RNA–Protein interactions for RNA: ENST00000452776.1

SMCO1-202, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

TSL 1 (best)

Gene SMCO1, Length 1,846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-202ENST00000452776 CNTLNQ9NXG0 1405 aa11.01□□□□□ -0.65
SMCO1-202ENST00000452776 TPM2P07951 284 aa11.01□□□□□ -0.65
SMCO1-202ENST00000452776 PRKRIP1Q9H875 184 aaPredicted RBP11.01□□□□□ -0.65
SMCO1-202ENST00000452776 ERICH3Q5RHP9 1530 aa11.01□□□□□ -0.65
SMCO1-202ENST00000452776 SYNJ1O43426 1573 aa11.01□□□□□ -0.65
SMCO1-202ENST00000452776 FAM9BQ8IZU0 186 aa11□□□□□ -0.65
SMCO1-202ENST00000452776 NCOA2Q15596 1464 aa11□□□□□ -0.65
SMCO1-202ENST00000452776 NCLP19338 710 aaKnown RBP11□□□□□ -0.65
SMCO1-202ENST00000452776 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.99□□□□□ -0.65
SMCO1-202ENST00000452776 RAPGEF2Q9Y4G8 1499 aa10.99□□□□□ -0.65
SMCO1-202ENST00000452776 FGD1P98174 961 aa10.99□□□□□ -0.65
SMCO1-202ENST00000452776 ARAP1Q96P48 1450 aa10.99□□□□□ -0.65
SMCO1-202ENST00000452776 MAP7D2Q96T17 732 aa10.98□□□□□ -0.65
SMCO1-202ENST00000452776 ABCB7O75027 752 aa10.98□□□□□ -0.65
SMCO1-202ENST00000452776 HIRIP3Q9BW71 556 aaPredicted RBP10.98□□□□□ -0.65
SMCO1-202ENST00000452776 EIF4G2P78344 907 aaKnown RBP eCLIP10.97□□□□□ -0.65
SMCO1-202ENST00000452776 RBM10P98175 930 aaKnown RBP10.97□□□□□ -0.65
SMCO1-202ENST00000452776 AAMPQ13685 434 aa10.96□□□□□ -0.65
SMCO1-202ENST00000452776 RRAGDQ9NQL2 400 aaPredicted RBP10.96□□□□□ -0.65
SMCO1-202ENST00000452776 TRHP20396 242 aaPredicted RBP10.95□□□□□ -0.66
SMCO1-202ENST00000452776 DCAF11Q8TEB1 546 aa10.95□□□□□ -0.66
SMCO1-202ENST00000452776 ISY1Q9ULR0 285 aaKnown RBP10.94□□□□□ -0.66
SMCO1-202ENST00000452776 SLC4A2P04920 1241 aa10.93□□□□□ -0.66
SMCO1-202ENST00000452776 PDE4CQ08493 712 aa10.93□□□□□ -0.66
SMCO1-202ENST00000452776 AKNAQ7Z591 1439 aa10.93□□□□□ -0.66
SMCO1-202ENST00000452776 PDE3BQ13370 1112 aa10.92□□□□□ -0.66
SMCO1-202ENST00000452776 TERF1P54274 439 aa10.91□□□□□ -0.66
SMCO1-202ENST00000452776 HSPA5P11021 654 aaKnown RBP10.91□□□□□ -0.66
SMCO1-202ENST00000452776 RRP1P56182 461 aaKnown RBP10.91□□□□□ -0.66
SMCO1-202ENST00000452776 MTERF4Q7Z6M4 381 aaKnown RBP10.91□□□□□ -0.66
SMCO1-202ENST00000452776 FRAT2O75474 233 aaPredicted RBP10.9□□□□□ -0.66
SMCO1-202ENST00000452776 PRXQ9BXM0 1461 aa10.89□□□□□ -0.67
SMCO1-202ENST00000452776 GOLGA6L3A6NEY3 463 aa10.89□□□□□ -0.67
SMCO1-202ENST00000452776 BECN1Q14457 450 aa10.88□□□□□ -0.67
SMCO1-202ENST00000452776 FAM161AQ3B820 660 aa10.88□□□□□ -0.67
SMCO1-202ENST00000452776 CCDC7Q96M83 1385 aa10.88□□□□□ -0.67
SMCO1-202ENST00000452776 UACAQ9BZF9 1416 aa10.88□□□□□ -0.67
SMCO1-202ENST00000452776 CCDC184Q52MB2 194 aa10.87□□□□□ -0.67
SMCO1-202ENST00000452776 NCOA1Q15788 1441 aa10.87□□□□□ -0.67
SMCO1-202ENST00000452776 PRDM4Q9UKN5 801 aa10.86□□□□□ -0.67
SMCO1-202ENST00000452776 RANGAP1P46060 587 aaPredicted RBP10.86□□□□□ -0.67
SMCO1-202ENST00000452776 MRE11P49959 708 aa10.86□□□□□ -0.67
SMCO1-202ENST00000452776 ARID4BQ4LE39 1312 aaPredicted RBP10.85□□□□□ -0.67
SMCO1-202ENST00000452776 SMAP1Q8IYB5 467 aaPredicted RBP10.85□□□□□ -0.67
SMCO1-202ENST00000452776 ZNF326Q5BKZ1 582 aaKnown RBP10.84□□□□□ -0.67
SMCO1-202ENST00000452776 EXOC6Q8TAG9 804 aa10.84□□□□□ -0.67
SMCO1-202ENST00000452776 RCAN3Q9UKA8 241 aa10.84□□□□□ -0.67
SMCO1-202ENST00000452776 FSD2A1L4K1 749 aa10.84□□□□□ -0.67
SMCO1-202ENST00000452776 KTN1Q86UP2 1357 aaKnown RBP10.83□□□□□ -0.68
SMCO1-202ENST00000452776 TIAM1Q13009 1591 aa10.83□□□□□ -0.68
SMCO1-202ENST00000452776 FAM50AQ14320 339 aaKnown RBP10.83□□□□□ -0.68
SMCO1-202ENST00000452776 LRRC9Q6ZRR7 1453 aa10.83□□□□□ -0.68
SMCO1-202ENST00000452776 A0A0U1RQG5 324 aaPredicted RBP10.82□□□□□ -0.68
SMCO1-202ENST00000452776 ESPNB1AK53 854 aa10.82□□□□□ -0.68
SMCO1-202ENST00000452776 PDIA4P13667 645 aaKnown RBP10.82□□□□□ -0.68
SMCO1-202ENST00000452776 CENPQQ7L2Z9 268 aaPredicted RBP10.82□□□□□ -0.68
SMCO1-202ENST00000452776 ABCA5Q8WWZ7 1642 aa10.82□□□□□ -0.68
SMCO1-202ENST00000452776 MYH16Q9H6N6 1097 aa10.81□□□□□ -0.68
SMCO1-202ENST00000452776 SMARCA4P51532 1647 aa10.81□□□□□ -0.68
SMCO1-202ENST00000452776 ZBTB22O15209 634 aa10.81□□□□□ -0.68
SMCO1-202ENST00000452776 XRCC6P12956 609 aaKnown RBP eCLIP10.81□□□□□ -0.68
SMCO1-202ENST00000452776 TRIM44Q96DX7 344 aaPredicted RBP10.81□□□□□ -0.68
SMCO1-202ENST00000452776 TNNT2P45379 298 aaPredicted RBP10.8□□□□□ -0.68
SMCO1-202ENST00000452776 UTP14CQ5TAP6 766 aaKnown RBP10.8□□□□□ -0.68
SMCO1-202ENST00000452776 PNISRQ8TF01 805 aaKnown RBP10.79□□□□□ -0.68
SMCO1-202ENST00000452776 TAF7LQ5H9L4 462 aa10.78□□□□□ -0.68
SMCO1-202ENST00000452776 FOXD4L1Q9NU39 408 aa10.78□□□□□ -0.68
SMCO1-202ENST00000452776 POGKQ9P215 609 aa10.78□□□□□ -0.68
SMCO1-202ENST00000452776 ARHGAP35Q9NRY4 1499 aa10.78□□□□□ -0.68
SMCO1-202ENST00000452776 HFM1A2PYH4 1435 aa10.78□□□□□ -0.68
SMCO1-202ENST00000452776 CCDC18Q5T9S5 1454 aa10.77□□□□□ -0.68
SMCO1-202ENST00000452776 INSRP06213 1382 aa10.77□□□□□ -0.68
SMCO1-202ENST00000452776 PTMSP20962 102 aa10.77□□□□□ -0.68
SMCO1-202ENST00000452776 SLC4A3P48751 1232 aa10.77□□□□□ -0.68
SMCO1-202ENST00000452776 TMC1Q8TDI8 760 aa10.77□□□□□ -0.68
SMCO1-202ENST00000452776 PHLDB1Q86UU1 1377 aa10.77□□□□□ -0.69
SMCO1-202ENST00000452776 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.77□□□□□ -0.69
SMCO1-202ENST00000452776 KDM5BQ9UGL1 1544 aa10.77□□□□□ -0.69
SMCO1-202ENST00000452776 ROCK2O75116 1388 aaKnown RBP10.76□□□□□ -0.69
SMCO1-202ENST00000452776 FMN1Q68DA7 1419 aa10.75□□□□□ -0.69
SMCO1-202ENST00000452776 BRD4O60885 1362 aaPredicted RBP10.75□□□□□ -0.69
SMCO1-202ENST00000452776 LRPPRCP42704 1394 aaKnown RBP10.75□□□□□ -0.69
SMCO1-202ENST00000452776 TOP2BQ02880 1626 aa10.74□□□□□ -0.69
SMCO1-202ENST00000452776 CNGB1Q14028 1251 aaPredicted RBP10.74□□□□□ -0.69
SMCO1-202ENST00000452776 C8orf34Q49A92 452 aa10.74□□□□□ -0.69
SMCO1-202ENST00000452776 TAF3Q5VWG9 929 aa10.74□□□□□ -0.69
SMCO1-202ENST00000452776 OFD1O75665 1012 aa10.73□□□□□ -0.69
SMCO1-202ENST00000452776 RGS3P49796 1198 aa10.73□□□□□ -0.69
SMCO1-202ENST00000452776 RALBP1Q15311 655 aa10.73□□□□□ -0.69
SMCO1-202ENST00000452776 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.72□□□□□ -0.69
SMCO1-202ENST00000452776 KIF7Q2M1P5 1343 aa10.72□□□□□ -0.69
SMCO1-202ENST00000452776 KDM2BQ8NHM5 1336 aa10.72□□□□□ -0.69
SMCO1-202ENST00000452776 MIA2Q96PC5 1412 aa10.72□□□□□ -0.69
SMCO1-202ENST00000452776 CANXP27824 592 aaKnown RBP10.72□□□□□ -0.69
SMCO1-202ENST00000452776 ANP32BQ92688 251 aaKnown RBP10.72□□□□□ -0.69
SMCO1-202ENST00000452776 KIAA1211Q6ZU35 1233 aa10.71□□□□□ -0.69
SMCO1-202ENST00000452776 HOMEZQ8IX15 550 aa10.71□□□□□ -0.69
SMCO1-202ENST00000452776 GRPEL1Q9HAV7 217 aa10.71□□□□□ -0.69
SMCO1-202ENST00000452776 POLR1AO95602 1720 aaPredicted RBP10.71□□□□□ -0.69
SMCO1-202ENST00000452776 CCDC144AA2RUR9 1427 aa10.71□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms