RNA–Protein interactions for RNA: ENST00000448223.6

SMC6-207, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,233 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-207ENST00000448223 CALRP27797 417 aaKnown RBP11.93□□□□□ -0.5
SMC6-207ENST00000448223 NCAPD3P42695 1498 aa11.93□□□□□ -0.5
SMC6-207ENST00000448223 PLCB2Q00722 1185 aa11.92□□□□□ -0.5
SMC6-207ENST00000448223 CFTRP13569 1480 aa11.92□□□□□ -0.5
SMC6-207ENST00000448223 CADPSQ9ULU8 1353 aa11.91□□□□□ -0.5
SMC6-207ENST00000448223 CCDC18Q5T9S5 1454 aa11.9□□□□□ -0.5
SMC6-207ENST00000448223 MPHOSPH9Q99550 1183 aa11.9□□□□□ -0.5
SMC6-207ENST00000448223 ANO8Q9HCE9 1232 aaPredicted RBP11.9□□□□□ -0.5
SMC6-207ENST00000448223 APPP05067 770 aa11.9□□□□□ -0.51
SMC6-207ENST00000448223 SENP3Q9H4L4 574 aaPredicted RBP11.89□□□□□ -0.51
SMC6-207ENST00000448223 ZRSR1Q15695 479 aaKnown RBP11.88□□□□□ -0.51
SMC6-207ENST00000448223 RAD54L2Q9Y4B4 1467 aa11.88□□□□□ -0.51
SMC6-207ENST00000448223 NRDCO43847 1150 aa11.87□□□□□ -0.51
SMC6-207ENST00000448223 FGD6Q6ZV73 1430 aa11.86□□□□□ -0.51
SMC6-207ENST00000448223 GOLGA6L6A8MZA4 724 aa11.86□□□□□ -0.51
SMC6-207ENST00000448223 PCF11O94913 1555 aaKnown RBP11.86□□□□□ -0.51
SMC6-207ENST00000448223 CFDP1Q9UEE9 299 aaPredicted RBP11.85□□□□□ -0.51
SMC6-207ENST00000448223 HMGXB3Q12766 1538 aa11.85□□□□□ -0.51
SMC6-207ENST00000448223 FMN1Q68DA7 1419 aa11.85□□□□□ -0.51
SMC6-207ENST00000448223 WASHC2AQ641Q2 1341 aa11.85□□□□□ -0.51
SMC6-207ENST00000448223 CARD11Q9BXL7 1154 aa11.84□□□□□ -0.51
SMC6-207ENST00000448223 ZNF644Q9H582 1327 aaPredicted RBP11.83□□□□□ -0.51
SMC6-207ENST00000448223 KIAA2012Q0VF49 1180 aa11.83□□□□□ -0.52
SMC6-207ENST00000448223 PRKRIP1Q9H875 184 aaPredicted RBP11.82□□□□□ -0.52
SMC6-207ENST00000448223 FANCD2Q9BXW9 1451 aa11.81□□□□□ -0.52
SMC6-207ENST00000448223 UACAQ9BZF9 1416 aa11.81□□□□□ -0.52
SMC6-207ENST00000448223 CC2D1BQ5T0F9 858 aaKnown RBP11.81□□□□□ -0.52
SMC6-207ENST00000448223 CASKIN1Q8WXD9 1431 aa11.81□□□□□ -0.52
SMC6-207ENST00000448223 GOLGA6L3A6NEY3 463 aa11.81□□□□□ -0.52
SMC6-207ENST00000448223 MSH5O43196 834 aa11.81□□□□□ -0.52
SMC6-207ENST00000448223 PKD2Q13563 968 aa11.8□□□□□ -0.52
SMC6-207ENST00000448223 DCAF11Q8TEB1 546 aa11.8□□□□□ -0.52
SMC6-207ENST00000448223 MAP3K1Q13233 1512 aa11.8□□□□□ -0.52
SMC6-207ENST00000448223 TPRNQ4KMQ1 711 aa11.8□□□□□ -0.52
SMC6-207ENST00000448223 USP35Q9P2H5 1018 aa11.8□□□□□ -0.52
SMC6-207ENST00000448223 FYCO1Q9BQS8 1478 aa11.8□□□□□ -0.52
SMC6-207ENST00000448223 C11orf95C9JLR9 678 aaPredicted RBP11.79□□□□□ -0.52
SMC6-207ENST00000448223 CHMP7Q8WUX9 453 aaPredicted RBP11.79□□□□□ -0.52
SMC6-207ENST00000448223 TSPY4P0CV99 314 aa11.79□□□□□ -0.52
SMC6-207ENST00000448223 TSPY10P0CW01 314 aa11.79□□□□□ -0.52
SMC6-207ENST00000448223 ZBTB7CA1YPR0 619 aa11.78□□□□□ -0.52
SMC6-207ENST00000448223 MYH16Q9H6N6 1097 aa11.78□□□□□ -0.52
SMC6-207ENST00000448223 HSP90AB1P08238 724 aaKnown RBP11.78□□□□□ -0.52
SMC6-207ENST00000448223 WDR43Q15061 677 aaKnown RBP eCLIP11.77□□□□□ -0.52
SMC6-207ENST00000448223 IPO9Q96P70 1041 aaKnown RBP11.77□□□□□ -0.52
SMC6-207ENST00000448223 ZNF771Q7L3S4 317 aaPredicted RBP11.76□□□□□ -0.53
SMC6-207ENST00000448223 NCOA2Q15596 1464 aa11.76□□□□□ -0.53
SMC6-207ENST00000448223 RGS3P49796 1198 aa11.76□□□□□ -0.53
SMC6-207ENST00000448223 GZF1Q9H116 711 aaPredicted RBP11.76□□□□□ -0.53
SMC6-207ENST00000448223 MYOM3Q5VTT5 1437 aa11.76□□□□□ -0.53
SMC6-207ENST00000448223 SETQ01105 290 aaPredicted RBP11.76□□□□□ -0.53
SMC6-207ENST00000448223 NBPF8Q3BBV2 869 aa11.75□□□□□ -0.53
SMC6-207ENST00000448223 DNAJC5BQ9UF47 199 aa11.75□□□□□ -0.53
SMC6-207ENST00000448223 HFM1A2PYH4 1435 aa11.75□□□□□ -0.53
SMC6-207ENST00000448223 FANCIQ9NVI1 1328 aa11.75□□□□□ -0.53
SMC6-207ENST00000448223 PTPRKQ15262 1439 aa11.74□□□□□ -0.53
SMC6-207ENST00000448223 DRC7Q8IY82 874 aa11.73□□□□□ -0.53
SMC6-207ENST00000448223 NAIPQ13075 1403 aa11.73□□□□□ -0.53
SMC6-207ENST00000448223 PLIN1O60240 522 aa11.73□□□□□ -0.53
SMC6-207ENST00000448223 HSCBQ8IWL3 235 aa11.73□□□□□ -0.53
SMC6-207ENST00000448223 GSE1Q14687 1217 aa11.73□□□□□ -0.53
SMC6-207ENST00000448223 GOLGA6L1Q8N7Z2 621 aa11.72□□□□□ -0.53
SMC6-207ENST00000448223 KIF7Q2M1P5 1343 aa11.72□□□□□ -0.53
SMC6-207ENST00000448223 CHGAP10645 457 aaKnown RBP11.72□□□□□ -0.53
SMC6-207ENST00000448223 CNTLNQ9NXG0 1405 aa11.72□□□□□ -0.53
SMC6-207ENST00000448223 NESP48681 1621 aa11.71□□□□□ -0.53
SMC6-207ENST00000448223 PAK3O75914 559 aaPredicted RBP11.71□□□□□ -0.53
SMC6-207ENST00000448223 EFCAB5A4FU69 1503 aa11.71□□□□□ -0.54
SMC6-207ENST00000448223 ST20-MTHFSA0A0A6YYL1 179 aa11.71□□□□□ -0.54
SMC6-207ENST00000448223 CCDC7Q96M83 1385 aa11.71□□□□□ -0.54
SMC6-207ENST00000448223 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.71□□□□□ -0.546e-7■■■□□ 19.2
SMC6-207ENST00000448223 PLEKHD1A6NEE1 506 aa11.71□□□□□ -0.54
SMC6-207ENST00000448223 POLA1P09884 1462 aaPredicted RBP11.7□□□□□ -0.54
SMC6-207ENST00000448223 AQRO60306 1485 aaKnown RBP eCLIP11.7□□□□□ -0.542e-6■■■□□ 16
SMC6-207ENST00000448223 CFAP43Q8NDM7 1665 aa11.7□□□□□ -0.54
SMC6-207ENST00000448223 ZBED9Q6R2W3 1325 aa11.7□□□□□ -0.54
SMC6-207ENST00000448223 GBP4Q96PP9 640 aa11.7□□□□□ -0.54
SMC6-207ENST00000448223 NEUROD2Q15784 382 aa11.69□□□□□ -0.54
SMC6-207ENST00000448223 FAM13BQ9NYF5 915 aa11.69□□□□□ -0.54
SMC6-207ENST00000448223 PTPN23Q9H3S7 1636 aa11.69□□□□□ -0.54
SMC6-207ENST00000448223 CASC1Q6TDU7 716 aa11.69□□□□□ -0.54
SMC6-207ENST00000448223 EXOC6Q8TAG9 804 aa11.68□□□□□ -0.54
SMC6-207ENST00000448223 NUDCQ9Y266 331 aa11.68□□□□□ -0.54
SMC6-207ENST00000448223 AKNAQ7Z591 1439 aa11.67□□□□□ -0.54
SMC6-207ENST00000448223 SKAP1Q86WV1 359 aa11.67□□□□□ -0.54
SMC6-207ENST00000448223 TOPBP1Q92547 1522 aa11.67□□□□□ -0.54
SMC6-207ENST00000448223 SLC4A3P48751 1232 aa11.67□□□□□ -0.54
SMC6-207ENST00000448223 SPRYD3Q8NCJ5 442 aa11.67□□□□□ -0.54
SMC6-207ENST00000448223 HNRNPMP52272 730 aaKnown RBP eCLIP11.67□□□□□ -0.54
SMC6-207ENST00000448223 PDE4CQ08493 712 aa11.67□□□□□ -0.54
SMC6-207ENST00000448223 NUP155O75694 1391 aa11.66□□□□□ -0.54
SMC6-207ENST00000448223 SLKQ9H2G2 1235 aaPredicted RBP11.65□□□□□ -0.54
SMC6-207ENST00000448223 RCAN3Q9UKA8 241 aa11.65□□□□□ -0.54
SMC6-207ENST00000448223 GAPVD1Q14C86 1478 aa11.65□□□□□ -0.54
SMC6-207ENST00000448223 GOLGA6L4A6NEF3 574 aa11.64□□□□□ -0.55
SMC6-207ENST00000448223 MAP7D2Q96T17 732 aa11.64□□□□□ -0.55
SMC6-207ENST00000448223 PDS5BQ9NTI5 1447 aa11.64□□□□□ -0.55
SMC6-207ENST00000448223 ABCA10Q8WWZ4 1543 aa11.64□□□□□ -0.55
SMC6-207ENST00000448223 UBE2Q2Q8WVN8 375 aa11.64□□□□□ -0.55
SMC6-207ENST00000448223 SUPT6HQ7KZ85 1726 aaKnown RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms