RNA–Protein interactions for RNA: ENST00000449784.5

COPS7B-214, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 978 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-214ENST00000449784 CUX2O14529 1486 aa16.44■□□□□ 0.22
COPS7B-214ENST00000449784 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.43■□□□□ 0.22
COPS7B-214ENST00000449784 CABP2Q9NPB3 220 aa16.42■□□□□ 0.22
COPS7B-214ENST00000449784 WDR62O43379 1518 aa16.4■□□□□ 0.22
COPS7B-214ENST00000449784 ST18O60284 1047 aa16.36■□□□□ 0.21
COPS7B-214ENST00000449784 URB2Q14146 1524 aaKnown RBP16.35■□□□□ 0.21
COPS7B-214ENST00000449784 C3orf67Q6ZVT6 689 aa16.35■□□□□ 0.21
COPS7B-214ENST00000449784 DPY19L2Q6NUT2 758 aa16.32■□□□□ 0.2
COPS7B-214ENST00000449784 L3MBTL3Q96JM7 780 aaPredicted RBP16.32■□□□□ 0.2
COPS7B-214ENST00000449784 PCDH10Q9P2E7 1040 aa16.31■□□□□ 0.2
COPS7B-214ENST00000449784 ABCC8Q09428 1581 aa16.28■□□□□ 0.2
COPS7B-214ENST00000449784 TOPBP1Q92547 1522 aa16.28■□□□□ 0.2
COPS7B-214ENST00000449784 TRIM41Q8WV44 630 aa16.27■□□□□ 0.2
COPS7B-214ENST00000449784 DNMBPQ6XZF7 1577 aa16.26■□□□□ 0.19
COPS7B-214ENST00000449784 CDAN1Q8IWY9 1227 aa16.23■□□□□ 0.19
COPS7B-214ENST00000449784 G3V3G9 751 aa16.21■□□□□ 0.19
COPS7B-214ENST00000449784 SNPHO15079 494 aa16.21■□□□□ 0.19
COPS7B-214ENST00000449784 EFCAB3Q8N7B9 438 aa16.21■□□□□ 0.19
COPS7B-214ENST00000449784 ILDR1Q86SU0 546 aaPredicted RBP16.2■□□□□ 0.18
COPS7B-214ENST00000449784 CUX1P39880 1505 aa16.19■□□□□ 0.18
COPS7B-214ENST00000449784 MARVELD3Q96A59 401 aa16.18■□□□□ 0.18
COPS7B-214ENST00000449784 RNF25Q96BH1 459 aaPredicted RBP16.18■□□□□ 0.18
COPS7B-214ENST00000449784 POLA1P09884 1462 aaPredicted RBP16.16■□□□□ 0.18
COPS7B-214ENST00000449784 RIOK3O14730 519 aaKnown RBP16.16■□□□□ 0.18
COPS7B-214ENST00000449784 BOLA1Q9Y3E2 137 aa16.16■□□□□ 0.18
COPS7B-214ENST00000449784 IFT140Q96RY7 1462 aa16.16■□□□□ 0.18
COPS7B-214ENST00000449784 WRNQ14191 1432 aaPredicted RBP eCLIP16.15■□□□□ 0.18
COPS7B-214ENST00000449784 FGD5Q6ZNL6 1462 aa16.12■□□□□ 0.17
COPS7B-214ENST00000449784 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.12■□□□□ 0.17
COPS7B-214ENST00000449784 ZFP91Q96JP5 570 aaPredicted RBP16.12■□□□□ 0.17
COPS7B-214ENST00000449784 TMEM121BQ9BXQ6 578 aaPredicted RBP16.1■□□□□ 0.17
COPS7B-214ENST00000449784 SYNJ1O43426 1573 aa16.09■□□□□ 0.17
COPS7B-214ENST00000449784 TOP2BQ02880 1626 aa16.09■□□□□ 0.17
COPS7B-214ENST00000449784 TARBP1Q13395 1621 aaKnown RBP16.08■□□□□ 0.17
COPS7B-214ENST00000449784 BIVM-ERCC5R4GMW8 1640 aa16.08■□□□□ 0.16
COPS7B-214ENST00000449784 RAD54L2Q9Y4B4 1467 aa16.06■□□□□ 0.16
COPS7B-214ENST00000449784 SOGA1O94964 1423 aa16.06■□□□□ 0.16
COPS7B-214ENST00000449784 VGFO15240 615 aaPredicted RBP16.06■□□□□ 0.16
COPS7B-214ENST00000449784 ZNF608Q9ULD9 1512 aaPredicted RBP16.05■□□□□ 0.16
COPS7B-214ENST00000449784 EMP3P54852 163 aa16.02■□□□□ 0.16
COPS7B-214ENST00000449784 PHF8Q9UPP1 1060 aa16■□□□□ 0.15
COPS7B-214ENST00000449784 ABCA10Q8WWZ4 1543 aa15.99■□□□□ 0.15
COPS7B-214ENST00000449784 WDR97A6NE52 1622 aa15.99■□□□□ 0.15
COPS7B-214ENST00000449784 EIF4G3O43432 1585 aaKnown RBP15.99■□□□□ 0.15
COPS7B-214ENST00000449784 AQRO60306 1485 aaKnown RBP eCLIP15.97■□□□□ 0.152e-6■■■■■ 29.8
COPS7B-214ENST00000449784 SOX12O15370 315 aa15.96■□□□□ 0.15
COPS7B-214ENST00000449784 TDRD9Q8NDG6 1382 aaKnown RBP15.96■□□□□ 0.15
COPS7B-214ENST00000449784 MICALL2Q8IY33 904 aa15.95■□□□□ 0.14
COPS7B-214ENST00000449784 MS4A4AQ96JQ5 239 aa15.95■□□□□ 0.14
COPS7B-214ENST00000449784 ECM2O94769 699 aaPredicted RBP15.94■□□□□ 0.14
COPS7B-214ENST00000449784 BCL11BQ9C0K0 894 aaPredicted RBP15.94■□□□□ 0.14
COPS7B-214ENST00000449784 FAM205CA6NFA0 338 aa15.93■□□□□ 0.14
COPS7B-214ENST00000449784 STK24Q9Y6E0 443 aa15.93■□□□□ 0.14
COPS7B-214ENST00000449784 HOXB3P14651 431 aaPredicted RBP15.91■□□□□ 0.14
COPS7B-214ENST00000449784 ABCA5Q8WWZ7 1642 aa15.9■□□□□ 0.14
COPS7B-214ENST00000449784 ZNF710Q8N1W2 664 aa15.9■□□□□ 0.14
COPS7B-214ENST00000449784 GAPVD1Q14C86 1478 aa15.9■□□□□ 0.14
COPS7B-214ENST00000449784 HS3ST6Q96QI5 342 aa15.89■□□□□ 0.13
COPS7B-214ENST00000449784 GRIN2BQ13224 1484 aa15.88■□□□□ 0.13
COPS7B-214ENST00000449784 POTEB3A0JP26 581 aa15.87■□□□□ 0.13
COPS7B-214ENST00000449784 POTEBQ6S5H4 581 aa15.87■□□□□ 0.13
COPS7B-214ENST00000449784 TMEM92Q6UXU6 159 aa15.87■□□□□ 0.13
COPS7B-214ENST00000449784 STK25O00506 426 aa15.86■□□□□ 0.13
COPS7B-214ENST00000449784 TAOK2Q9UL54 1235 aa15.86■□□□□ 0.13
COPS7B-214ENST00000449784 SNAPC4Q5SXM2 1469 aa15.84■□□□□ 0.13
COPS7B-214ENST00000449784 MAGI1Q96QZ7 1491 aaPredicted RBP15.84■□□□□ 0.13
COPS7B-214ENST00000449784 DOK7Q18PE1 504 aa15.83■□□□□ 0.12
COPS7B-214ENST00000449784 NLRP6P59044 892 aa15.82■□□□□ 0.12
COPS7B-214ENST00000449784 RGL2O15211 777 aa15.81■□□□□ 0.12
COPS7B-214ENST00000449784 PKD2Q13563 968 aa15.81■□□□□ 0.12
COPS7B-214ENST00000449784 PBRM1Q86U86 1689 aa15.8■□□□□ 0.12
COPS7B-214ENST00000449784 KIF27Q86VH2 1401 aa15.8■□□□□ 0.12
COPS7B-214ENST00000449784 SPNS2Q8IVW8 549 aa15.8■□□□□ 0.12
COPS7B-214ENST00000449784 ERICH3Q5RHP9 1530 aa15.79■□□□□ 0.12
COPS7B-214ENST00000449784 SYNJ2O15056 1496 aa15.78■□□□□ 0.12
COPS7B-214ENST00000449784 HOXB1P14653 301 aaPredicted RBP15.77■□□□□ 0.12
COPS7B-214ENST00000449784 FBXO22Q8NEZ5 403 aa15.77■□□□□ 0.12
COPS7B-214ENST00000449784 MMRN1Q13201 1228 aa15.76■□□□□ 0.11
COPS7B-214ENST00000449784 MFRPQ9BY79 579 aa15.76■□□□□ 0.11
COPS7B-214ENST00000449784 RIMBP2O15034 1052 aa15.75■□□□□ 0.11
COPS7B-214ENST00000449784 DNAJC5Q9H3Z4 198 aa15.75■□□□□ 0.11
COPS7B-214ENST00000449784 ADAMTS12P58397 1594 aa15.75■□□□□ 0.11
COPS7B-214ENST00000449784 ERBB3P21860 1342 aa15.74■□□□□ 0.11
COPS7B-214ENST00000449784 KRTAP3-3Q9BYR6 98 aa15.73■□□□□ 0.11
COPS7B-214ENST00000449784 KRTAP3-2Q9BYR7 98 aa15.73■□□□□ 0.11
COPS7B-214ENST00000449784 FHAD1B1AJZ9 1412 aa15.73■□□□□ 0.11
COPS7B-214ENST00000449784 IGF1RP08069 1367 aa15.72■□□□□ 0.11
COPS7B-214ENST00000449784 CHD1O14646 1710 aa15.71■□□□□ 0.11
COPS7B-214ENST00000449784 CHMP7Q8WUX9 453 aaPredicted RBP15.71■□□□□ 0.11
COPS7B-214ENST00000449784 GRIN2AQ12879 1464 aa15.68■□□□□ 0.1
COPS7B-214ENST00000449784 RUSC2Q8N2Y8 1516 aa15.67■□□□□ 0.1
COPS7B-214ENST00000449784 VARS2Q5ST30 1063 aaKnown RBP15.66■□□□□ 0.1
COPS7B-214ENST00000449784 CUL7Q14999 1698 aa15.65■□□□□ 0.1
COPS7B-214ENST00000449784 NUP160Q12769 1436 aa15.63■□□□□ 0.09
COPS7B-214ENST00000449784 CLASP1Q7Z460 1538 aa15.62■□□□□ 0.09
COPS7B-214ENST00000449784 CARMIL1Q5VZK9 1371 aa15.62■□□□□ 0.09
COPS7B-214ENST00000449784 ARSIQ5FYB1 569 aa15.6■□□□□ 0.09
COPS7B-214ENST00000449784 GPR153Q6NV75 609 aa15.6■□□□□ 0.09
COPS7B-214ENST00000449784 EEA1Q15075 1411 aa15.6■□□□□ 0.09
COPS7B-214ENST00000449784 KHSRPQ92945 711 aaKnown RBP eCLIP15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms