RNA–Protein interactions for RNA: ENST00000433083.6

PHC1-201, Transcript of polyhomeotic homolog 1, humanhuman

TSL 1 (best) BASIC

Gene PHC1, Length 5,033 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-201ENST00000433083 RAB3GAP2Q9H2M9 1393 aa14.65□□□□□ -0.06
PHC1-201ENST00000433083 SAFB2Q14151 953 aaKnown RBP eCLIP14.65□□□□□ -0.06
PHC1-201ENST00000433083 ANP32BQ92688 251 aaKnown RBP14.65□□□□□ -0.06
PHC1-201ENST00000433083 RUSC2Q8N2Y8 1516 aa14.64□□□□□ -0.07
PHC1-201ENST00000433083 TNNT2P45379 298 aaPredicted RBP14.64□□□□□ -0.07
PHC1-201ENST00000433083 HDGFL2Q7Z4V5 671 aaPredicted RBP14.64□□□□□ -0.07
PHC1-201ENST00000433083 CFTRP13569 1480 aa14.64□□□□□ -0.07
PHC1-201ENST00000433083 FOXD1Q16676 465 aa14.64□□□□□ -0.07
PHC1-201ENST00000433083 AQRO60306 1485 aaKnown RBP eCLIP14.63□□□□□ -0.07
PHC1-201ENST00000433083 CC2D1BQ5T0F9 858 aaKnown RBP14.63□□□□□ -0.07
PHC1-201ENST00000433083 CC2D2AQ9P2K1 1620 aa14.62□□□□□ -0.07
PHC1-201ENST00000433083 GRIN2BQ13224 1484 aa14.62□□□□□ -0.07
PHC1-201ENST00000433083 U2SURPO15042 1029 aaKnown RBP14.62□□□□□ -0.07
PHC1-201ENST00000433083 NEUROD2Q15784 382 aa14.61□□□□□ -0.07
PHC1-201ENST00000433083 ARXQ96QS3 562 aa14.61□□□□□ -0.07
PHC1-201ENST00000433083 MRC2Q9UBG0 1479 aa14.61□□□□□ -0.07
PHC1-201ENST00000433083 MORC1Q86VD1 984 aa14.61□□□□□ -0.07
PHC1-201ENST00000433083 HMGXB3Q12766 1538 aa14.61□□□□□ -0.07
PHC1-201ENST00000433083 ROCK2O75116 1388 aaKnown RBP14.6□□□□□ -0.07
PHC1-201ENST00000433083 EIF3AQ14152 1382 aaKnown RBP14.6□□□□□ -0.07
PHC1-201ENST00000433083 LAS1LQ9Y4W2 734 aaKnown RBP14.59□□□□□ -0.07
PHC1-201ENST00000433083 HSPA5P11021 654 aaKnown RBP14.57□□□□□ -0.08
PHC1-201ENST00000433083 FTSJ3Q8IY81 847 aaKnown RBP14.57□□□□□ -0.08
PHC1-201ENST00000433083 IFT140Q96RY7 1462 aa14.56□□□□□ -0.08
PHC1-201ENST00000433083 FAM69CQ0P6D2 419 aa14.55□□□□□ -0.08
PHC1-201ENST00000433083 CHMP4BQ9H444 224 aaKnown RBP14.55□□□□□ -0.08
PHC1-201ENST00000433083 SOX12O15370 315 aa14.55□□□□□ -0.08
PHC1-201ENST00000433083 MS4A1P11836 297 aa14.53□□□□□ -0.08
PHC1-201ENST00000433083 DDRGK1Q96HY6 314 aa14.53□□□□□ -0.08
PHC1-201ENST00000433083 NESP48681 1621 aa14.53□□□□□ -0.08
PHC1-201ENST00000433083 PPP4R2Q9NY27 417 aa14.53□□□□□ -0.08
PHC1-201ENST00000433083 PAK3O75914 559 aaPredicted RBP14.52□□□□□ -0.08
PHC1-201ENST00000433083 RBM19Q9Y4C8 960 aaKnown RBP14.52□□□□□ -0.09
PHC1-201ENST00000433083 UACAQ9BZF9 1416 aa14.51□□□□□ -0.09
PHC1-201ENST00000433083 KTN1Q86UP2 1357 aaKnown RBP14.51□□□□□ -0.09
PHC1-201ENST00000433083 TERF2IPQ9NYB0 399 aa14.51□□□□□ -0.09
PHC1-201ENST00000433083 NOP58Q9Y2X3 529 aaKnown RBP14.51□□□□□ -0.09
PHC1-201ENST00000433083 NPHP1O15259 732 aa14.5□□□□□ -0.09
PHC1-201ENST00000433083 L3MBTL2Q969R5 705 aa14.5□□□□□ -0.09
PHC1-201ENST00000433083 CCDC144AA2RUR9 1427 aa14.5□□□□□ -0.09
PHC1-201ENST00000433083 MYOM3Q5VTT5 1437 aa14.49□□□□□ -0.09
PHC1-201ENST00000433083 VGFO15240 615 aaPredicted RBP14.49□□□□□ -0.09
PHC1-201ENST00000433083 RTF1Q92541 710 aaKnown RBP14.49□□□□□ -0.09
PHC1-201ENST00000433083 SENP3-EIF4A1A0A087X0R7 540 aa14.47□□□□□ -0.09
PHC1-201ENST00000433083 TOPBP1Q92547 1522 aa14.47□□□□□ -0.09
PHC1-201ENST00000433083 CSB-PGBD3P0DP91 1061 aa14.46□□□□□ -0.09
PHC1-201ENST00000433083 NUTM2DQ5VT03 806 aaPredicted RBP14.46□□□□□ -0.1
PHC1-201ENST00000433083 TSHZ2Q9NRE2 1034 aa14.46□□□□□ -0.1
PHC1-201ENST00000433083 CCER2I3L3R5 266 aa14.46□□□□□ -0.1
PHC1-201ENST00000433083 RALBP1Q15311 655 aa14.46□□□□□ -0.1
PHC1-201ENST00000433083 PRG4Q92954 1404 aaPredicted RBP14.45□□□□□ -0.1
PHC1-201ENST00000433083 NGDNQ8NEJ9 315 aaKnown RBP14.45□□□□□ -0.1
PHC1-201ENST00000433083 RTN4Q9NQC3 1192 aaKnown RBP14.45□□□□□ -0.1
PHC1-201ENST00000433083 DEKP35659 375 aaKnown RBP14.44□□□□□ -0.1
PHC1-201ENST00000433083 FRAT1Q92837 279 aaPredicted RBP14.44□□□□□ -0.1
PHC1-201ENST00000433083 CASC1Q6TDU7 716 aa14.44□□□□□ -0.1
PHC1-201ENST00000433083 CALD1Q05682 793 aaKnown RBP14.43□□□□□ -0.1
PHC1-201ENST00000433083 CUX1P39880 1505 aa14.43□□□□□ -0.1
PHC1-201ENST00000433083 SYNJ2O15056 1496 aa14.43□□□□□ -0.1
PHC1-201ENST00000433083 BECN1Q14457 450 aa14.41□□□□□ -0.1
PHC1-201ENST00000433083 B4GALNT3Q6L9W6 998 aa14.41□□□□□ -0.1
PHC1-201ENST00000433083 CASKIN1Q8WXD9 1431 aa14.41□□□□□ -0.1
PHC1-201ENST00000433083 POLA1P09884 1462 aaPredicted RBP14.41□□□□□ -0.1
PHC1-201ENST00000433083 CHMP4AQ9BY43 222 aa14.41□□□□□ -0.1
PHC1-201ENST00000433083 ERICH3Q5RHP9 1530 aa14.41□□□□□ -0.1
PHC1-201ENST00000433083 U2AF1L5P0DN76 240 aaPredicted RBP14.41□□□□□ -0.1
PHC1-201ENST00000433083 U2AF1Q01081 240 aaKnown RBP eCLIP14.41□□□□□ -0.1
PHC1-201ENST00000433083 ERICH6BQ5W0A0 696 aa14.4□□□□□ -0.1
PHC1-201ENST00000433083 TRAK1Q9UPV9 953 aa14.4□□□□□ -0.1
PHC1-201ENST00000433083 PRDM2Q13029 1718 aa14.39□□□□□ -0.11
PHC1-201ENST00000433083 OS9Q13438 667 aaPredicted RBP14.39□□□□□ -0.11
PHC1-201ENST00000433083 DNAJC5BQ9UF47 199 aa14.39□□□□□ -0.11
PHC1-201ENST00000433083 DNMBPQ6XZF7 1577 aa14.38□□□□□ -0.11
PHC1-201ENST00000433083 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.38□□□□□ -0.11
PHC1-201ENST00000433083 FGD6Q6ZV73 1430 aa14.38□□□□□ -0.11
PHC1-201ENST00000433083 KIF15Q9NS87 1388 aa14.38□□□□□ -0.11
PHC1-201ENST00000433083 SYNJ1O43426 1573 aa14.37□□□□□ -0.11
PHC1-201ENST00000433083 PEG3Q9GZU2 1588 aa14.37□□□□□ -0.11
PHC1-201ENST00000433083 STAC3Q96MF2 364 aa14.37□□□□□ -0.11
PHC1-201ENST00000433083 SNAPC4Q5SXM2 1469 aa14.37□□□□□ -0.11
PHC1-201ENST00000433083 LAMC3Q9Y6N6 1575 aa14.37□□□□□ -0.11
PHC1-201ENST00000433083 TOP2BQ02880 1626 aa14.36□□□□□ -0.11
PHC1-201ENST00000433083 FYCO1Q9BQS8 1478 aa14.36□□□□□ -0.11
PHC1-201ENST00000433083 TRIM44Q96DX7 344 aaPredicted RBP14.36□□□□□ -0.11
PHC1-201ENST00000433083 KIF21BO75037 1637 aa14.35□□□□□ -0.11
PHC1-201ENST00000433083 CCDC9Q9Y3X0 531 aaKnown RBP14.34□□□□□ -0.11
PHC1-201ENST00000433083 EVC2Q86UK5 1308 aa14.34□□□□□ -0.11
PHC1-201ENST00000433083 ZNF644Q9H582 1327 aaPredicted RBP14.34□□□□□ -0.11
PHC1-201ENST00000433083 IPO8O15397 1037 aaKnown RBP14.34□□□□□ -0.11
PHC1-201ENST00000433083 AMPHP49418 695 aa14.34□□□□□ -0.11
PHC1-201ENST00000433083 LRRC9Q6ZRR7 1453 aa14.34□□□□□ -0.11
PHC1-201ENST00000433083 EFCAB5A4FU69 1503 aa14.33□□□□□ -0.12
PHC1-201ENST00000433083 GOLGA2Q08379 1002 aa14.33□□□□□ -0.12
PHC1-201ENST00000433083 ARHGAP5Q13017 1502 aa14.33□□□□□ -0.12
PHC1-201ENST00000433083 NUTM2FA1L443 756 aa14.32□□□□□ -0.12
PHC1-201ENST00000433083 NCOA2Q15596 1464 aa14.31□□□□□ -0.12
PHC1-201ENST00000433083 DHX57Q6P158 1386 aaKnown RBP14.31□□□□□ -0.12
PHC1-201ENST00000433083 ST20-MTHFSA0A0A6YYL1 179 aa14.31□□□□□ -0.12
PHC1-201ENST00000433083 ANKRD50Q9ULJ7 1429 aa14.3□□□□□ -0.12
PHC1-201ENST00000433083 NLRP13Q86W25 1043 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms