RNA–Protein interactions for RNA: ENST00000427369.6

LRTOMT-206, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best)

Gene LRTOMT, Length 3,299 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-206ENST00000427369 KDM6BO15054 1643 aa16.78■□□□□ 0.28
LRTOMT-206ENST00000427369 LRRIQ1Q96JM4 1722 aa16.77■□□□□ 0.28
LRTOMT-206ENST00000427369 SUPT6HQ7KZ85 1726 aaKnown RBP16.76■□□□□ 0.27
LRTOMT-206ENST00000427369 CTTNBP2Q8WZ74 1663 aa16.76■□□□□ 0.27
LRTOMT-206ENST00000427369 LAS1LQ9Y4W2 734 aaKnown RBP16.74■□□□□ 0.27
LRTOMT-206ENST00000427369 GCC2Q8IWJ2 1684 aa16.73■□□□□ 0.27
LRTOMT-206ENST00000427369 NEFMP07197 916 aa16.72■□□□□ 0.27
LRTOMT-206ENST00000427369 EHBP1L1Q8N3D4 1523 aa16.71■□□□□ 0.27
LRTOMT-206ENST00000427369 SPATA31E1Q6ZUB1 1445 aa16.71■□□□□ 0.27
LRTOMT-206ENST00000427369 GRIN2BQ13224 1484 aa16.71■□□□□ 0.27
LRTOMT-206ENST00000427369 UGGT2Q9NYU1 1516 aa16.71■□□□□ 0.27
LRTOMT-206ENST00000427369 DHX29Q7Z478 1369 aaKnown RBP16.69■□□□□ 0.26
LRTOMT-206ENST00000427369 ABCA10Q8WWZ4 1543 aa16.68■□□□□ 0.26
LRTOMT-206ENST00000427369 ABCA5Q8WWZ7 1642 aa16.68■□□□□ 0.26
LRTOMT-206ENST00000427369 MAGI3Q5TCQ9 1506 aa16.68■□□□□ 0.26
LRTOMT-206ENST00000427369 ANKRD30BQ9BXX2 1392 aa16.68■□□□□ 0.26
LRTOMT-206ENST00000427369 RPRD2Q5VT52 1461 aaKnown RBP16.67■□□□□ 0.26
LRTOMT-206ENST00000427369 CUL7Q14999 1698 aa16.67■□□□□ 0.26
LRTOMT-206ENST00000427369 CC2D2AQ9P2K1 1620 aa16.67■□□□□ 0.26
LRTOMT-206ENST00000427369 TEX14Q8IWB6 1497 aa16.66■□□□□ 0.26
LRTOMT-206ENST00000427369 POLR1AO95602 1720 aaPredicted RBP16.66■□□□□ 0.26
LRTOMT-206ENST00000427369 EXOC6Q8TAG9 804 aa16.66■□□□□ 0.26
LRTOMT-206ENST00000427369 TMC1Q8TDI8 760 aa16.66■□□□□ 0.26
LRTOMT-206ENST00000427369 PNISRQ8TF01 805 aaKnown RBP16.66■□□□□ 0.26
LRTOMT-206ENST00000427369 TCOF1Q13428 1488 aaKnown RBP16.66■□□□□ 0.26
LRTOMT-206ENST00000427369 PDE4AP27815 886 aa16.65■□□□□ 0.26
LRTOMT-206ENST00000427369 FANCD2Q9BXW9 1451 aa16.65■□□□□ 0.26
LRTOMT-206ENST00000427369 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.65■□□□□ 0.26
LRTOMT-206ENST00000427369 ARHGEF11O15085 1522 aa16.65■□□□□ 0.26
LRTOMT-206ENST00000427369 POLA1P09884 1462 aaPredicted RBP16.65■□□□□ 0.26
LRTOMT-206ENST00000427369 SAMD9Q5K651 1589 aa16.64■□□□□ 0.25
LRTOMT-206ENST00000427369 TCERG1O14776 1098 aaKnown RBP16.64■□□□□ 0.25
LRTOMT-206ENST00000427369 ZNF326Q5BKZ1 582 aaKnown RBP16.64■□□□□ 0.25
LRTOMT-206ENST00000427369 SLC4A1APQ9BWU0 796 aaKnown RBP16.64■□□□□ 0.25
LRTOMT-206ENST00000427369 RRP1P56182 461 aaKnown RBP16.62■□□□□ 0.25
LRTOMT-206ENST00000427369 ARID3CA6NKF2 412 aa16.62■□□□□ 0.25
LRTOMT-206ENST00000427369 USP35Q9P2H5 1018 aa16.62■□□□□ 0.25
LRTOMT-206ENST00000427369 THOC2Q8NI27 1593 aaKnown RBP16.62■□□□□ 0.25
LRTOMT-206ENST00000427369 BACH2Q9BYV9 841 aa16.6■□□□□ 0.25
LRTOMT-206ENST00000427369 DNMBPQ6XZF7 1577 aa16.6■□□□□ 0.25
LRTOMT-206ENST00000427369 USP47Q96K76 1375 aa16.59■□□□□ 0.25
LRTOMT-206ENST00000427369 TOPBP1Q92547 1522 aa16.59■□□□□ 0.25
LRTOMT-206ENST00000427369 MIA2Q96PC5 1412 aa16.59■□□□□ 0.25
LRTOMT-206ENST00000427369 BCORL1Q5H9F3 1711 aa16.58■□□□□ 0.25
LRTOMT-206ENST00000427369 PPM1GO15355 546 aaPredicted RBP16.58■□□□□ 0.24
LRTOMT-206ENST00000427369 WASHC2CQ9Y4E1 1318 aa16.57■□□□□ 0.24
LRTOMT-206ENST00000427369 RCAN3Q9UKA8 241 aa16.57■□□□□ 0.24
LRTOMT-206ENST00000427369 TDRD9Q8NDG6 1382 aaKnown RBP16.55■□□□□ 0.24
LRTOMT-206ENST00000427369 BRPF3Q9ULD4 1205 aa16.54■□□□□ 0.24
LRTOMT-206ENST00000427369 MS4A1P11836 297 aa16.54■□□□□ 0.24
LRTOMT-206ENST00000427369 SKAP1Q86WV1 359 aa16.53■□□□□ 0.24
LRTOMT-206ENST00000427369 LRPPRCP42704 1394 aaKnown RBP16.52■□□□□ 0.23
LRTOMT-206ENST00000427369 DAPK1P53355 1430 aa16.51■□□□□ 0.23
LRTOMT-206ENST00000427369 CDK13Q14004 1512 aaKnown RBP16.51■□□□□ 0.23
LRTOMT-206ENST00000427369 ZNF644Q9H582 1327 aaPredicted RBP16.51■□□□□ 0.23
LRTOMT-206ENST00000427369 EPRSP07814 1512 aaKnown RBP16.5■□□□□ 0.23
LRTOMT-206ENST00000427369 ROCK1Q13464 1354 aa16.49■□□□□ 0.23
LRTOMT-206ENST00000427369 KIF15Q9NS87 1388 aa16.49■□□□□ 0.23
LRTOMT-206ENST00000427369 GSE1Q14687 1217 aa16.49■□□□□ 0.23
LRTOMT-206ENST00000427369 PLIN1O60240 522 aa16.49■□□□□ 0.23
LRTOMT-206ENST00000427369 ARID4BQ4LE39 1312 aaPredicted RBP16.49■□□□□ 0.23
LRTOMT-206ENST00000427369 MYBBP1AQ9BQG0 1328 aaKnown RBP16.48■□□□□ 0.23
LRTOMT-206ENST00000427369 ABCC5O15440 1437 aa16.48■□□□□ 0.23
LRTOMT-206ENST00000427369 SLC4A3P48751 1232 aa16.48■□□□□ 0.23
LRTOMT-206ENST00000427369 BRD4O60885 1362 aaPredicted RBP16.48■□□□□ 0.23
LRTOMT-206ENST00000427369 DDRGK1Q96HY6 314 aa16.48■□□□□ 0.23
LRTOMT-206ENST00000427369 NESP48681 1621 aa16.47■□□□□ 0.23
LRTOMT-206ENST00000427369 ROCK2O75116 1388 aaKnown RBP16.47■□□□□ 0.23
LRTOMT-206ENST00000427369 MBD5Q9P267 1494 aa16.47■□□□□ 0.23
LRTOMT-206ENST00000427369 NFKBIBQ15653 356 aa16.46■□□□□ 0.23
LRTOMT-206ENST00000427369 CDCA7LQ96GN5 454 aa16.46■□□□□ 0.23
LRTOMT-206ENST00000427369 KDM5CP41229 1560 aa16.46■□□□□ 0.23
LRTOMT-206ENST00000427369 KIF21AQ7Z4S6 1674 aa16.45■□□□□ 0.22
LRTOMT-206ENST00000427369 CARD11Q9BXL7 1154 aa16.45■□□□□ 0.22
LRTOMT-206ENST00000427369 GAPVD1Q14C86 1478 aa16.45■□□□□ 0.22
LRTOMT-206ENST00000427369 PZPP20742 1482 aa16.45■□□□□ 0.22
LRTOMT-206ENST00000427369 RALBP1Q15311 655 aa16.44■□□□□ 0.22
LRTOMT-206ENST00000427369 FRAT1Q92837 279 aaPredicted RBP16.43■□□□□ 0.22
LRTOMT-206ENST00000427369 CRBNQ96SW2 442 aa16.43■□□□□ 0.22
LRTOMT-206ENST00000427369 ST20-MTHFSA0A0A6YYL1 179 aa16.43■□□□□ 0.22
LRTOMT-206ENST00000427369 PKD2Q13563 968 aa16.43■□□□□ 0.22
LRTOMT-206ENST00000427369 KIF14Q15058 1648 aa16.42■□□□□ 0.22
LRTOMT-206ENST00000427369 DNMT1P26358 1616 aaKnown RBP16.42■□□□□ 0.22
LRTOMT-206ENST00000427369 PDE3BQ13370 1112 aa16.42■□□□□ 0.22
LRTOMT-206ENST00000427369 DAXXQ9UER7 740 aaPredicted RBP16.42■□□□□ 0.22
LRTOMT-206ENST00000427369 EIF5BO60841 1220 aaKnown RBP16.41■□□□□ 0.22
LRTOMT-206ENST00000427369 LAMC3Q9Y6N6 1575 aa16.41■□□□□ 0.22
LRTOMT-206ENST00000427369 KDM2AQ9Y2K7 1162 aa16.41■□□□□ 0.22
LRTOMT-206ENST00000427369 KIAA1107Q9UPP5 1409 aa16.4■□□□□ 0.22
LRTOMT-206ENST00000427369 SLC24A1O60721 1099 aa16.39■□□□□ 0.21
LRTOMT-206ENST00000427369 NLRP13Q86W25 1043 aa16.38■□□□□ 0.21
LRTOMT-206ENST00000427369 URB2Q14146 1524 aaKnown RBP16.38■□□□□ 0.21
LRTOMT-206ENST00000427369 KTN1Q86UP2 1357 aaKnown RBP16.37■□□□□ 0.21
LRTOMT-206ENST00000427369 WDR62O43379 1518 aa16.36■□□□□ 0.21
LRTOMT-206ENST00000427369 RALGAPBQ86X10 1494 aa16.36■□□□□ 0.21
LRTOMT-206ENST00000427369 C20orf194Q5TEA3 1177 aa16.35■□□□□ 0.21
LRTOMT-206ENST00000427369 UBE2Q2Q8WVN8 375 aa16.35■□□□□ 0.21
LRTOMT-206ENST00000427369 ZNF777Q9ULD5 760 aaPredicted RBP16.33■□□□□ 0.2
LRTOMT-206ENST00000427369 UHRF1BP1Q6BDS2 1440 aa16.33■□□□□ 0.2
LRTOMT-206ENST00000427369 FRAT2O75474 233 aaPredicted RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms