□□ -0.34
ABCA13-205ENST00000453246 USP47Q96K76 1375 aa12.93□□□□□ -0.34
ABCA13-205ENST00000453246 HFM1A2PYH4 1435 aa12.93□□□□□ -0.34
ABCA13-205ENST00000453246 KTN1Q86UP2 1357 aaKnown RBP12.93□□□□□ -0.34
ABCA13-205ENST00000453246 NBPF8Q3BBV2 869 aa12.92□□□□□ -0.34
ABCA13-205ENST00000453246 RALBP1Q15311 655 aa12.91□□□□□ -0.34
ABCA13-205ENST00000453246 UPF2Q9HAU5 1272 aaKnown RBP12.91□□□□□ -0.34
ABCA13-205ENST00000453246 PCF11O94913 1555 aaKnown RBP12.9□□□□□ -0.34
ABCA13-205ENST00000453246 BIVM-ERCC5R4GMW8 1640 aa12.9□□□□□ -0.34
ABCA13-205ENST00000453246 NAIPQ13075 1403 aa12.89□□□□□ -0.35
ABCA13-205ENST00000453246 CNTLNQ9NXG0 1405 aa12.89□□□□□ -0.35
ABCA13-205ENST00000453246 A0A0G2JS52 829 aa12.89□□□□□ -0.35
ABCA13-205ENST00000453246 NLRP13Q86W25 1043 aa12.89□□□□□ -0.35
ABCA13-205ENST00000453246 EFCAB5A4FU69 1503 aa12.88□□□□□ -0.35
ABCA13-205ENST00000453246 DNAJC5BQ9UF47 199 aa12.88□□□□□ -0.35
ABCA13-205ENST00000453246 FRAT1Q92837 279 aaPredicted RBP12.87□□□□□ -0.35
ABCA13-205ENST00000453246 DDRGK1Q96HY6 314 aa12.87□□□□□ -0.35
ABCA13-205ENST00000453246 CC2D2AQ9P2K1 1620 aa12.86□□□□□ -0.35
ABCA13-205ENST00000453246 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.85□□□□□ -0.35
ABCA13-205ENST00000453246 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.85□□□□□ -0.35
ABCA13-205ENST00000453246 KIF15Q9NS87 1388 aa12.85□□□□□ -0.35
ABCA13-205ENST00000453246 MAPKBP1O60336 1514 aa12.84□□□□□ -0.35
ABCA13-205ENST00000453246 MYBBP1AQ9BQG0 1328 aaKnown RBP12.84□□□□□ -0.35
ABCA13-205ENST00000453246 C11orf95C9JLR9 678 aaPredicted RBP12.84□□□□□ -0.35
ABCA13-205ENST00000453246 PLIN1O60240 522 aa12.84□□□□□ -0.35
ABCA13-205ENST00000453246 MAP3K1Q13233 1512 aa12.83□□□□□ -0.36
ABCA13-205ENST00000453246 EXOC6Q8TAG9 804 aa12.83□□□□□ -0.36
ABCA13-205ENST00000453246 PANK3Q9H999 370 aa12.83□□□□□ -0.36
ABCA13-205ENST00000453246 ABCA10Q8WWZ4 1543 aa12.83□□□□□ -0.36
ABCA13-205ENST00000453246 DNMBPQ6XZF7 1577 aa12.82□□□□□ -0.36
ABCA13-205ENST00000453246 HSP90AA1P07900 732 aaKnown RBP12.82□□□□□ -0.36
ABCA13-205ENST00000453246 PPM1GO15355 546 aaPredicted RBP12.81□□□□□ -0.36
ABCA13-205ENST00000453246 EFCAB2Q5VUJ9 269 aa12.81□□□□□ -0.36
ABCA13-205ENST00000453246 FANCIQ9NVI1 1328 aa12.81□□□□□ -0.36
ABCA13-205ENST00000453246 CCDC144AA2RUR9 1427 aa12.81□□□□□ -0.36
ABCA13-205ENST00000453246 CFAP53Q96M91 514 aa12.8□□□□□ -0.36
ABCA13-205ENST00000453246 IPO9Q96P70 1041 aaKnown RBP12.8□□□□□ -0.36
ABCA13-205ENST00000453246 EHBP1L1Q8N3D4 1523 aa12.8□□□□□ -0.36
ABCA13-205ENST00000453246 ANKRD50Q9ULJ7 1429 aa12.8□□□□□ -0.36
ABCA13-205ENST00000453246 TCERG1O14776 1098 aaKnown RBP12.8□□□□□ -0.36
ABCA13-205ENST00000453246 CCDC146Q8IYE0 955 aa12.79□□□□□ -0.36
ABCA13-205ENST00000453246 PRDM2Q13029 1718 aa12.79□□□□□ -0.36
ABCA13-205ENST00000453246 CDK13Q14004 1512 aaKnown RBP12.79□□□□□ -0.36
ABCA13-205ENST00000453246 SAFB2Q14151 953 aaKnown RBP eCLIP12.79□□□□□ -0.36
ABCA13-205ENST00000453246 RRP1P56182 461 aaKnown RBP12.78□□□□□ -0.36
ABCA13-205ENST00000453246 PTPRKQ15262 1439 aa12.78□□□□□ -0.36
ABCA13-205ENST00000453246 RSPH4AQ5TD94 716 aa12.78□□□□□ -0.36
ABCA13-205ENST00000453246 PRG4Q92954 1404 aaPredicted RBP12.77□□□□□ -0.36
ABCA13-205ENST00000453246 PDE3BQ13370 1112 aa12.77□□□□□ -0.36
ABCA13-205ENST00000453246 KIF3BO15066 747 aa12.77□□□□□ -0.37
ABCA13-205ENST00000453246 GGT6Q6P531 493 aa12.77□□□□□ -0.37
ABCA13-205ENST00000453246 MIA2Q96PC5 1412 aa12.77□□□□□ -0.37
ABCA13-205ENST00000453246 PTPRGP23470 1445 aa12.76□□□□□ -0.37
ABCA13-205ENST00000453246 GRIN2BQ13224 1484 aa12.76□□□□□ -0.37
ABCA13-205ENST00000453246 U2SURPO15042 1029 aaKnown RBP12.76□□□□□ -0.37
ABCA13-205ENST00000453246 MORC1Q86VD1 984 aa12.76□□□□□ -0.37
ABCA13-205ENST00000453246 FTSJ3Q8IY81 847 aaKnown RBP12.76□□□□□ -0.37
ABCA13-205ENST00000453246 AKNAQ7Z591 1439 aa12.75□□□□□ -0.37
ABCA13-205ENST00000453246 BECN1Q14457 450 aa12.75□□□□□ -0.37
ABCA13-205ENST00000453246 GOLGA2Q08379 1002 aa12.75□□□□□ -0.37
ABCA13-205ENST00000453246 EPRSP07814 1512 aaKnown RBP12.75□□□□□ -0.37
ABCA13-205ENST00000453246 KANK1Q14678 1352 aa12.75□□□□□ -0.37
ABCA13-205ENST00000453246 MSH5O43196 834 aa12.74□□□□□ -0.37
ABCA13-205ENST00000453246 SUPT6HQ7KZ85 1726 aaKnown RBP12.74□□□□□ -0.37
ABCA13-205ENST00000453246 DAPK1P53355 1430 aa12.73□□□□□ -0.37
ABCA13-205ENST00000453246 SPAG9O60271 1321 aaKnown RBP12.73□□□□□ -0.37
ABCA13-205ENST00000453246 ZBTB7CA1YPR0 619 aa12.73□□□□□ -0.37
ABCA13-205ENST00000453246 NBPF1Q3BBV0 1214 aa12.73□□□□□ -0.37
ABCA13-205ENST00000453246 PDE4AP27815 886 aa12.73□□□□□ -0.37
ABCA13-205ENST00000453246 CRBNQ96SW2 442 aa12.73□□□□□ -0.37
ABCA13-205ENST00000453246 CDCA7LQ96GN5 454 aa12.72□□□□□ -0.37
ABCA13-205ENST00000453246 PNISRQ8TF01 805 aaKnown RBP12.71□□□□□ -0.37
ABCA13-205ENST00000453246 ANKRD30BQ9BXX2 1392 aa12.71□□□□□ -0.37
ABCA13-205ENST00000453246 MAPK8IP3Q9UPT6 1336 aa12.71□□□□□ -0.38
ABCA13-205ENST00000453246 POGKQ9P215 609 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms