RNA–Protein interactions for RNA: ENST00000449880.6

ITGB4-202, Transcript of integrin subunit beta 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGB4, Length 5,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-202ENST00000449880 HSCBQ8IWL3 235 aa17.87■□□□□ 0.45
ITGB4-202ENST00000449880 ARID4BQ4LE39 1312 aaPredicted RBP17.86■□□□□ 0.45
ITGB4-202ENST00000449880 PLEKHG5O94827 1062 aa17.86■□□□□ 0.45
ITGB4-202ENST00000449880 HSP90AB1P08238 724 aaKnown RBP17.85■□□□□ 0.45
ITGB4-202ENST00000449880 GOLGA6L6A8MZA4 724 aa17.85■□□□□ 0.45
ITGB4-202ENST00000449880 RAD54L2Q9Y4B4 1467 aa17.85■□□□□ 0.45
ITGB4-202ENST00000449880 FANCIQ9NVI1 1328 aa17.85■□□□□ 0.45
ITGB4-202ENST00000449880 PNNQ9H307 717 aaKnown RBP17.85■□□□□ 0.45
ITGB4-202ENST00000449880 FTSJ3Q8IY81 847 aaKnown RBP17.84■□□□□ 0.45
ITGB4-202ENST00000449880 CFTRP13569 1480 aa17.84■□□□□ 0.45
ITGB4-202ENST00000449880 CCDC18Q5T9S5 1454 aa17.83■□□□□ 0.44
ITGB4-202ENST00000449880 KNSTRNQ9Y448 316 aa17.83■□□□□ 0.44
ITGB4-202ENST00000449880 MPHOSPH9Q99550 1183 aa17.83■□□□□ 0.44
ITGB4-202ENST00000449880 GAPVD1Q14C86 1478 aa17.82■□□□□ 0.44
ITGB4-202ENST00000449880 RGS3P49796 1198 aa17.82■□□□□ 0.44
ITGB4-202ENST00000449880 HMGXB3Q12766 1538 aa17.81■□□□□ 0.44
ITGB4-202ENST00000449880 ZRSR1Q15695 479 aaKnown RBP17.81■□□□□ 0.44
ITGB4-202ENST00000449880 FOXD1Q16676 465 aa17.81■□□□□ 0.44
ITGB4-202ENST00000449880 DCAF11Q8TEB1 546 aa17.81■□□□□ 0.44
ITGB4-202ENST00000449880 PKD2Q13563 968 aa17.8■□□□□ 0.44
ITGB4-202ENST00000449880 DHX57Q6P158 1386 aaKnown RBP17.8■□□□□ 0.44
ITGB4-202ENST00000449880 HSPA5P11021 654 aaKnown RBP17.8■□□□□ 0.44
ITGB4-202ENST00000449880 SENP3Q9H4L4 574 aaPredicted RBP17.8■□□□□ 0.44
ITGB4-202ENST00000449880 ERICH3Q5RHP9 1530 aa17.79■□□□□ 0.44
ITGB4-202ENST00000449880 ANKRD30AQ9BXX3 1397 aa17.79■□□□□ 0.44
ITGB4-202ENST00000449880 NRDCO43847 1150 aa17.78■□□□□ 0.44
ITGB4-202ENST00000449880 GBP4Q96PP9 640 aa17.77■□□□□ 0.44
ITGB4-202ENST00000449880 TOP2BQ02880 1626 aa17.77■□□□□ 0.44
ITGB4-202ENST00000449880 KANK1Q14678 1352 aa17.76■□□□□ 0.43
ITGB4-202ENST00000449880 JPH4Q96JJ6 628 aa17.76■□□□□ 0.43
ITGB4-202ENST00000449880 BICRAQ9NZM4 1560 aa17.76■□□□□ 0.43
ITGB4-202ENST00000449880 NUDCQ9Y266 331 aa17.74■□□□□ 0.43
ITGB4-202ENST00000449880 GOLGA6L3A6NEY3 463 aa17.73■□□□□ 0.43
ITGB4-202ENST00000449880 NUP155O75694 1391 aa17.72■□□□□ 0.43
ITGB4-202ENST00000449880 MAPK8IP3Q9UPT6 1336 aa17.72■□□□□ 0.43
ITGB4-202ENST00000449880 POGKQ9P215 609 aa17.71■□□□□ 0.43
ITGB4-202ENST00000449880 CUX1P39880 1505 aa17.7■□□□□ 0.42
ITGB4-202ENST00000449880 CC2D2AQ9P2K1 1620 aa17.7■□□□□ 0.42
ITGB4-202ENST00000449880 TMF1P82094 1093 aa17.69■□□□□ 0.42
ITGB4-202ENST00000449880 EFCAB2Q5VUJ9 269 aa17.69■□□□□ 0.42
ITGB4-202ENST00000449880 SENP3-EIF4A1A0A087X0R7 540 aa17.68■□□□□ 0.42
ITGB4-202ENST00000449880 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.68■□□□□ 0.42
ITGB4-202ENST00000449880 HNRNPMP52272 730 aaKnown RBP eCLIP17.67■□□□□ 0.42
ITGB4-202ENST00000449880 RCAN3Q9UKA8 241 aa17.67■□□□□ 0.42
ITGB4-202ENST00000449880 LMOD2Q6P5Q4 547 aa17.67■□□□□ 0.42
ITGB4-202ENST00000449880 PRXQ9BXM0 1461 aa17.66■□□□□ 0.42
ITGB4-202ENST00000449880 RALBP1Q15311 655 aa17.66■□□□□ 0.42
ITGB4-202ENST00000449880 KIAA2012Q0VF49 1180 aa17.65■□□□□ 0.42
ITGB4-202ENST00000449880 HSP90AA2PQ14568 343 aaPredicted RBP17.65■□□□□ 0.42
ITGB4-202ENST00000449880 CC2D1BQ5T0F9 858 aaKnown RBP17.65■□□□□ 0.42
ITGB4-202ENST00000449880 LRRC9Q6ZRR7 1453 aa17.65■□□□□ 0.42
ITGB4-202ENST00000449880 PDE3BQ13370 1112 aa17.65■□□□□ 0.42
ITGB4-202ENST00000449880 ARAP1Q96P48 1450 aa17.64■□□□□ 0.42
ITGB4-202ENST00000449880 RSPH4AQ5TD94 716 aa17.64■□□□□ 0.41
ITGB4-202ENST00000449880 L3MBTL2Q969R5 705 aa17.64■□□□□ 0.41
ITGB4-202ENST00000449880 KTN1Q86UP2 1357 aaKnown RBP17.64■□□□□ 0.41
ITGB4-202ENST00000449880 NPHP1O15259 732 aa17.63■□□□□ 0.41
ITGB4-202ENST00000449880 NESP48681 1621 aa17.63■□□□□ 0.41
ITGB4-202ENST00000449880 AQRO60306 1485 aaKnown RBP eCLIP17.63■□□□□ 0.41
ITGB4-202ENST00000449880 MCCP23508 829 aa17.62■□□□□ 0.41
ITGB4-202ENST00000449880 CASKIN1Q8WXD9 1431 aa17.62■□□□□ 0.41
ITGB4-202ENST00000449880 GSE1Q14687 1217 aa17.62■□□□□ 0.41
ITGB4-202ENST00000449880 HDGFP51858 240 aaKnown RBP17.61■□□□□ 0.41
ITGB4-202ENST00000449880 FRAT1Q92837 279 aaPredicted RBP17.61■□□□□ 0.41
ITGB4-202ENST00000449880 SYAP1Q96A49 352 aaPredicted RBP17.61■□□□□ 0.41
ITGB4-202ENST00000449880 ROCK2O75116 1388 aaKnown RBP17.6■□□□□ 0.41
ITGB4-202ENST00000449880 PHLDB1Q86UU1 1377 aa17.6■□□□□ 0.41
ITGB4-202ENST00000449880 FGD6Q6ZV73 1430 aa17.6■□□□□ 0.41
ITGB4-202ENST00000449880 PLCB2Q00722 1185 aa17.6■□□□□ 0.41
ITGB4-202ENST00000449880 NEUROD2Q15784 382 aa17.6■□□□□ 0.41
ITGB4-202ENST00000449880 TOPBP1Q92547 1522 aa17.58■□□□□ 0.41
ITGB4-202ENST00000449880 PTPRGP23470 1445 aa17.58■□□□□ 0.41
ITGB4-202ENST00000449880 PMFBP1Q8TBY8 1022 aa17.58■□□□□ 0.4
ITGB4-202ENST00000449880 MYOM3Q5VTT5 1437 aa17.58■□□□□ 0.4
ITGB4-202ENST00000449880 DDX11L8A8MPP1 907 aa17.57■□□□□ 0.4
ITGB4-202ENST00000449880 RWDD1Q9H446 243 aaPredicted RBP17.57■□□□□ 0.4
ITGB4-202ENST00000449880 FYCO1Q9BQS8 1478 aa17.56■□□□□ 0.4
ITGB4-202ENST00000449880 PEG3Q9GZU2 1588 aa17.56■□□□□ 0.4
ITGB4-202ENST00000449880 UNC13AQ9UPW8 1703 aa17.56■□□□□ 0.4
ITGB4-202ENST00000449880 GRIN2BQ13224 1484 aa17.56■□□□□ 0.4
ITGB4-202ENST00000449880 GGT6Q6P531 493 aa17.55■□□□□ 0.4
ITGB4-202ENST00000449880 OS9Q13438 667 aaPredicted RBP17.54■□□□□ 0.4
ITGB4-202ENST00000449880 POLA1P09884 1462 aaPredicted RBP17.54■□□□□ 0.4
ITGB4-202ENST00000449880 GOLGA6L4A6NEF3 574 aa17.54■□□□□ 0.4
ITGB4-202ENST00000449880 RRBP1Q9P2E9 1410 aaKnown RBP17.53■□□□□ 0.4
ITGB4-202ENST00000449880 EFCAB5A4FU69 1503 aa17.53■□□□□ 0.4
ITGB4-202ENST00000449880 DNMBPQ6XZF7 1577 aa17.53■□□□□ 0.4
ITGB4-202ENST00000449880 SPAG9O60271 1321 aaKnown RBP17.52■□□□□ 0.4
ITGB4-202ENST00000449880 MRC2Q9UBG0 1479 aa17.52■□□□□ 0.39
ITGB4-202ENST00000449880 U2SURPO15042 1029 aaKnown RBP17.52■□□□□ 0.39
ITGB4-202ENST00000449880 FGD1P98174 961 aa17.51■□□□□ 0.39
ITGB4-202ENST00000449880 NCOA2Q15596 1464 aa17.51■□□□□ 0.39
ITGB4-202ENST00000449880 GOLGA2Q08379 1002 aa17.5■□□□□ 0.39
ITGB4-202ENST00000449880 ZBED9Q6R2W3 1325 aa17.5■□□□□ 0.39
ITGB4-202ENST00000449880 SKOR2Q2VWA4 1001 aaPredicted RBP17.5■□□□□ 0.39
ITGB4-202ENST00000449880 PRDM2Q13029 1718 aa17.5■□□□□ 0.39
ITGB4-202ENST00000449880 IPO8O15397 1037 aaKnown RBP17.5■□□□□ 0.39
ITGB4-202ENST00000449880 DRC7Q8IY82 874 aa17.49■□□□□ 0.39
ITGB4-202ENST00000449880 SLKQ9H2G2 1235 aaPredicted RBP17.49■□□□□ 0.39
ITGB4-202ENST00000449880 KIF3BO15066 747 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms