RNA–Protein interactions for RNA: ENST00000426658.6

CTCFL-206, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 3,996 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-206ENST00000426658 KIF7Q2M1P5 1343 aa13.65□□□□□ -0.22
CTCFL-206ENST00000426658 LAS1LQ9Y4W2 734 aaKnown RBP13.65□□□□□ -0.22
CTCFL-206ENST00000426658 PTPN23Q9H3S7 1636 aa13.64□□□□□ -0.23
CTCFL-206ENST00000426658 CHGAP10645 457 aaKnown RBP13.64□□□□□ -0.23
CTCFL-206ENST00000426658 AQRO60306 1485 aaKnown RBP eCLIP13.63□□□□□ -0.233e-6■■■□□ 17.6
CTCFL-206ENST00000426658 AKNAQ7Z591 1439 aa13.63□□□□□ -0.23
CTCFL-206ENST00000426658 NEFMP07197 916 aa13.63□□□□□ -0.23
CTCFL-206ENST00000426658 RTN4Q9NQC3 1192 aaKnown RBP13.63□□□□□ -0.23
CTCFL-206ENST00000426658 RAD54L2Q9Y4B4 1467 aa13.62□□□□□ -0.23
CTCFL-206ENST00000426658 ESF1Q9H501 851 aaKnown RBP13.62□□□□□ -0.23
CTCFL-206ENST00000426658 CFDP1Q9UEE9 299 aaPredicted RBP13.62□□□□□ -0.23
CTCFL-206ENST00000426658 CARD11Q9BXL7 1154 aa13.62□□□□□ -0.23
CTCFL-206ENST00000426658 NBPF8Q3BBV2 869 aa13.6□□□□□ -0.23
CTCFL-206ENST00000426658 NCOA1Q15788 1441 aa13.59□□□□□ -0.23
CTCFL-206ENST00000426658 SMG6Q86US8 1419 aaKnown RBP13.59□□□□□ -0.23
CTCFL-206ENST00000426658 FANCD2Q9BXW9 1451 aa13.57□□□□□ -0.24
CTCFL-206ENST00000426658 PPM1GO15355 546 aaPredicted RBP13.57□□□□□ -0.24
CTCFL-206ENST00000426658 TCERG1O14776 1098 aaKnown RBP13.57□□□□□ -0.24
CTCFL-206ENST00000426658 TSPY4P0CV99 314 aa13.57□□□□□ -0.24
CTCFL-206ENST00000426658 TSPY10P0CW01 314 aa13.57□□□□□ -0.24
CTCFL-206ENST00000426658 PKD2Q13563 968 aa13.55□□□□□ -0.24
CTCFL-206ENST00000426658 DCAF11Q8TEB1 546 aa13.54□□□□□ -0.24
CTCFL-206ENST00000426658 CC2D1BQ5T0F9 858 aaKnown RBP13.54□□□□□ -0.24
CTCFL-206ENST00000426658 RCAN3Q9UKA8 241 aa13.54□□□□□ -0.24
CTCFL-206ENST00000426658 EXOC6Q8TAG9 804 aa13.53□□□□□ -0.24
CTCFL-206ENST00000426658 PLEKHG5O94827 1062 aa13.53□□□□□ -0.24
CTCFL-206ENST00000426658 DDRGK1Q96HY6 314 aa13.53□□□□□ -0.24
CTCFL-206ENST00000426658 ZNF644Q9H582 1327 aaPredicted RBP13.53□□□□□ -0.24
CTCFL-206ENST00000426658 EHBP1L1Q8N3D4 1523 aa13.52□□□□□ -0.24
CTCFL-206ENST00000426658 PDE4AP27815 886 aa13.52□□□□□ -0.24
CTCFL-206ENST00000426658 RRP1P56182 461 aaKnown RBP13.52□□□□□ -0.25
CTCFL-206ENST00000426658 CANXP27824 592 aaKnown RBP13.51□□□□□ -0.25
CTCFL-206ENST00000426658 USP47Q96K76 1375 aa13.51□□□□□ -0.25
CTCFL-206ENST00000426658 SUPT6HQ7KZ85 1726 aaKnown RBP13.51□□□□□ -0.25
CTCFL-206ENST00000426658 ANO8Q9HCE9 1232 aaPredicted RBP13.51□□□□□ -0.25
CTCFL-206ENST00000426658 STAG3Q9UJ98 1225 aa13.51□□□□□ -0.25
CTCFL-206ENST00000426658 USP35Q9P2H5 1018 aa13.5□□□□□ -0.25
CTCFL-206ENST00000426658 IL27Q8NEV9 243 aa13.5□□□□□ -0.25
CTCFL-206ENST00000426658 ARID4BQ4LE39 1312 aaPredicted RBP13.5□□□□□ -0.25
CTCFL-206ENST00000426658 PNISRQ8TF01 805 aaKnown RBP13.49□□□□□ -0.25
CTCFL-206ENST00000426658 ABCA10Q8WWZ4 1543 aa13.49□□□□□ -0.25
CTCFL-206ENST00000426658 POLA1P09884 1462 aaPredicted RBP13.49□□□□□ -0.25
CTCFL-206ENST00000426658 SNAPC4Q5SXM2 1469 aa13.49□□□□□ -0.25
CTCFL-206ENST00000426658 ARXQ96QS3 562 aa13.48□□□□□ -0.25
CTCFL-206ENST00000426658 ANKRD30BQ9BXX2 1392 aa13.48□□□□□ -0.25
CTCFL-206ENST00000426658 PRKCSHP14314 528 aaPredicted RBP13.47□□□□□ -0.25
CTCFL-206ENST00000426658 CYB5RLQ6IPT4 315 aa13.47□□□□□ -0.25
CTCFL-206ENST00000426658 EIF5BO60841 1220 aaKnown RBP13.47□□□□□ -0.25
CTCFL-206ENST00000426658 ROCK2O75116 1388 aaKnown RBP13.47□□□□□ -0.25
CTCFL-206ENST00000426658 RALBP1Q15311 655 aa13.47□□□□□ -0.25
CTCFL-206ENST00000426658 PLEKHD1A6NEE1 506 aa13.46□□□□□ -0.25
CTCFL-206ENST00000426658 KIF15Q9NS87 1388 aa13.46□□□□□ -0.25
CTCFL-206ENST00000426658 MLECQ14165 292 aa13.45□□□□□ -0.26
CTCFL-206ENST00000426658 MYBBP1AQ9BQG0 1328 aaKnown RBP13.45□□□□□ -0.26
CTCFL-206ENST00000426658 TOPBP1Q92547 1522 aa13.45□□□□□ -0.26
CTCFL-206ENST00000426658 KDM5BQ9UGL1 1544 aa13.45□□□□□ -0.26
CTCFL-206ENST00000426658 MS4A1P11836 297 aa13.45□□□□□ -0.26
CTCFL-206ENST00000426658 WDR43Q15061 677 aaKnown RBP eCLIP13.45□□□□□ -0.26
CTCFL-206ENST00000426658 RPRD2Q5VT52 1461 aaKnown RBP13.44□□□□□ -0.26
CTCFL-206ENST00000426658 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.44□□□□□ -0.26
CTCFL-206ENST00000426658 RGS3P49796 1198 aa13.44□□□□□ -0.26
CTCFL-206ENST00000426658 GRIN2BQ13224 1484 aa13.44□□□□□ -0.26
CTCFL-206ENST00000426658 MIA2Q96PC5 1412 aa13.43□□□□□ -0.26
CTCFL-206ENST00000426658 CUL7Q14999 1698 aa13.43□□□□□ -0.26
CTCFL-206ENST00000426658 ST20-MTHFSA0A0A6YYL1 179 aa13.43□□□□□ -0.26
CTCFL-206ENST00000426658 PDE3BQ13370 1112 aa13.43□□□□□ -0.26
CTCFL-206ENST00000426658 RNF123Q5XPI4 1314 aa13.43□□□□□ -0.26
CTCFL-206ENST00000426658 UGGT2Q9NYU1 1516 aa13.42□□□□□ -0.26
CTCFL-206ENST00000426658 DNMBPQ6XZF7 1577 aa13.42□□□□□ -0.26
CTCFL-206ENST00000426658 PLIN1O60240 522 aa13.42□□□□□ -0.26
CTCFL-206ENST00000426658 BACH2Q9BYV9 841 aa13.42□□□□□ -0.26
CTCFL-206ENST00000426658 GAPVD1Q14C86 1478 aa13.41□□□□□ -0.26
CTCFL-206ENST00000426658 NLRP13Q86W25 1043 aa13.41□□□□□ -0.26
CTCFL-206ENST00000426658 NESP48681 1621 aa13.4□□□□□ -0.26
CTCFL-206ENST00000426658 NUP155O75694 1391 aa13.4□□□□□ -0.26
CTCFL-206ENST00000426658 HECW1Q76N89 1606 aa13.4□□□□□ -0.26
CTCFL-206ENST00000426658 KTN1Q86UP2 1357 aaKnown RBP13.4□□□□□ -0.26
CTCFL-206ENST00000426658 BRD4O60885 1362 aaPredicted RBP13.39□□□□□ -0.27
CTCFL-206ENST00000426658 DHX29Q7Z478 1369 aaKnown RBP13.39□□□□□ -0.27
CTCFL-206ENST00000426658 CTTNBP2Q8WZ74 1663 aa13.38□□□□□ -0.27
CTCFL-206ENST00000426658 DAPK1P53355 1430 aa13.38□□□□□ -0.27
CTCFL-206ENST00000426658 TCOF1Q13428 1488 aaKnown RBP13.38□□□□□ -0.27
CTCFL-206ENST00000426658 PDS5BQ9NTI5 1447 aa13.38□□□□□ -0.27
CTCFL-206ENST00000426658 GSE1Q14687 1217 aa13.38□□□□□ -0.27
CTCFL-206ENST00000426658 SLC4A3P48751 1232 aa13.38□□□□□ -0.27
CTCFL-206ENST00000426658 NEUROD2Q15784 382 aa13.38□□□□□ -0.27
CTCFL-206ENST00000426658 CRBNQ96SW2 442 aa13.38□□□□□ -0.27
CTCFL-206ENST00000426658 ROCK1Q13464 1354 aa13.37□□□□□ -0.27
CTCFL-206ENST00000426658 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.37□□□□□ -0.27
CTCFL-206ENST00000426658 THOC2Q8NI27 1593 aaKnown RBP13.37□□□□□ -0.27
CTCFL-206ENST00000426658 EPRSP07814 1512 aaKnown RBP13.36□□□□□ -0.27
CTCFL-206ENST00000426658 SPATA31E1Q6ZUB1 1445 aa13.36□□□□□ -0.27
CTCFL-206ENST00000426658 CDCA7LQ96GN5 454 aa13.36□□□□□ -0.27
CTCFL-206ENST00000426658 HNRNPMP52272 730 aaKnown RBP eCLIP13.36□□□□□ -0.27
CTCFL-206ENST00000426658 CDK13Q14004 1512 aaKnown RBP13.36□□□□□ -0.27
CTCFL-206ENST00000426658 DENND4BO75064 1496 aaPredicted RBP13.35□□□□□ -0.27
CTCFL-206ENST00000426658 PRDM2Q13029 1718 aa13.35□□□□□ -0.27
CTCFL-206ENST00000426658 TEX14Q8IWB6 1497 aa13.34□□□□□ -0.27
CTCFL-206ENST00000426658 TNNT2P45379 298 aaPredicted RBP13.34□□□□□ -0.27
CTCFL-206ENST00000426658 KNSTRNQ9Y448 316 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms