RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 CLCN6P51797 869 aa6.23□□□□□ -1.41
HMGB1P37-201ENST00000439613 PCDHB8Q9UN66 801 aa6.23□□□□□ -1.41
HMGB1P37-201ENST00000439613 CLIP1P30622 1438 aa6.23□□□□□ -1.41
HMGB1P37-201ENST00000439613 VGFO15240 615 aaPredicted RBP6.22□□□□□ -1.41
HMGB1P37-201ENST00000439613 CHGAP10645 457 aaKnown RBP6.22□□□□□ -1.41
HMGB1P37-201ENST00000439613 IFNL1Q8IU54 200 aa6.22□□□□□ -1.41
HMGB1P37-201ENST00000439613 PBRM1Q86U86 1689 aa6.22□□□□□ -1.41
HMGB1P37-201ENST00000439613 GRIN2BQ13224 1484 aa6.22□□□□□ -1.41
HMGB1P37-201ENST00000439613 FHAD1B1AJZ9 1412 aa6.2□□□□□ -1.42
HMGB1P37-201ENST00000439613 AQRO60306 1485 aaKnown RBP eCLIP6.2□□□□□ -1.42
HMGB1P37-201ENST00000439613 PDAP1Q13442 181 aaKnown RBP6.19□□□□□ -1.42
HMGB1P37-201ENST00000439613 MS4A3Q96HJ5 214 aa6.19□□□□□ -1.42
HMGB1P37-201ENST00000439613 CTTNBP2Q8WZ74 1663 aa6.19□□□□□ -1.42
HMGB1P37-201ENST00000439613 EIF4G3O43432 1585 aaKnown RBP6.18□□□□□ -1.42
HMGB1P37-201ENST00000439613 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.18□□□□□ -1.42
HMGB1P37-201ENST00000439613 GALR2O43603 387 aaPredicted RBP6.18□□□□□ -1.42
HMGB1P37-201ENST00000439613 GABBR2O75899 941 aa6.18□□□□□ -1.42
HMGB1P37-201ENST00000439613 PSEN1P49768 467 aa6.18□□□□□ -1.42
HMGB1P37-201ENST00000439613 ZFP91Q96JP5 570 aaPredicted RBP6.18□□□□□ -1.42
HMGB1P37-201ENST00000439613 ZNF608Q9ULD9 1512 aaPredicted RBP6.18□□□□□ -1.42
HMGB1P37-201ENST00000439613 ADAMTS12P58397 1594 aa6.18□□□□□ -1.42
HMGB1P37-201ENST00000439613 MAGI1Q96QZ7 1491 aaPredicted RBP6.17□□□□□ -1.42
HMGB1P37-201ENST00000439613 STK25O00506 426 aa6.17□□□□□ -1.42
HMGB1P37-201ENST00000439613 HS6ST3Q8IZP7 471 aa6.16□□□□□ -1.42
HMGB1P37-201ENST00000439613 VPS8Q8N3P4 1428 aa6.16□□□□□ -1.42
HMGB1P37-201ENST00000439613 EFCAB5A4FU69 1503 aa6.15□□□□□ -1.42
HMGB1P37-201ENST00000439613 TRIM26Q12899 539 aaPredicted RBP6.15□□□□□ -1.42
HMGB1P37-201ENST00000439613 SP7Q8TDD2 431 aaPredicted RBP6.15□□□□□ -1.42
HMGB1P37-201ENST00000439613 BCL11BQ9C0K0 894 aaPredicted RBP6.15□□□□□ -1.42
HMGB1P37-201ENST00000439613 TRPC6Q9Y210 931 aa6.15□□□□□ -1.42
HMGB1P37-201ENST00000439613 STK24Q9Y6E0 443 aa6.15□□□□□ -1.42
HMGB1P37-201ENST00000439613 SYNJ2O15056 1496 aa6.15□□□□□ -1.43
HMGB1P37-201ENST00000439613 SNAPC4Q5SXM2 1469 aa6.15□□□□□ -1.43
HMGB1P37-201ENST00000439613 SLC24A1O60721 1099 aa6.14□□□□□ -1.43
HMGB1P37-201ENST00000439613 RANGAP1P46060 587 aaPredicted RBP6.14□□□□□ -1.43
HMGB1P37-201ENST00000439613 CHMP7Q8WUX9 453 aaPredicted RBP6.14□□□□□ -1.43
HMGB1P37-201ENST00000439613 BBXQ8WY36 941 aaPredicted RBP6.14□□□□□ -1.43
HMGB1P37-201ENST00000439613 ARHGAP35Q9NRY4 1499 aa6.14□□□□□ -1.43
HMGB1P37-201ENST00000439613 TIE1P35590 1138 aa6.13□□□□□ -1.43
HMGB1P37-201ENST00000439613 PLCB2Q00722 1185 aa6.13□□□□□ -1.43
HMGB1P37-201ENST00000439613 CFAP44Q96MT7 982 aa6.13□□□□□ -1.43
HMGB1P37-201ENST00000439613 TMEM106CQ9BVX2 250 aa6.13□□□□□ -1.43
HMGB1P37-201ENST00000439613 GRIN2AQ12879 1464 aa6.13□□□□□ -1.43
HMGB1P37-201ENST00000439613 ARAP1Q96P48 1450 aa6.13□□□□□ -1.43
HMGB1P37-201ENST00000439613 IQGAP2Q13576 1575 aa6.12□□□□□ -1.43
HMGB1P37-201ENST00000439613 PAXIP1Q6ZW49 1069 aaPredicted RBP6.12□□□□□ -1.43
HMGB1P37-201ENST00000439613 KIAA0586Q9BVV6 1533 aa6.12□□□□□ -1.43
HMGB1P37-201ENST00000439613 DNAJC5Q9H3Z4 198 aa6.12□□□□□ -1.43
HMGB1P37-201ENST00000439613 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.12□□□□□ -1.43
HMGB1P37-201ENST00000439613 SAMD9Q5K651 1589 aa6.11□□□□□ -1.43
HMGB1P37-201ENST00000439613 FMN1Q68DA7 1419 aa6.11□□□□□ -1.43
HMGB1P37-201ENST00000439613 BMP2KQ9NSY1 1161 aaPredicted RBP6.11□□□□□ -1.43
HMGB1P37-201ENST00000439613 TTLL13PA6NNM8 815 aa6.1□□□□□ -1.43
HMGB1P37-201ENST00000439613 NKX1-1Q15270 411 aaPredicted RBP6.1□□□□□ -1.43
HMGB1P37-201ENST00000439613 DCBLD2Q96PD2 775 aa6.1□□□□□ -1.43
HMGB1P37-201ENST00000439613 PCGF6Q9BYE7 350 aa6.1□□□□□ -1.43
HMGB1P37-201ENST00000439613 CABP2Q9NPB3 220 aa6.1□□□□□ -1.43
HMGB1P37-201ENST00000439613 MAP3K1Q13233 1512 aa6.09□□□□□ -1.43
HMGB1P37-201ENST00000439613 UGGT2Q9NYU1 1516 aa6.09□□□□□ -1.43
HMGB1P37-201ENST00000439613 HAP1P54257 671 aaPredicted RBP6.09□□□□□ -1.43
HMGB1P37-201ENST00000439613 NUP160Q12769 1436 aa6.08□□□□□ -1.44
HMGB1P37-201ENST00000439613 CASKIN1Q8WXD9 1431 aa6.08□□□□□ -1.44
HMGB1P37-201ENST00000439613 ATMINO43313 823 aaPredicted RBP6.08□□□□□ -1.44
HMGB1P37-201ENST00000439613 GOLGA2Q08379 1002 aa6.08□□□□□ -1.44
HMGB1P37-201ENST00000439613 ASTLQ6HA08 431 aaPredicted RBP6.08□□□□□ -1.44
HMGB1P37-201ENST00000439613 FYCO1Q9BQS8 1478 aa6.08□□□□□ -1.44
HMGB1P37-201ENST00000439613 ATN1P54259 1190 aaPredicted RBP6.07□□□□□ -1.44
HMGB1P37-201ENST00000439613 PPARGC1BQ86YN6 1023 aaKnown RBP6.07□□□□□ -1.44
HMGB1P37-201ENST00000439613 P3H3Q8IVL6 736 aa6.07□□□□□ -1.44
HMGB1P37-201ENST00000439613 EFCAB3Q8N7B9 438 aa6.07□□□□□ -1.44
HMGB1P37-201ENST00000439613 SPRYD3Q8NCJ5 442 aa6.07□□□□□ -1.44
HMGB1P37-201ENST00000439613 TRIM35Q9UPQ4 493 aa6.07□□□□□ -1.44
HMGB1P37-201ENST00000439613 FHOD3Q2V2M9 1422 aa6.07□□□□□ -1.44
HMGB1P37-201ENST00000439613 CEP170Q5SW79 1584 aa6.06□□□□□ -1.44
HMGB1P37-201ENST00000439613 CHD1O14646 1710 aa6.06□□□□□ -1.44
HMGB1P37-201ENST00000439613 SOX12O15370 315 aa6.06□□□□□ -1.44
HMGB1P37-201ENST00000439613 MKRN3Q13064 507 aaKnown RBP6.06□□□□□ -1.44
HMGB1P37-201ENST00000439613 CARMIL2Q6F5E8 1435 aa6.06□□□□□ -1.44
HMGB1P37-201ENST00000439613 JPH4Q96JJ6 628 aa6.05□□□□□ -1.44
HMGB1P37-201ENST00000439613 PCF11O94913 1555 aaKnown RBP6.05□□□□□ -1.44
HMGB1P37-201ENST00000439613 TIAM1Q13009 1591 aa6.05□□□□□ -1.44
HMGB1P37-201ENST00000439613 CFAP43Q8NDM7 1665 aa6.04□□□□□ -1.44
HMGB1P37-201ENST00000439613 KIAA0556O60303 1618 aa6.04□□□□□ -1.44
HMGB1P37-201ENST00000439613 RYDENQ9NUL5 291 aaKnown RBP6.04□□□□□ -1.44
HMGB1P37-201ENST00000439613 ATP1B4Q9UN42 357 aaPredicted RBP6.04□□□□□ -1.44
HMGB1P37-201ENST00000439613 CCDC18Q5T9S5 1454 aa6.03□□□□□ -1.44
HMGB1P37-201ENST00000439613 GTPBP6O43824 516 aaPredicted RBP6.03□□□□□ -1.44
HMGB1P37-201ENST00000439613 POTEIP0CG38 1075 aa6.03□□□□□ -1.44
HMGB1P37-201ENST00000439613 NLRP6P59044 892 aa6.03□□□□□ -1.44
HMGB1P37-201ENST00000439613 PELP1Q8IZL8 1130 aaKnown RBP6.03□□□□□ -1.44
HMGB1P37-201ENST00000439613 DISP1Q96F81 1524 aa6.03□□□□□ -1.44
HMGB1P37-201ENST00000439613 HECW1Q76N89 1606 aa6.03□□□□□ -1.44
HMGB1P37-201ENST00000439613 MFRPQ9BY79 579 aa6.02□□□□□ -1.45
HMGB1P37-201ENST00000439613 TSHZ2Q9NRE2 1034 aa6.02□□□□□ -1.45
HMGB1P37-201ENST00000439613 PHF8Q9UPP1 1060 aa6.02□□□□□ -1.45
HMGB1P37-201ENST00000439613 LRRC9Q6ZRR7 1453 aa6.02□□□□□ -1.45
HMGB1P37-201ENST00000439613 SHROOM2Q13796 1616 aa6.01□□□□□ -1.45
HMGB1P37-201ENST00000439613 KANK4Q5T7N3 995 aaPredicted RBP6.01□□□□□ -1.45
HMGB1P37-201ENST00000439613 IER5LQ5T953 404 aa6.01□□□□□ -1.45
HMGB1P37-201ENST00000439613 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms